RNA–Protein interactions for RNA: ENST00000436436.5

R3HDM1-207, Transcript of R3H domain containing 1, humanhuman

TSL 4

Gene R3HDM1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-207ENST00000436436 FBXO3Q9UK99 471 aa9.48□□□□□ -0.89
R3HDM1-207ENST00000436436 MS4A3Q96HJ5 214 aa9.47□□□□□ -0.89
R3HDM1-207ENST00000436436 RASEFQ8IZ41 740 aa9.45□□□□□ -0.9
R3HDM1-207ENST00000436436 KIF12Q96FN5 646 aa9.44□□□□□ -0.9
R3HDM1-207ENST00000436436 ASTLQ6HA08 431 aaPredicted RBP9.43□□□□□ -0.9
R3HDM1-207ENST00000436436 NUBP1P53384 320 aa9.4□□□□□ -0.9
R3HDM1-207ENST00000436436 ATMINO43313 823 aaPredicted RBP9.39□□□□□ -0.91
R3HDM1-207ENST00000436436 SGIP1Q9BQI5 828 aa9.39□□□□□ -0.91
R3HDM1-207ENST00000436436 C7P10643 843 aa9.38□□□□□ -0.91
R3HDM1-207ENST00000436436 SLC39A7Q92504 469 aa9.38□□□□□ -0.91
R3HDM1-207ENST00000436436 MAP3K13O43283 966 aa9.37□□□□□ -0.91
R3HDM1-207ENST00000436436 FAM212AQ96EL1 285 aa9.37□□□□□ -0.91
R3HDM1-207ENST00000436436 PELP1Q8IZL8 1130 aaKnown RBP9.36□□□□□ -0.91
R3HDM1-207ENST00000436436 TIE1P35590 1138 aa9.35□□□□□ -0.91
R3HDM1-207ENST00000436436 METRNQ9UJH8 293 aa9.34□□□□□ -0.91
R3HDM1-207ENST00000436436 BMP2KQ9NSY1 1161 aaPredicted RBP9.32□□□□□ -0.92
R3HDM1-207ENST00000436436 VASPP50552 380 aaPredicted RBP9.31□□□□□ -0.92
R3HDM1-207ENST00000436436 ATN1P54259 1190 aaPredicted RBP9.3□□□□□ -0.92
R3HDM1-207ENST00000436436 PCDHB13Q9Y5F0 798 aa9.3□□□□□ -0.92
R3HDM1-207ENST00000436436 POTEB2H3BUK9 544 aa9.29□□□□□ -0.92
R3HDM1-207ENST00000436436 OTUD5Q96G74 571 aa9.28□□□□□ -0.92
R3HDM1-207ENST00000436436 TRPC6Q9Y210 931 aa9.27□□□□□ -0.93
R3HDM1-207ENST00000436436 DCAF8Q5TAQ9 597 aa9.26□□□□□ -0.93
R3HDM1-207ENST00000436436 MAMSTRQ6ZN01 415 aa9.26□□□□□ -0.93
R3HDM1-207ENST00000436436 TTLL13PA6NNM8 815 aa9.25□□□□□ -0.93
R3HDM1-207ENST00000436436 KLHL34Q8N239 644 aa9.25□□□□□ -0.93
R3HDM1-207ENST00000436436 IFNL1Q8IU54 200 aa9.23□□□□□ -0.93
R3HDM1-207ENST00000436436 GSE1Q14687 1217 aa9.22□□□□□ -0.93
R3HDM1-207ENST00000436436 IER5LQ5T953 404 aa9.22□□□□□ -0.93
R3HDM1-207ENST00000436436 TRIM35Q9UPQ4 493 aa9.19□□□□□ -0.94
R3HDM1-207ENST00000436436 SEC24BO95487 1268 aa9.18□□□□□ -0.94
R3HDM1-207ENST00000436436 TMEM106CQ9BVX2 250 aa9.18□□□□□ -0.94
R3HDM1-207ENST00000436436 SCUBE2Q9NQ36 999 aa9.18□□□□□ -0.94
R3HDM1-207ENST00000436436 POTEJP0CG39 1038 aa9.17□□□□□ -0.94
R3HDM1-207ENST00000436436 PYGBP11216 843 aa9.17□□□□□ -0.94
R3HDM1-207ENST00000436436 POTEFA5A3E0 1075 aa9.16□□□□□ -0.94
R3HDM1-207ENST00000436436 CHRM1P11229 460 aaPredicted RBP9.15□□□□□ -0.94
R3HDM1-207ENST00000436436 ZNF467Q7Z7K2 595 aaPredicted RBP9.13□□□□□ -0.95
R3HDM1-207ENST00000436436 SPOCK2Q92563 424 aa9.13□□□□□ -0.95
R3HDM1-207ENST00000436436 COLQQ9Y215 455 aaPredicted RBP9.12□□□□□ -0.95
R3HDM1-207ENST00000436436 IFNLR1Q8IU57 520 aaPredicted RBP9.1□□□□□ -0.95
R3HDM1-207ENST00000436436 PCDHB8Q9UN66 801 aa9.1□□□□□ -0.95
R3HDM1-207ENST00000436436 PLCG2P16885 1265 aa9.09□□□□□ -0.95
R3HDM1-207ENST00000436436 IRX5P78411 483 aaPredicted RBP9.06□□□□□ -0.96
R3HDM1-207ENST00000436436 PLSCR2Q9NRY7 297 aa9.06□□□□□ -0.96
R3HDM1-207ENST00000436436 OCEL1Q9H607 264 aa9.05□□□□□ -0.96
R3HDM1-207ENST00000436436 CIZ1Q9ULV3 898 aaPredicted RBP9.03□□□□□ -0.96
R3HDM1-207ENST00000436436 TRIM41Q8WV44 630 aa9.02□□□□□ -0.97
R3HDM1-207ENST00000436436 PSEN1P49768 467 aa9.01□□□□□ -0.97
R3HDM1-207ENST00000436436 GOLGA2Q08379 1002 aa9.01□□□□□ -0.97
R3HDM1-207ENST00000436436 POTEMA6NI47 508 aa9□□□□□ -0.97
R3HDM1-207ENST00000436436 PDAP1Q13442 181 aaKnown RBP9□□□□□ -0.97
R3HDM1-207ENST00000436436 MKRN3Q13064 507 aaKnown RBP8.99□□□□□ -0.97
R3HDM1-207ENST00000436436 POTEGQ6S5H5 508 aa8.99□□□□□ -0.97
R3HDM1-207ENST00000436436 FAM163AQ96GL9 167 aaPredicted RBP8.97□□□□□ -0.97
R3HDM1-207ENST00000436436 PCDH10Q9P2E7 1040 aa8.97□□□□□ -0.97
R3HDM1-207ENST00000436436 SLAIN1Q8ND83 568 aa8.96□□□□□ -0.98
R3HDM1-207ENST00000436436 LCE2DQ5TA82 110 aaPredicted RBP8.93□□□□□ -0.98
R3HDM1-207ENST00000436436 PDCD7Q8N8D1 485 aaKnown RBP8.93□□□□□ -0.98
R3HDM1-207ENST00000436436 L3MBTL3Q96JM7 780 aaPredicted RBP8.93□□□□□ -0.98
R3HDM1-207ENST00000436436 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.92□□□□□ -0.982e-6■■□□□ 14.5
R3HDM1-207ENST00000436436 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.92□□□□□ -0.98
R3HDM1-207ENST00000436436 ILDR1Q86SU0 546 aaPredicted RBP8.91□□□□□ -0.98
R3HDM1-207ENST00000436436 SNPHO15079 494 aa8.88□□□□□ -0.99
R3HDM1-207ENST00000436436 C3orf67Q6ZVT6 689 aa8.87□□□□□ -0.99
R3HDM1-207ENST00000436436 CABP2Q9NPB3 220 aa8.87□□□□□ -0.99
R3HDM1-207ENST00000436436 RIOK3O14730 519 aaKnown RBP8.83□□□□□ -1
R3HDM1-207ENST00000436436 TMEM121BQ9BXQ6 578 aaPredicted RBP8.83□□□□□ -1
R3HDM1-207ENST00000436436 ST18O60284 1047 aa8.82□□□□□ -1
R3HDM1-207ENST00000436436 G3V3G9 751 aa8.81□□□□□ -1
R3HDM1-207ENST00000436436 VGFO15240 615 aaPredicted RBP8.81□□□□□ -1
R3HDM1-207ENST00000436436 TAOK2Q9UL54 1235 aa8.79□□□□□ -1
R3HDM1-207ENST00000436436 BOLA1Q9Y3E2 137 aa8.79□□□□□ -1
R3HDM1-207ENST00000436436 DPY19L2Q6NUT2 758 aa8.77□□□□□ -1.01
R3HDM1-207ENST00000436436 EFCAB3Q8N7B9 438 aa8.77□□□□□ -1.01
R3HDM1-207ENST00000436436 RNF25Q96BH1 459 aaPredicted RBP8.77□□□□□ -1.01
R3HDM1-207ENST00000436436 SOX12O15370 315 aa8.76□□□□□ -1.01
R3HDM1-207ENST00000436436 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.75□□□□□ -1.01
R3HDM1-207ENST00000436436 ZFP91Q96JP5 570 aaPredicted RBP8.75□□□□□ -1.01
R3HDM1-207ENST00000436436 CDAN1Q8IWY9 1227 aa8.73□□□□□ -1.01
R3HDM1-207ENST00000436436 ECM2O94769 699 aaPredicted RBP8.67□□□□□ -1.02
R3HDM1-207ENST00000436436 MICALL2Q8IY33 904 aa8.66□□□□□ -1.02
R3HDM1-207ENST00000436436 EMP3P54852 163 aa8.65□□□□□ -1.02
R3HDM1-207ENST00000436436 NLRP6P59044 892 aa8.65□□□□□ -1.02
R3HDM1-207ENST00000436436 MARVELD3Q96A59 401 aa8.65□□□□□ -1.02
R3HDM1-207ENST00000436436 BCL11BQ9C0K0 894 aaPredicted RBP8.65□□□□□ -1.02
R3HDM1-207ENST00000436436 PHF8Q9UPP1 1060 aa8.65□□□□□ -1.02
R3HDM1-207ENST00000436436 DOK7Q18PE1 504 aa8.64□□□□□ -1.03
R3HDM1-207ENST00000436436 MS4A4AQ96JQ5 239 aa8.64□□□□□ -1.03
R3HDM1-207ENST00000436436 STK24Q9Y6E0 443 aa8.63□□□□□ -1.03
R3HDM1-207ENST00000436436 HOXB3P14651 431 aaPredicted RBP8.62□□□□□ -1.03
R3HDM1-207ENST00000436436 PKD2Q13563 968 aa8.62□□□□□ -1.03
R3HDM1-207ENST00000436436 ZNF710Q8N1W2 664 aa8.62□□□□□ -1.03
R3HDM1-207ENST00000436436 STK25O00506 426 aa8.61□□□□□ -1.03
R3HDM1-207ENST00000436436 RIMBP2O15034 1052 aa8.61□□□□□ -1.03
R3HDM1-207ENST00000436436 HOXB1P14653 301 aaPredicted RBP8.6□□□□□ -1.03
R3HDM1-207ENST00000436436 FBXO22Q8NEZ5 403 aa8.6□□□□□ -1.03
R3HDM1-207ENST00000436436 ZSWIM6Q9HCJ5 1215 aa8.58□□□□□ -1.04
R3HDM1-207ENST00000436436 RGL2O15211 777 aa8.57□□□□□ -1.04
R3HDM1-207ENST00000436436 TMEM92Q6UXU6 159 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms