RNA–Protein interactions for RNA: ENST00000433383.1

NEK4P1-201, Transcript of NIMA-related kinase 4 pseudogene 1, humanhuman

BASIC

Gene NEK4P1, Length 879 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4P1-201ENST00000433383 POTEMA6NI47 508 aa14.35□□□□□ -0.11
NEK4P1-201ENST00000433383 ATMINO43313 823 aaPredicted RBP14.35□□□□□ -0.11
NEK4P1-201ENST00000433383 METRNQ9UJH8 293 aa14.35□□□□□ -0.11
NEK4P1-201ENST00000433383 CCDC61Q9Y6R9 512 aa14.33□□□□□ -0.12
NEK4P1-201ENST00000433383 SLC39A7Q92504 469 aa14.3□□□□□ -0.12
NEK4P1-201ENST00000433383 C7P10643 843 aa14.28□□□□□ -0.12
NEK4P1-201ENST00000433383 PCDH10Q9P2E7 1040 aa14.28□□□□□ -0.12
NEK4P1-201ENST00000433383 POTEGQ6S5H5 508 aa14.25□□□□□ -0.13
NEK4P1-201ENST00000433383 KIF12Q96FN5 646 aa14.25□□□□□ -0.13
NEK4P1-201ENST00000433383 POTEJP0CG39 1038 aa14.23□□□□□ -0.13
NEK4P1-201ENST00000433383 ATN1P54259 1190 aaPredicted RBP14.22□□□□□ -0.13
NEK4P1-201ENST00000433383 PLEKHG5O94827 1062 aa14.21□□□□□ -0.13
NEK4P1-201ENST00000433383 MIER1Q8N108 512 aa14.21□□□□□ -0.13
NEK4P1-201ENST00000433383 RASEFQ8IZ41 740 aa14.19□□□□□ -0.14
NEK4P1-201ENST00000433383 TRPC6Q9Y210 931 aa14.18□□□□□ -0.14
NEK4P1-201ENST00000433383 BMP2KQ9NSY1 1161 aaPredicted RBP14.17□□□□□ -0.14
NEK4P1-201ENST00000433383 MAP3K13O43283 966 aa14.16□□□□□ -0.14
NEK4P1-201ENST00000433383 MAMSTRQ6ZN01 415 aa14.14□□□□□ -0.15
NEK4P1-201ENST00000433383 POTEFA5A3E0 1075 aa14.09□□□□□ -0.15
NEK4P1-201ENST00000433383 TIE1P35590 1138 aa14.09□□□□□ -0.15
NEK4P1-201ENST00000433383 PLCD3Q8N3E9 789 aa14.08□□□□□ -0.16
NEK4P1-201ENST00000433383 SCUBE2Q9NQ36 999 aa14.07□□□□□ -0.16
NEK4P1-201ENST00000433383 TTLL13PA6NNM8 815 aa14.03□□□□□ -0.16
NEK4P1-201ENST00000433383 LCE2DQ5TA82 110 aaPredicted RBP14□□□□□ -0.17
NEK4P1-201ENST00000433383 NUBP1P53384 320 aa13.99□□□□□ -0.17
NEK4P1-201ENST00000433383 COLQQ9Y215 455 aaPredicted RBP13.98□□□□□ -0.17
NEK4P1-201ENST00000433383 PCDHB13Q9Y5F0 798 aa13.98□□□□□ -0.17
NEK4P1-201ENST00000433383 ZBTB47Q9UFB7 747 aaPredicted RBP13.97□□□□□ -0.17
NEK4P1-201ENST00000433383 FAM163AQ96GL9 167 aaPredicted RBP13.96□□□□□ -0.17
NEK4P1-201ENST00000433383 SGIP1Q9BQI5 828 aa13.96□□□□□ -0.17
NEK4P1-201ENST00000433383 SEC24BO95487 1268 aa13.95□□□□□ -0.18
NEK4P1-201ENST00000433383 TRIM35Q9UPQ4 493 aa13.94□□□□□ -0.18
NEK4P1-201ENST00000433383 IER5LQ5T953 404 aa13.9□□□□□ -0.18
NEK4P1-201ENST00000433383 IFNL1Q8IU54 200 aa13.9□□□□□ -0.18
NEK4P1-201ENST00000433383 FAM212AQ96EL1 285 aa13.89□□□□□ -0.19
NEK4P1-201ENST00000433383 FKBP8Q14318 412 aa13.88□□□□□ -0.19
NEK4P1-201ENST00000433383 TMEM106CQ9BVX2 250 aa13.83□□□□□ -0.2
NEK4P1-201ENST00000433383 PLCG2P16885 1265 aa13.75□□□□□ -0.21
NEK4P1-201ENST00000433383 SLAIN1Q8ND83 568 aa13.73□□□□□ -0.21
NEK4P1-201ENST00000433383 PYGBP11216 843 aa13.72□□□□□ -0.21
NEK4P1-201ENST00000433383 IRX5P78411 483 aaPredicted RBP13.72□□□□□ -0.21
NEK4P1-201ENST00000433383 DCAF8Q5TAQ9 597 aa13.72□□□□□ -0.21
NEK4P1-201ENST00000433383 FBXO3Q9UK99 471 aa13.65□□□□□ -0.22
NEK4P1-201ENST00000433383 PCDHB8Q9UN66 801 aa13.65□□□□□ -0.22
NEK4P1-201ENST00000433383 ST18O60284 1047 aa13.64□□□□□ -0.23
NEK4P1-201ENST00000433383 CDAN1Q8IWY9 1227 aa13.64□□□□□ -0.23
NEK4P1-201ENST00000433383 OCEL1Q9H607 264 aa13.63□□□□□ -0.23
NEK4P1-201ENST00000433383 VASPP50552 380 aaPredicted RBP13.53□□□□□ -0.24
NEK4P1-201ENST00000433383 KLHL34Q8N239 644 aa13.53□□□□□ -0.24
NEK4P1-201ENST00000433383 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.52□□□□□ -0.25
NEK4P1-201ENST00000433383 GSE1Q14687 1217 aa13.51□□□□□ -0.25
NEK4P1-201ENST00000433383 ZNF467Q7Z7K2 595 aaPredicted RBP13.5□□□□□ -0.25
NEK4P1-201ENST00000433383 PDCD7Q8N8D1 485 aaKnown RBP13.49□□□□□ -0.25
NEK4P1-201ENST00000433383 SNPHO15079 494 aa13.46□□□□□ -0.25
NEK4P1-201ENST00000433383 TMEM121BQ9BXQ6 578 aaPredicted RBP13.46□□□□□ -0.25
NEK4P1-201ENST00000433383 CHRM1P11229 460 aaPredicted RBP13.43□□□□□ -0.26
NEK4P1-201ENST00000433383 GOLGA2Q08379 1002 aa13.43□□□□□ -0.26
NEK4P1-201ENST00000433383 MKRN3Q13064 507 aaKnown RBP13.43□□□□□ -0.26
NEK4P1-201ENST00000433383 C3orf67Q6ZVT6 689 aa13.41□□□□□ -0.26
NEK4P1-201ENST00000433383 PSEN1P49768 467 aa13.4□□□□□ -0.26
NEK4P1-201ENST00000433383 MARVELD3Q96A59 401 aa13.4□□□□□ -0.26
NEK4P1-201ENST00000433383 L3MBTL3Q96JM7 780 aaPredicted RBP13.38□□□□□ -0.27
NEK4P1-201ENST00000433383 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.38□□□□□ -0.27
NEK4P1-201ENST00000433383 MMRN1Q13201 1228 aa13.31□□□□□ -0.28
NEK4P1-201ENST00000433383 PDAP1Q13442 181 aaKnown RBP13.31□□□□□ -0.28
NEK4P1-201ENST00000433383 SPNS2Q8IVW8 549 aa13.31□□□□□ -0.28
NEK4P1-201ENST00000433383 ILDR1Q86SU0 546 aaPredicted RBP13.29□□□□□ -0.28
NEK4P1-201ENST00000433383 EMP3P54852 163 aa13.28□□□□□ -0.28
NEK4P1-201ENST00000433383 SPOCK2Q92563 424 aa13.27□□□□□ -0.29
NEK4P1-201ENST00000433383 DPY19L2Q6NUT2 758 aa13.26□□□□□ -0.29
NEK4P1-201ENST00000433383 IFNLR1Q8IU57 520 aaPredicted RBP13.26□□□□□ -0.29
NEK4P1-201ENST00000433383 CABP2Q9NPB3 220 aa13.25□□□□□ -0.29
NEK4P1-201ENST00000433383 CIZ1Q9ULV3 898 aaPredicted RBP13.25□□□□□ -0.29
NEK4P1-201ENST00000433383 POTEB3A0JP26 581 aa13.19□□□□□ -0.3
NEK4P1-201ENST00000433383 POTEBQ6S5H4 581 aa13.19□□□□□ -0.3
NEK4P1-201ENST00000433383 HS3ST6Q96QI5 342 aa13.19□□□□□ -0.3
NEK4P1-201ENST00000433383 BOLA1Q9Y3E2 137 aa13.18□□□□□ -0.3
NEK4P1-201ENST00000433383 FAM205CA6NFA0 338 aa13.17□□□□□ -0.3
NEK4P1-201ENST00000433383 G3V3G9 751 aa13.16□□□□□ -0.3
NEK4P1-201ENST00000433383 KRTAP3-3Q9BYR6 98 aa13.16□□□□□ -0.3
NEK4P1-201ENST00000433383 KRTAP3-2Q9BYR7 98 aa13.16□□□□□ -0.3
NEK4P1-201ENST00000433383 HOXB3P14651 431 aaPredicted RBP13.12□□□□□ -0.31
NEK4P1-201ENST00000433383 EFCAB3Q8N7B9 438 aa13.05□□□□□ -0.32
NEK4P1-201ENST00000433383 ZNF710Q8N1W2 664 aa13.04□□□□□ -0.32
NEK4P1-201ENST00000433383 HOXB1P14653 301 aaPredicted RBP13.03□□□□□ -0.32
NEK4P1-201ENST00000433383 TRIM41Q8WV44 630 aa13.03□□□□□ -0.32
NEK4P1-201ENST00000433383 DOK7Q18PE1 504 aa13.01□□□□□ -0.33
NEK4P1-201ENST00000433383 ERBB3P21860 1342 aa12.96□□□□□ -0.33
NEK4P1-201ENST00000433383 MICALL2Q8IY33 904 aa12.95□□□□□ -0.34
NEK4P1-201ENST00000433383 RIMBP2O15034 1052 aa12.94□□□□□ -0.34
NEK4P1-201ENST00000433383 TMEM92Q6UXU6 159 aa12.94□□□□□ -0.34
NEK4P1-201ENST00000433383 RNF25Q96BH1 459 aaPredicted RBP12.91□□□□□ -0.34
NEK4P1-201ENST00000433383 RIOK3O14730 519 aaKnown RBP12.9□□□□□ -0.34
NEK4P1-201ENST00000433383 VARS2Q5ST30 1063 aaKnown RBP12.89□□□□□ -0.35
NEK4P1-201ENST00000433383 MS4A4AQ96JQ5 239 aa12.89□□□□□ -0.35
NEK4P1-201ENST00000433383 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.88□□□□□ -0.35
NEK4P1-201ENST00000433383 SOX12O15370 315 aa12.88□□□□□ -0.35
NEK4P1-201ENST00000433383 ZFP91Q96JP5 570 aaPredicted RBP12.88□□□□□ -0.35
NEK4P1-201ENST00000433383 PHF8Q9UPP1 1060 aa12.86□□□□□ -0.35
NEK4P1-201ENST00000433383 ZSWIM6Q9HCJ5 1215 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms