RNA–Protein interactions for RNA: ENST00000428761.1

LINC00348-201, long intergenic non-protein coding RNA 348, humanhuman

TSL 3 BASIC

Gene LINC00348, Length 948 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00348-201ENST00000428761 VASPP50552 380 aaPredicted RBP13.59□□□□□ -0.23
LINC00348-201ENST00000428761 PLCD3Q8N3E9 789 aa13.58□□□□□ -0.24
LINC00348-201ENST00000428761 POTEB2H3BUK9 544 aa13.57□□□□□ -0.24
LINC00348-201ENST00000428761 CCDC61Q9Y6R9 512 aa13.57□□□□□ -0.24
LINC00348-201ENST00000428761 ASTLQ6HA08 431 aaPredicted RBP13.54□□□□□ -0.24
LINC00348-201ENST00000428761 ATMINO43313 823 aaPredicted RBP13.53□□□□□ -0.24
LINC00348-201ENST00000428761 OTUD5Q96G74 571 aa13.53□□□□□ -0.24
LINC00348-201ENST00000428761 RASEFQ8IZ41 740 aa13.51□□□□□ -0.25
LINC00348-201ENST00000428761 KIF12Q96FN5 646 aa13.51□□□□□ -0.25
LINC00348-201ENST00000428761 METRNQ9UJH8 293 aa13.51□□□□□ -0.25
LINC00348-201ENST00000428761 SLC39A7Q92504 469 aa13.48□□□□□ -0.25
LINC00348-201ENST00000428761 C7P10643 843 aa13.46□□□□□ -0.25
LINC00348-201ENST00000428761 MAP3K13O43283 966 aa13.45□□□□□ -0.26
LINC00348-201ENST00000428761 ATN1P54259 1190 aaPredicted RBP13.44□□□□□ -0.26
LINC00348-201ENST00000428761 IFNLR1Q8IU57 520 aaPredicted RBP13.43□□□□□ -0.26
LINC00348-201ENST00000428761 TRPC6Q9Y210 931 aa13.42□□□□□ -0.26
LINC00348-201ENST00000428761 ZBTB47Q9UFB7 747 aaPredicted RBP13.41□□□□□ -0.26
LINC00348-201ENST00000428761 BMP2KQ9NSY1 1161 aaPredicted RBP13.39□□□□□ -0.27
LINC00348-201ENST00000428761 KLHL34Q8N239 644 aa13.38□□□□□ -0.27
LINC00348-201ENST00000428761 POTEJP0CG39 1038 aa13.35□□□□□ -0.27
LINC00348-201ENST00000428761 NUBP1P53384 320 aa13.34□□□□□ -0.27
LINC00348-201ENST00000428761 TIE1P35590 1138 aa13.33□□□□□ -0.28
LINC00348-201ENST00000428761 PCDHB13Q9Y5F0 798 aa13.31□□□□□ -0.28
LINC00348-201ENST00000428761 SLC24A1O60721 1099 aa13.3□□□□□ -0.28
LINC00348-201ENST00000428761 AMER1Q5JTC6 1135 aaPredicted RBP13.3□□□□□ -0.28
LINC00348-201ENST00000428761 MAMSTRQ6ZN01 415 aa13.3□□□□□ -0.28
LINC00348-201ENST00000428761 RTN4Q9NQC3 1192 aaKnown RBP13.29□□□□□ -0.28
LINC00348-201ENST00000428761 TTLL13PA6NNM8 815 aa13.28□□□□□ -0.28
LINC00348-201ENST00000428761 FAM212AQ96EL1 285 aa13.27□□□□□ -0.29
LINC00348-201ENST00000428761 PLSCR2Q9NRY7 297 aa13.27□□□□□ -0.29
LINC00348-201ENST00000428761 POTEFA5A3E0 1075 aa13.26□□□□□ -0.29
LINC00348-201ENST00000428761 SPOCK2Q92563 424 aa13.26□□□□□ -0.29
LINC00348-201ENST00000428761 SGIP1Q9BQI5 828 aa13.26□□□□□ -0.29
LINC00348-201ENST00000428761 SCUBE2Q9NQ36 999 aa13.24□□□□□ -0.29
LINC00348-201ENST00000428761 SEC24BO95487 1268 aa13.23□□□□□ -0.29
LINC00348-201ENST00000428761 POTEMA6NI47 508 aa13.22□□□□□ -0.29
LINC00348-201ENST00000428761 IFNL1Q8IU54 200 aa13.22□□□□□ -0.29
LINC00348-201ENST00000428761 TRIM35Q9UPQ4 493 aa13.21□□□□□ -0.29
LINC00348-201ENST00000428761 COLQQ9Y215 455 aaPredicted RBP13.2□□□□□ -0.3
LINC00348-201ENST00000428761 DCAF8Q5TAQ9 597 aa13.19□□□□□ -0.3
LINC00348-201ENST00000428761 POTEGQ6S5H5 508 aa13.19□□□□□ -0.3
LINC00348-201ENST00000428761 TMEM106CQ9BVX2 250 aa13.15□□□□□ -0.3
LINC00348-201ENST00000428761 FAM163AQ96GL9 167 aaPredicted RBP13.14□□□□□ -0.31
LINC00348-201ENST00000428761 PYGBP11216 843 aa13.13□□□□□ -0.31
LINC00348-201ENST00000428761 IER5LQ5T953 404 aa13.13□□□□□ -0.31
LINC00348-201ENST00000428761 GSE1Q14687 1217 aa13.1□□□□□ -0.31
LINC00348-201ENST00000428761 CIZ1Q9ULV3 898 aaPredicted RBP13.07□□□□□ -0.32
LINC00348-201ENST00000428761 PCDHB8Q9UN66 801 aa13.05□□□□□ -0.32
LINC00348-201ENST00000428761 LCE2DQ5TA82 110 aaPredicted RBP13.04□□□□□ -0.32
LINC00348-201ENST00000428761 PLCG2P16885 1265 aa13.03□□□□□ -0.32
LINC00348-201ENST00000428761 CHRM1P11229 460 aaPredicted RBP12.98□□□□□ -0.33
LINC00348-201ENST00000428761 IRX5P78411 483 aaPredicted RBP12.97□□□□□ -0.33
LINC00348-201ENST00000428761 SLAIN1Q8ND83 568 aa12.97□□□□□ -0.33
LINC00348-201ENST00000428761 PCDH10Q9P2E7 1040 aa12.97□□□□□ -0.33
LINC00348-201ENST00000428761 OCEL1Q9H607 264 aa12.94□□□□□ -0.34
LINC00348-201ENST00000428761 PKD2Q13563 968 aa12.93□□□□□ -0.34
LINC00348-201ENST00000428761 TRIM41Q8WV44 630 aa12.91□□□□□ -0.34
LINC00348-201ENST00000428761 ZNF467Q7Z7K2 595 aaPredicted RBP12.89□□□□□ -0.35
LINC00348-201ENST00000428761 GOLGA2Q08379 1002 aa12.86□□□□□ -0.35
LINC00348-201ENST00000428761 ECM2O94769 699 aaPredicted RBP12.83□□□□□ -0.36
LINC00348-201ENST00000428761 MKRN3Q13064 507 aaKnown RBP12.82□□□□□ -0.36
LINC00348-201ENST00000428761 ST18O60284 1047 aa12.81□□□□□ -0.36
LINC00348-201ENST00000428761 PSEN1P49768 467 aa12.81□□□□□ -0.36
LINC00348-201ENST00000428761 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.81□□□□□ -0.36
LINC00348-201ENST00000428761 RNF25Q96BH1 459 aaPredicted RBP12.8□□□□□ -0.36
LINC00348-201ENST00000428761 CDAN1Q8IWY9 1227 aa12.77□□□□□ -0.37
LINC00348-201ENST00000428761 PDCD7Q8N8D1 485 aaKnown RBP12.77□□□□□ -0.37
LINC00348-201ENST00000428761 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.76□□□□□ -0.37
LINC00348-201ENST00000428761 RGL2O15211 777 aa12.74□□□□□ -0.37
LINC00348-201ENST00000428761 RIOK3O14730 519 aaKnown RBP12.73□□□□□ -0.37
LINC00348-201ENST00000428761 PDAP1Q13442 181 aaKnown RBP12.73□□□□□ -0.37
LINC00348-201ENST00000428761 L3MBTL3Q96JM7 780 aaPredicted RBP12.72□□□□□ -0.37
LINC00348-201ENST00000428761 SNPHO15079 494 aa12.71□□□□□ -0.37
LINC00348-201ENST00000428761 C3orf67Q6ZVT6 689 aa12.71□□□□□ -0.37
LINC00348-201ENST00000428761 CABP2Q9NPB3 220 aa12.68□□□□□ -0.38
LINC00348-201ENST00000428761 VGFO15240 615 aaPredicted RBP12.65□□□□□ -0.38
LINC00348-201ENST00000428761 TMEM121BQ9BXQ6 578 aaPredicted RBP12.65□□□□□ -0.38
LINC00348-201ENST00000428761 DPY19L2Q6NUT2 758 aa12.63□□□□□ -0.39
LINC00348-201ENST00000428761 MARVELD3Q96A59 401 aa12.63□□□□□ -0.39
LINC00348-201ENST00000428761 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.62□□□□□ -0.39
LINC00348-201ENST00000428761 ZFP91Q96JP5 570 aaPredicted RBP12.62□□□□□ -0.39
LINC00348-201ENST00000428761 ILDR1Q86SU0 546 aaPredicted RBP12.59□□□□□ -0.39
LINC00348-201ENST00000428761 G3V3G9 751 aa12.58□□□□□ -0.4
LINC00348-201ENST00000428761 TAOK2Q9UL54 1235 aa12.58□□□□□ -0.4
LINC00348-201ENST00000428761 BOLA1Q9Y3E2 137 aa12.54□□□□□ -0.4
LINC00348-201ENST00000428761 EMP3P54852 163 aa12.52□□□□□ -0.41
LINC00348-201ENST00000428761 BCL11BQ9C0K0 894 aaPredicted RBP12.52□□□□□ -0.41
LINC00348-201ENST00000428761 STK25O00506 426 aa12.5□□□□□ -0.41
LINC00348-201ENST00000428761 EFCAB3Q8N7B9 438 aa12.5□□□□□ -0.41
LINC00348-201ENST00000428761 STK24Q9Y6E0 443 aa12.49□□□□□ -0.41
LINC00348-201ENST00000428761 CHGAP10645 457 aaKnown RBP12.45□□□□□ -0.42
LINC00348-201ENST00000428761 SPNS2Q8IVW8 549 aa12.45□□□□□ -0.42
LINC00348-201ENST00000428761 FAM205CA6NFA0 338 aa12.44□□□□□ -0.42
LINC00348-201ENST00000428761 HS6ST3Q8IZP7 471 aa12.44□□□□□ -0.42
LINC00348-201ENST00000428761 DCAF8L2P0C7V8 631 aa12.43□□□□□ -0.42
LINC00348-201ENST00000428761 MMRN1Q13201 1228 aa12.42□□□□□ -0.42
LINC00348-201ENST00000428761 HS3ST6Q96QI5 342 aa12.42□□□□□ -0.42
LINC00348-201ENST00000428761 POTEB3A0JP26 581 aa12.4□□□□□ -0.42
LINC00348-201ENST00000428761 SOX12O15370 315 aa12.4□□□□□ -0.42
LINC00348-201ENST00000428761 POTEBQ6S5H4 581 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms