RNA–Protein interactions for RNA: ENST00000438097.6

UBE3A-204, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 8,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-204ENST00000438097 CDCA8Q53HL2 280 aa18.32■□□□□ 0.52
UBE3A-204ENST00000438097 P3H3Q8IVL6 736 aa18.31■□□□□ 0.52
UBE3A-204ENST00000438097 CFAP53Q96M91 514 aa18.29■□□□□ 0.52
UBE3A-204ENST00000438097 PTMAP06454 111 aaKnown RBP18.29■□□□□ 0.52
UBE3A-204ENST00000438097 FAM9BQ8IZU0 186 aa18.28■□□□□ 0.52
UBE3A-204ENST00000438097 FKBP8Q14318 412 aa18.28■□□□□ 0.52
UBE3A-204ENST00000438097 EIF4G2P78344 907 aaKnown RBP eCLIP18.27■□□□□ 0.52
UBE3A-204ENST00000438097 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.26■□□□□ 0.519e-8■■■□□ 14.6
UBE3A-204ENST00000438097 GOLGA2Q08379 1002 aa18.26■□□□□ 0.51
UBE3A-204ENST00000438097 DNTTIP2Q5QJE6 756 aaKnown RBP18.24■□□□□ 0.51
UBE3A-204ENST00000438097 FTSJ3Q8IY81 847 aaKnown RBP18.23■□□□□ 0.51
UBE3A-204ENST00000438097 ARXQ96QS3 562 aa18.23■□□□□ 0.51
UBE3A-204ENST00000438097 MTUS2Q5JR59 1369 aa18.23■□□□□ 0.51
UBE3A-204ENST00000438097 RSF1Q96T23 1441 aaPredicted RBP18.22■□□□□ 0.51
UBE3A-204ENST00000438097 PNNQ9H307 717 aaKnown RBP18.21■□□□□ 0.51
UBE3A-204ENST00000438097 ZBTB7CA1YPR0 619 aa18.19■□□□□ 0.5
UBE3A-204ENST00000438097 NBR1Q14596 966 aa18.19■□□□□ 0.5
UBE3A-204ENST00000438097 CSRNP3Q8WYN3 585 aa18.19■□□□□ 0.5
UBE3A-204ENST00000438097 CHAF1AQ13111 956 aaPredicted RBP18.19■□□□□ 0.5
UBE3A-204ENST00000438097 KAT6BQ8WYB5 2073 aa18.18■□□□□ 0.5
UBE3A-204ENST00000438097 TULP1O00294 542 aaPredicted RBP18.17■□□□□ 0.5
UBE3A-204ENST00000438097 CFAP44Q96MT7 982 aa18.16■□□□□ 0.5
UBE3A-204ENST00000438097 RB1CC1Q8TDY2 1594 aa18.16■□□□□ 0.5
UBE3A-204ENST00000438097 KIAA2012Q0VF49 1180 aa18.15■□□□□ 0.5
UBE3A-204ENST00000438097 MS4A1P11836 297 aa18.15■□□□□ 0.5
UBE3A-204ENST00000438097 MRS2Q9HD23 443 aa18.15■□□□□ 0.5
UBE3A-204ENST00000438097 FGD1P98174 961 aa18.14■□□□□ 0.49
UBE3A-204ENST00000438097 SALL2Q9Y467 1007 aaPredicted RBP18.13■□□□□ 0.49
UBE3A-204ENST00000438097 CHMP7Q8WUX9 453 aaPredicted RBP18.12■□□□□ 0.49
UBE3A-204ENST00000438097 ARID4BQ4LE39 1312 aaPredicted RBP18.11■□□□□ 0.49
UBE3A-204ENST00000438097 KNSTRNQ9Y448 316 aa18.1■□□□□ 0.49
UBE3A-204ENST00000438097 CLSTN1O94985 981 aa18.09■□□□□ 0.49
UBE3A-204ENST00000438097 ERICH6BQ5W0A0 696 aa18.08■□□□□ 0.48
UBE3A-204ENST00000438097 MAPK8IP3Q9UPT6 1336 aa18.08■□□□□ 0.48
UBE3A-204ENST00000438097 KDM2AQ9Y2K7 1162 aa18.06■□□□□ 0.48
UBE3A-204ENST00000438097 DCAF1Q9Y4B6 1507 aa18.06■□□□□ 0.48
UBE3A-204ENST00000438097 OS9Q13438 667 aaPredicted RBP18.05■□□□□ 0.48
UBE3A-204ENST00000438097 NUDCQ9Y266 331 aa18.05■□□□□ 0.48
UBE3A-204ENST00000438097 KCNJ4P48050 445 aa18.05■□□□□ 0.48
UBE3A-204ENST00000438097 DDX10Q13206 875 aaKnown RBP18.04■□□□□ 0.48
UBE3A-204ENST00000438097 MCCP23508 829 aa18.03■□□□□ 0.48
UBE3A-204ENST00000438097 GOLGA6L4A6NEF3 574 aa18.02■□□□□ 0.47
UBE3A-204ENST00000438097 TMX4Q9H1E5 349 aaPredicted RBP18.02■□□□□ 0.47
UBE3A-204ENST00000438097 USP35Q9P2H5 1018 aa18.02■□□□□ 0.47
UBE3A-204ENST00000438097 HDGFP51858 240 aaKnown RBP18■□□□□ 0.47
UBE3A-204ENST00000438097 KANK1Q14678 1352 aa17.98■□□□□ 0.47
UBE3A-204ENST00000438097 NOC3LQ8WTT2 800 aaKnown RBP17.97■□□□□ 0.47
UBE3A-204ENST00000438097 GNL2Q13823 731 aaKnown RBP17.97■□□□□ 0.47
UBE3A-204ENST00000438097 PPM1GO15355 546 aaPredicted RBP17.95■□□□□ 0.46
UBE3A-204ENST00000438097 PTMSP20962 102 aa17.95■□□□□ 0.46
UBE3A-204ENST00000438097 CCDC34Q96HJ3 373 aa17.95■□□□□ 0.46
UBE3A-204ENST00000438097 HSP90AB1P08238 724 aaKnown RBP17.95■□□□□ 0.46
UBE3A-204ENST00000438097 CHIC2Q9UKJ5 165 aa17.94■□□□□ 0.46
UBE3A-204ENST00000438097 CHMP4AQ9BY43 222 aa17.93■□□□□ 0.46
UBE3A-204ENST00000438097 ERCC6Q03468 1493 aa17.93■□□□□ 0.46
UBE3A-204ENST00000438097 NAP1L2Q9ULW6 460 aaPredicted RBP17.92■□□□□ 0.46
UBE3A-204ENST00000438097 PLEKHD1A6NEE1 506 aa17.92■□□□□ 0.46
UBE3A-204ENST00000438097 PLEKHG5O94827 1062 aa17.91■□□□□ 0.46
UBE3A-204ENST00000438097 NCBP3Q53F19 620 aaKnown RBP17.9■□□□□ 0.46
UBE3A-204ENST00000438097 POGKQ9P215 609 aa17.9■□□□□ 0.46
UBE3A-204ENST00000438097 CLIP1P30622 1438 aa17.89■□□□□ 0.46
UBE3A-204ENST00000438097 EEA1Q15075 1411 aa17.89■□□□□ 0.45
UBE3A-204ENST00000438097 HTATSF1O43719 755 aaKnown RBP17.88■□□□□ 0.45
UBE3A-204ENST00000438097 MSNP26038 577 aaKnown RBP17.87■□□□□ 0.45
UBE3A-204ENST00000438097 DRC7Q8IY82 874 aa17.87■□□□□ 0.45
UBE3A-204ENST00000438097 HSCBQ8IWL3 235 aa17.86■□□□□ 0.45
UBE3A-204ENST00000438097 LMOD2Q6P5Q4 547 aa17.85■□□□□ 0.45
UBE3A-204ENST00000438097 PRM3Q9NNZ6 103 aa17.85■□□□□ 0.45
UBE3A-204ENST00000438097 PLCB2Q00722 1185 aa17.85■□□□□ 0.45
UBE3A-204ENST00000438097 LAS1LQ9Y4W2 734 aaKnown RBP17.84■□□□□ 0.45
UBE3A-204ENST00000438097 NAP1L5Q96NT1 182 aaPredicted RBP17.84■□□□□ 0.45
UBE3A-204ENST00000438097 ISY1Q9ULR0 285 aaKnown RBP17.84■□□□□ 0.45
UBE3A-204ENST00000438097 GOLGA3Q08378 1498 aa17.84■□□□□ 0.45
UBE3A-204ENST00000438097 ZCCHC6Q5VYS8 1495 aaKnown RBP17.83■□□□□ 0.44
UBE3A-204ENST00000438097 TPM4P67936 248 aa17.82■□□□□ 0.44
UBE3A-204ENST00000438097 KIAA1211Q6ZU35 1233 aa17.82■□□□□ 0.44
UBE3A-204ENST00000438097 CALD1Q05682 793 aaKnown RBP17.81■□□□□ 0.44
UBE3A-204ENST00000438097 GPATCH3Q96I76 525 aa17.8■□□□□ 0.44
UBE3A-204ENST00000438097 GOLGA6L1Q8N7Z2 621 aa17.78■□□□□ 0.44
UBE3A-204ENST00000438097 SYAP1Q96A49 352 aaPredicted RBP17.78■□□□□ 0.44
UBE3A-204ENST00000438097 TPRNQ4KMQ1 711 aa17.78■□□□□ 0.44
UBE3A-204ENST00000438097 HDAC5Q9UQL6 1122 aa17.78■□□□□ 0.44
UBE3A-204ENST00000438097 NACADO15069 1562 aa17.77■□□□□ 0.44
UBE3A-204ENST00000438097 KCNH8Q96L42 1107 aa17.77■□□□□ 0.43
UBE3A-204ENST00000438097 RTF1Q92541 710 aaKnown RBP17.76■□□□□ 0.43
UBE3A-204ENST00000438097 TAOK2Q9UL54 1235 aa17.74■□□□□ 0.43
UBE3A-204ENST00000438097 A0A0U1RQG5 324 aaPredicted RBP17.74■□□□□ 0.43
UBE3A-204ENST00000438097 CFDP1Q9UEE9 299 aaPredicted RBP17.73■□□□□ 0.43
UBE3A-204ENST00000438097 FHAD1B1AJZ9 1412 aa17.73■□□□□ 0.43
UBE3A-204ENST00000438097 CARD11Q9BXL7 1154 aa17.73■□□□□ 0.43
UBE3A-204ENST00000438097 BAZ1BQ9UIG0 1483 aaKnown RBP17.73■□□□□ 0.43
UBE3A-204ENST00000438097 CSPP1Q1MSJ5 1256 aa17.72■□□□□ 0.43
UBE3A-204ENST00000438097 KRI1Q8N9T8 703 aaKnown RBP17.72■□□□□ 0.43
UBE3A-204ENST00000438097 CEP89Q96ST8 783 aa17.71■□□□□ 0.43
UBE3A-204ENST00000438097 KIF27Q86VH2 1401 aa17.7■□□□□ 0.42
UBE3A-204ENST00000438097 IPO8O15397 1037 aaKnown RBP17.7■□□□□ 0.42
UBE3A-204ENST00000438097 EIF3AQ14152 1382 aaKnown RBP17.69■□□□□ 0.42
UBE3A-204ENST00000438097 RRP7BPQ9NSQ0 103 aa17.68■□□□□ 0.42
UBE3A-204ENST00000438097 GBP4Q96PP9 640 aa17.66■□□□□ 0.42
UBE3A-204ENST00000438097 RGL3Q3MIN7 710 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms