RNA–Protein interactions for RNA: ENST00000430593.3

CSNK1A1P1-201, Transcript of casein kinase 1 alpha 1 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK1A1P1, Length 2,147 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P1-201ENST00000430593 NOP58Q9Y2X3 529 aaKnown RBP19.44■□□□□ 0.7
CSNK1A1P1-201ENST00000430593 TRIM52Q96A61 297 aa19.39■□□□□ 0.69
CSNK1A1P1-201ENST00000430593 WDR97A6NE52 1622 aa19.38■□□□□ 0.69
CSNK1A1P1-201ENST00000430593 DDX10Q13206 875 aaKnown RBP19.37■□□□□ 0.69
CSNK1A1P1-201ENST00000430593 PPP4R2Q9NY27 417 aa19.36■□□□□ 0.69
CSNK1A1P1-201ENST00000430593 ANP32CO43423 234 aa19.36■□□□□ 0.69
CSNK1A1P1-201ENST00000430593 NESP48681 1621 aa19.35■□□□□ 0.69
CSNK1A1P1-201ENST00000430593 TIMELESSQ9UNS1 1208 aa19.34■□□□□ 0.69
CSNK1A1P1-201ENST00000430593 SYNJ1O43426 1573 aa19.33■□□□□ 0.69
CSNK1A1P1-201ENST00000430593 RAPGEF2Q9Y4G8 1499 aa19.29■□□□□ 0.68
CSNK1A1P1-201ENST00000430593 CCNB3Q8WWL7 1395 aa19.29■□□□□ 0.68
CSNK1A1P1-201ENST00000430593 LAMC3Q9Y6N6 1575 aa19.27■□□□□ 0.68
CSNK1A1P1-201ENST00000430593 ARAP1Q96P48 1450 aa19.27■□□□□ 0.67
CSNK1A1P1-201ENST00000430593 RTL5Q5HYW3 569 aaPredicted RBP19.26■□□□□ 0.67
CSNK1A1P1-201ENST00000430593 NBR1Q14596 966 aa19.25■□□□□ 0.67
CSNK1A1P1-201ENST00000430593 ERICH3Q5RHP9 1530 aa19.25■□□□□ 0.67
CSNK1A1P1-201ENST00000430593 RAB3GAP2Q9H2M9 1393 aa19.24■□□□□ 0.67
CSNK1A1P1-201ENST00000430593 CADPSQ9ULU8 1353 aa19.24■□□□□ 0.67
CSNK1A1P1-201ENST00000430593 C11orf95C9JLR9 678 aaPredicted RBP19.24■□□□□ 0.67
CSNK1A1P1-201ENST00000430593 PAK3O75914 559 aaPredicted RBP19.24■□□□□ 0.67
CSNK1A1P1-201ENST00000430593 WASHC2AQ641Q2 1341 aa19.23■□□□□ 0.67
CSNK1A1P1-201ENST00000430593 IL27Q8NEV9 243 aa19.22■□□□□ 0.67
CSNK1A1P1-201ENST00000430593 ERCC6Q03468 1493 aa19.22■□□□□ 0.67
CSNK1A1P1-201ENST00000430593 CCDC136Q96JN2 1154 aa19.21■□□□□ 0.67
CSNK1A1P1-201ENST00000430593 IPO9Q96P70 1041 aaKnown RBP19.19■□□□□ 0.66
CSNK1A1P1-201ENST00000430593 AEBP2Q6ZN18 517 aaPredicted RBP19.16■□□□□ 0.66
CSNK1A1P1-201ENST00000430593 CFTRP13569 1480 aa19.15■□□□□ 0.66
CSNK1A1P1-201ENST00000430593 SETD5Q9C0A6 1442 aa19.15■□□□□ 0.66
CSNK1A1P1-201ENST00000430593 KANK4Q5T7N3 995 aaPredicted RBP19.15■□□□□ 0.66
CSNK1A1P1-201ENST00000430593 USP35Q9P2H5 1018 aa19.15■□□□□ 0.66
CSNK1A1P1-201ENST00000430593 ANP32AP39687 249 aaKnown RBP19.14■□□□□ 0.65
CSNK1A1P1-201ENST00000430593 IRX6P78412 446 aaPredicted RBP19.13■□□□□ 0.65
CSNK1A1P1-201ENST00000430593 HNRNPUQ00839 825 aaKnown RBP eCLIP19.13■□□□□ 0.65
CSNK1A1P1-201ENST00000430593 WASHC2CQ9Y4E1 1318 aa19.13■□□□□ 0.65
CSNK1A1P1-201ENST00000430593 PDS5BQ9NTI5 1447 aa19.13■□□□□ 0.65
CSNK1A1P1-201ENST00000430593 KIF21AQ7Z4S6 1674 aa19.11■□□□□ 0.65
CSNK1A1P1-201ENST00000430593 MAP3K1Q13233 1512 aa19.1■□□□□ 0.65
CSNK1A1P1-201ENST00000430593 ZBTB47Q9UFB7 747 aaPredicted RBP19.07■□□□□ 0.64
CSNK1A1P1-201ENST00000430593 PRXQ9BXM0 1461 aa19.07■□□□□ 0.64
CSNK1A1P1-201ENST00000430593 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.06■□□□□ 0.64
CSNK1A1P1-201ENST00000430593 FANCD2Q9BXW9 1451 aa19.03■□□□□ 0.64
CSNK1A1P1-201ENST00000430593 B4GALNT3Q6L9W6 998 aa19.03■□□□□ 0.64
CSNK1A1P1-201ENST00000430593 THOC2Q8NI27 1593 aaKnown RBP19.02■□□□□ 0.64
CSNK1A1P1-201ENST00000430593 RTN4Q9NQC3 1192 aaKnown RBP19.01■□□□□ 0.63
CSNK1A1P1-201ENST00000430593 ZBED9Q6R2W3 1325 aa19■□□□□ 0.63
CSNK1A1P1-201ENST00000430593 FHAD1B1AJZ9 1412 aa19■□□□□ 0.63
CSNK1A1P1-201ENST00000430593 PRDM2Q13029 1718 aa19■□□□□ 0.63
CSNK1A1P1-201ENST00000430593 TOP2BQ02880 1626 aa18.98■□□□□ 0.63
CSNK1A1P1-201ENST00000430593 SIN3AQ96ST3 1273 aa18.97■□□□□ 0.63
CSNK1A1P1-201ENST00000430593 NCOA2Q15596 1464 aa18.97■□□□□ 0.63
CSNK1A1P1-201ENST00000430593 TIAM1Q13009 1591 aa18.96■□□□□ 0.63
CSNK1A1P1-201ENST00000430593 MRC2Q9UBG0 1479 aa18.95■□□□□ 0.62
CSNK1A1P1-201ENST00000430593 BIVM-ERCC5R4GMW8 1640 aa18.93■□□□□ 0.62
CSNK1A1P1-201ENST00000430593 RNF123Q5XPI4 1314 aa18.92■□□□□ 0.62
CSNK1A1P1-201ENST00000430593 PPM1GO15355 546 aaPredicted RBP18.91■□□□□ 0.62
CSNK1A1P1-201ENST00000430593 PKNOX2Q96KN3 472 aa18.91■□□□□ 0.62
CSNK1A1P1-201ENST00000430593 RSPH6AQ9H0K4 717 aa18.9■□□□□ 0.62
CSNK1A1P1-201ENST00000430593 SMG6Q86US8 1419 aaKnown RBP18.89■□□□□ 0.61
CSNK1A1P1-201ENST00000430593 ARHGAP35Q9NRY4 1499 aa18.89■□□□□ 0.61
CSNK1A1P1-201ENST00000430593 WDR62O43379 1518 aa18.89■□□□□ 0.61
CSNK1A1P1-201ENST00000430593 HIRIP3Q9BW71 556 aaPredicted RBP18.88■□□□□ 0.61
CSNK1A1P1-201ENST00000430593 NEFMP07197 916 aa18.87■□□□□ 0.61
CSNK1A1P1-201ENST00000430593 KDM5BQ9UGL1 1544 aa18.87■□□□□ 0.61
CSNK1A1P1-201ENST00000430593 CNTLNQ9NXG0 1405 aa18.86■□□□□ 0.61
CSNK1A1P1-201ENST00000430593 TONSLQ96HA7 1378 aa18.86■□□□□ 0.61
CSNK1A1P1-201ENST00000430593 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.86■□□□□ 0.61
CSNK1A1P1-201ENST00000430593 URB2Q14146 1524 aaKnown RBP18.85■□□□□ 0.61
CSNK1A1P1-201ENST00000430593 CFAP43Q8NDM7 1665 aa18.84■□□□□ 0.61
CSNK1A1P1-201ENST00000430593 LRRC9Q6ZRR7 1453 aa18.83■□□□□ 0.61
CSNK1A1P1-201ENST00000430593 RANGAP1P46060 587 aaPredicted RBP18.8■□□□□ 0.6
CSNK1A1P1-201ENST00000430593 GSE1Q14687 1217 aa18.79■□□□□ 0.6
CSNK1A1P1-201ENST00000430593 BRPF3Q9ULD4 1205 aa18.79■□□□□ 0.6
CSNK1A1P1-201ENST00000430593 EIF5BO60841 1220 aaKnown RBP18.79■□□□□ 0.6
CSNK1A1P1-201ENST00000430593 ABCA5Q8WWZ7 1642 aa18.78■□□□□ 0.6
CSNK1A1P1-201ENST00000430593 PHLDB1Q86UU1 1377 aa18.77■□□□□ 0.6
CSNK1A1P1-201ENST00000430593 FAM43AQ8N2R8 423 aa18.76■□□□□ 0.59
CSNK1A1P1-201ENST00000430593 POLR1AO95602 1720 aaPredicted RBP18.75■□□□□ 0.59
CSNK1A1P1-201ENST00000430593 TOPBP1Q92547 1522 aa18.74■□□□□ 0.59
CSNK1A1P1-201ENST00000430593 TCERG1O14776 1098 aaKnown RBP18.74■□□□□ 0.59
CSNK1A1P1-201ENST00000430593 GLIPR1L2Q4G1C9 344 aa18.74■□□□□ 0.59
CSNK1A1P1-201ENST00000430593 UACAQ9BZF9 1416 aa18.74■□□□□ 0.59
CSNK1A1P1-201ENST00000430593 AKNAQ7Z591 1439 aa18.73■□□□□ 0.59
CSNK1A1P1-201ENST00000430593 PRKRIP1Q9H875 184 aaPredicted RBP18.73■□□□□ 0.59
CSNK1A1P1-201ENST00000430593 DNMBPQ6XZF7 1577 aa18.71■□□□□ 0.59
CSNK1A1P1-201ENST00000430593 MS4A1P11836 297 aa18.71■□□□□ 0.59
CSNK1A1P1-201ENST00000430593 NUDCQ9Y266 331 aa18.71■□□□□ 0.59
CSNK1A1P1-201ENST00000430593 LAS1LQ9Y4W2 734 aaKnown RBP18.71■□□□□ 0.59
CSNK1A1P1-201ENST00000430593 CCDC184Q52MB2 194 aa18.7■□□□□ 0.58
CSNK1A1P1-201ENST00000430593 NCOA1Q15788 1441 aa18.69■□□□□ 0.58
CSNK1A1P1-201ENST00000430593 CCDC18Q5T9S5 1454 aa18.68■□□□□ 0.58
CSNK1A1P1-201ENST00000430593 DDRGK1Q96HY6 314 aa18.67■□□□□ 0.58
CSNK1A1P1-201ENST00000430593 MRS2Q9HD23 443 aa18.67■□□□□ 0.58
CSNK1A1P1-201ENST00000430593 BACH2Q9BYV9 841 aa18.66■□□□□ 0.58
CSNK1A1P1-201ENST00000430593 HFM1A2PYH4 1435 aa18.66■□□□□ 0.58
CSNK1A1P1-201ENST00000430593 PTPN23Q9H3S7 1636 aa18.64■□□□□ 0.57
CSNK1A1P1-201ENST00000430593 CUX1P39880 1505 aa18.64■□□□□ 0.57
CSNK1A1P1-201ENST00000430593 KIF27Q86VH2 1401 aa18.64■□□□□ 0.57
CSNK1A1P1-201ENST00000430593 PDE4AP27815 886 aa18.63■□□□□ 0.57
CSNK1A1P1-201ENST00000430593 FAM9BQ8IZU0 186 aa18.63■□□□□ 0.57
CSNK1A1P1-201ENST00000430593 CCDC7Q96M83 1385 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms