RNA–Protein interactions for RNA: ENST00000436172.1

CUL3-206, Transcript of cullin 3, humanhuman

TSL 4

Gene CUL3, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-206ENST00000436172 CCDC61Q9Y6R9 512 aa10.45□□□□□ -0.74
CUL3-206ENST00000436172 ATMINO43313 823 aaPredicted RBP10.44□□□□□ -0.74
CUL3-206ENST00000436172 PELP1Q8IZL8 1130 aaKnown RBP10.44□□□□□ -0.74
CUL3-206ENST00000436172 POTEB2H3BUK9 544 aa10.43□□□□□ -0.74
CUL3-206ENST00000436172 MIER1Q8N108 512 aa10.43□□□□□ -0.74
CUL3-206ENST00000436172 METRNQ9UJH8 293 aa10.42□□□□□ -0.74
CUL3-206ENST00000436172 KIF12Q96FN5 646 aa10.39□□□□□ -0.75
CUL3-206ENST00000436172 MAMSTRQ6ZN01 415 aa10.38□□□□□ -0.75
CUL3-206ENST00000436172 ZBTB47Q9UFB7 747 aaPredicted RBP10.37□□□□□ -0.75
CUL3-206ENST00000436172 TIE1P35590 1138 aa10.33□□□□□ -0.76
CUL3-206ENST00000436172 RASEFQ8IZ41 740 aa10.33□□□□□ -0.76
CUL3-206ENST00000436172 PLCD3Q8N3E9 789 aa10.33□□□□□ -0.76
CUL3-206ENST00000436172 ATN1P54259 1190 aaPredicted RBP10.32□□□□□ -0.76
CUL3-206ENST00000436172 MAP3K13O43283 966 aa10.3□□□□□ -0.76
CUL3-206ENST00000436172 SGIP1Q9BQI5 828 aa10.3□□□□□ -0.76
CUL3-206ENST00000436172 BMP2KQ9NSY1 1161 aaPredicted RBP10.3□□□□□ -0.76
CUL3-206ENST00000436172 SCUBE2Q9NQ36 999 aa10.29□□□□□ -0.76
CUL3-206ENST00000436172 PLSCR2Q9NRY7 297 aa10.27□□□□□ -0.77
CUL3-206ENST00000436172 POTEMA6NI47 508 aa10.26□□□□□ -0.77
CUL3-206ENST00000436172 POTEJP0CG39 1038 aa10.26□□□□□ -0.77
CUL3-206ENST00000436172 TRPC6Q9Y210 931 aa10.23□□□□□ -0.77
CUL3-206ENST00000436172 TTLL13PA6NNM8 815 aa10.22□□□□□ -0.77
CUL3-206ENST00000436172 NUBP1P53384 320 aa10.22□□□□□ -0.77
CUL3-206ENST00000436172 POTEGQ6S5H5 508 aa10.22□□□□□ -0.77
CUL3-206ENST00000436172 PCDH10Q9P2E7 1040 aa10.22□□□□□ -0.77
CUL3-206ENST00000436172 IER5LQ5T953 404 aa10.21□□□□□ -0.77
CUL3-206ENST00000436172 FAM212AQ96EL1 285 aa10.21□□□□□ -0.77
CUL3-206ENST00000436172 PCDHB13Q9Y5F0 798 aa10.21□□□□□ -0.77
CUL3-206ENST00000436172 SEC24BO95487 1268 aa10.19□□□□□ -0.78
CUL3-206ENST00000436172 POTEFA5A3E0 1075 aa10.18□□□□□ -0.78
CUL3-206ENST00000436172 FKBP8Q14318 412 aa10.18□□□□□ -0.78
CUL3-206ENST00000436172 TRIM35Q9UPQ4 493 aa10.15□□□□□ -0.78
CUL3-206ENST00000436172 FBXO3Q9UK99 471 aa10.14□□□□□ -0.79
CUL3-206ENST00000436172 IFNL1Q8IU54 200 aa10.12□□□□□ -0.79
CUL3-206ENST00000436172 COLQQ9Y215 455 aaPredicted RBP10.12□□□□□ -0.79
CUL3-206ENST00000436172 FAM163AQ96GL9 167 aaPredicted RBP10.1□□□□□ -0.79
CUL3-206ENST00000436172 TMEM106CQ9BVX2 250 aa10.09□□□□□ -0.79
CUL3-206ENST00000436172 LCE2DQ5TA82 110 aaPredicted RBP10.08□□□□□ -0.8
CUL3-206ENST00000436172 PLCG2P16885 1265 aa10.05□□□□□ -0.8
CUL3-206ENST00000436172 DCAF8Q5TAQ9 597 aa10.05□□□□□ -0.8
CUL3-206ENST00000436172 IRX5P78411 483 aaPredicted RBP10□□□□□ -0.81
CUL3-206ENST00000436172 PYGBP11216 843 aa9.99□□□□□ -0.81
CUL3-206ENST00000436172 SLAIN1Q8ND83 568 aa9.99□□□□□ -0.81
CUL3-206ENST00000436172 GSE1Q14687 1217 aa9.98□□□□□ -0.81
CUL3-206ENST00000436172 OCEL1Q9H607 264 aa9.98□□□□□ -0.81
CUL3-206ENST00000436172 VASPP50552 380 aaPredicted RBP9.95□□□□□ -0.82
CUL3-206ENST00000436172 ZNF467Q7Z7K2 595 aaPredicted RBP9.95□□□□□ -0.82
CUL3-206ENST00000436172 KLHL34Q8N239 644 aa9.94□□□□□ -0.82
CUL3-206ENST00000436172 PCDHB8Q9UN66 801 aa9.92□□□□□ -0.82
CUL3-206ENST00000436172 CHRM1P11229 460 aaPredicted RBP9.91□□□□□ -0.82
CUL3-206ENST00000436172 SNPHO15079 494 aa9.9□□□□□ -0.82
CUL3-206ENST00000436172 ST18O60284 1047 aa9.89□□□□□ -0.83
CUL3-206ENST00000436172 CDAN1Q8IWY9 1227 aa9.89□□□□□ -0.83
CUL3-206ENST00000436172 TMEM121BQ9BXQ6 578 aaPredicted RBP9.89□□□□□ -0.83
CUL3-206ENST00000436172 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.89□□□□□ -0.83
CUL3-206ENST00000436172 GOLGA2Q08379 1002 aa9.87□□□□□ -0.83
CUL3-206ENST00000436172 MKRN3Q13064 507 aaKnown RBP9.86□□□□□ -0.83
CUL3-206ENST00000436172 L3MBTL3Q96JM7 780 aaPredicted RBP9.84□□□□□ -0.83
CUL3-206ENST00000436172 PDCD7Q8N8D1 485 aaKnown RBP9.82□□□□□ -0.84
CUL3-206ENST00000436172 PSEN1P49768 467 aa9.81□□□□□ -0.84
CUL3-206ENST00000436172 C3orf67Q6ZVT6 689 aa9.81□□□□□ -0.84
CUL3-206ENST00000436172 PDAP1Q13442 181 aaKnown RBP9.79□□□□□ -0.84
CUL3-206ENST00000436172 SPOCK2Q92563 424 aa9.78□□□□□ -0.84
CUL3-206ENST00000436172 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.78□□□□□ -0.845e-10■□□□□ 10.5
CUL3-206ENST00000436172 ILDR1Q86SU0 546 aaPredicted RBP9.75□□□□□ -0.85
CUL3-206ENST00000436172 IFNLR1Q8IU57 520 aaPredicted RBP9.71□□□□□ -0.86
CUL3-206ENST00000436172 CIZ1Q9ULV3 898 aaPredicted RBP9.71□□□□□ -0.86
CUL3-206ENST00000436172 TRIM41Q8WV44 630 aa9.7□□□□□ -0.86
CUL3-206ENST00000436172 G3V3G9 751 aa9.68□□□□□ -0.86
CUL3-206ENST00000436172 MARVELD3Q96A59 401 aa9.68□□□□□ -0.86
CUL3-206ENST00000436172 CABP2Q9NPB3 220 aa9.67□□□□□ -0.86
CUL3-206ENST00000436172 EMP3P54852 163 aa9.66□□□□□ -0.86
CUL3-206ENST00000436172 BOLA1Q9Y3E2 137 aa9.65□□□□□ -0.86
CUL3-206ENST00000436172 SPNS2Q8IVW8 549 aa9.64□□□□□ -0.87
CUL3-206ENST00000436172 MMRN1Q13201 1228 aa9.63□□□□□ -0.87
CUL3-206ENST00000436172 DPY19L2Q6NUT2 758 aa9.6□□□□□ -0.87
CUL3-206ENST00000436172 HS3ST6Q96QI5 342 aa9.58□□□□□ -0.88
CUL3-206ENST00000436172 FAM205CA6NFA0 338 aa9.56□□□□□ -0.88
CUL3-206ENST00000436172 DOK7Q18PE1 504 aa9.55□□□□□ -0.88
CUL3-206ENST00000436172 HOXB3P14651 431 aaPredicted RBP9.54□□□□□ -0.88
CUL3-206ENST00000436172 ZNF710Q8N1W2 664 aa9.54□□□□□ -0.88
CUL3-206ENST00000436172 EFCAB3Q8N7B9 438 aa9.53□□□□□ -0.88
CUL3-206ENST00000436172 RIMBP2O15034 1052 aa9.52□□□□□ -0.89
CUL3-206ENST00000436172 HOXB1P14653 301 aaPredicted RBP9.52□□□□□ -0.89
CUL3-206ENST00000436172 POTEB3A0JP26 581 aa9.51□□□□□ -0.89
CUL3-206ENST00000436172 SOX12O15370 315 aa9.51□□□□□ -0.89
CUL3-206ENST00000436172 POTEBQ6S5H4 581 aa9.51□□□□□ -0.89
CUL3-206ENST00000436172 KRTAP3-3Q9BYR6 98 aa9.51□□□□□ -0.89
CUL3-206ENST00000436172 KRTAP3-2Q9BYR7 98 aa9.51□□□□□ -0.89
CUL3-206ENST00000436172 RIOK3O14730 519 aaKnown RBP9.5□□□□□ -0.89
CUL3-206ENST00000436172 ZSWIM6Q9HCJ5 1215 aa9.48□□□□□ -0.89
CUL3-206ENST00000436172 VGFO15240 615 aaPredicted RBP9.47□□□□□ -0.89
CUL3-206ENST00000436172 MICALL2Q8IY33 904 aa9.46□□□□□ -0.9
CUL3-206ENST00000436172 ERBB3P21860 1342 aa9.45□□□□□ -0.9
CUL3-206ENST00000436172 TAOK2Q9UL54 1235 aa9.44□□□□□ -0.9
CUL3-206ENST00000436172 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.42□□□□□ -0.9
CUL3-206ENST00000436172 ZFP91Q96JP5 570 aaPredicted RBP9.42□□□□□ -0.9
CUL3-206ENST00000436172 RNF25Q96BH1 459 aaPredicted RBP9.41□□□□□ -0.9
CUL3-206ENST00000436172 MS4A4AQ96JQ5 239 aa9.39□□□□□ -0.91
CUL3-206ENST00000436172 TMEM92Q6UXU6 159 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms