RNA–Protein interactions for RNA: ENST00000426882.5

HCG18-235, Transcript of HLA complex group 18, humanhuman

TSL 1 (best) BASIC

Gene HCG18, Length 4,862 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-235ENST00000426882 SOGA1O94964 1423 aa26.62■■□□□ 1.85
HCG18-235ENST00000426882 SLC24A1O60721 1099 aa26.6■■□□□ 1.85
HCG18-235ENST00000426882 CCDC136Q96JN2 1154 aa26.59■■□□□ 1.85
HCG18-235ENST00000426882 IRX6P78412 446 aaPredicted RBP26.55■■□□□ 1.84
HCG18-235ENST00000426882 MROH2BQ7Z745 1585 aa26.53■■□□□ 1.84
HCG18-235ENST00000426882 NPM1P06748 294 aaKnown RBP eCLIP26.52■■□□□ 1.84
HCG18-235ENST00000426882 STAG3Q9UJ98 1225 aa26.47■■□□□ 1.83
HCG18-235ENST00000426882 SIN3AQ96ST3 1273 aa26.47■■□□□ 1.83
HCG18-235ENST00000426882 WDR43Q15061 677 aaKnown RBP eCLIP26.44■■□□□ 1.82
HCG18-235ENST00000426882 ESF1Q9H501 851 aaKnown RBP26.44■■□□□ 1.82
HCG18-235ENST00000426882 PLEKHD1A6NEE1 506 aa26.44■■□□□ 1.82
HCG18-235ENST00000426882 CCNB3Q8WWL7 1395 aa26.41■■□□□ 1.82
HCG18-235ENST00000426882 CCDC88BA6NC98 1476 aa26.41■■□□□ 1.82
HCG18-235ENST00000426882 CFDP1Q9UEE9 299 aaPredicted RBP26.38■■□□□ 1.81
HCG18-235ENST00000426882 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.37■■□□□ 1.81
HCG18-235ENST00000426882 ABCC8Q09428 1581 aa26.37■■□□□ 1.81
HCG18-235ENST00000426882 VPS8Q8N3P4 1428 aa26.33■■□□□ 1.81
HCG18-235ENST00000426882 KCNH8Q96L42 1107 aa26.33■■□□□ 1.8
HCG18-235ENST00000426882 CARMIL1Q5VZK9 1371 aa26.32■■□□□ 1.8
HCG18-235ENST00000426882 RGL3Q3MIN7 710 aa26.32■■□□□ 1.8
HCG18-235ENST00000426882 UPF2Q9HAU5 1272 aaKnown RBP26.32■■□□□ 1.8
HCG18-235ENST00000426882 FHAD1B1AJZ9 1412 aa26.3■■□□□ 1.8
HCG18-235ENST00000426882 CUX2O14529 1486 aa26.3■■□□□ 1.8
HCG18-235ENST00000426882 NBR1Q14596 966 aa26.24■■□□□ 1.79
HCG18-235ENST00000426882 SUPT16HQ9Y5B9 1047 aaKnown RBP26.24■■□□□ 1.79
HCG18-235ENST00000426882 SENP3-EIF4A1A0A087X0R7 540 aa26.23■■□□□ 1.79
HCG18-235ENST00000426882 KANK4Q5T7N3 995 aaPredicted RBP26.22■■□□□ 1.79
HCG18-235ENST00000426882 HSP90AA1P07900 732 aaKnown RBP26.21■■□□□ 1.79
HCG18-235ENST00000426882 CARD11Q9BXL7 1154 aa26.2■■□□□ 1.79
HCG18-235ENST00000426882 PLPPR3Q6T4P5 718 aa26.15■■□□□ 1.78
HCG18-235ENST00000426882 TIMELESSQ9UNS1 1208 aa26.14■■□□□ 1.78
HCG18-235ENST00000426882 WIZO95785 1651 aa26.12■■□□□ 1.77
HCG18-235ENST00000426882 SETD5Q9C0A6 1442 aa26.11■■□□□ 1.77
HCG18-235ENST00000426882 TOP2AP11388 1531 aaKnown RBP26.06■■□□□ 1.76
HCG18-235ENST00000426882 SENP3Q9H4L4 574 aaPredicted RBP26.06■■□□□ 1.76
HCG18-235ENST00000426882 KNSTRNQ9Y448 316 aa26.05■■□□□ 1.76
HCG18-235ENST00000426882 CDCA8Q53HL2 280 aa26.03■■□□□ 1.76
HCG18-235ENST00000426882 SMARCA2P51531 1590 aa26.03■■□□□ 1.76
HCG18-235ENST00000426882 EIF4G1Q04637 1599 aaKnown RBP26.01■■□□□ 1.75
HCG18-235ENST00000426882 ARHGAP35Q9NRY4 1499 aa26■■□□□ 1.75
HCG18-235ENST00000426882 ANP32BQ92688 251 aaKnown RBP26■■□□□ 1.75
HCG18-235ENST00000426882 PPP4R2Q9NY27 417 aa25.97■■□□□ 1.75
HCG18-235ENST00000426882 RAB3GAP2Q9H2M9 1393 aa25.97■■□□□ 1.75
HCG18-235ENST00000426882 CCER2I3L3R5 266 aa25.94■■□□□ 1.74
HCG18-235ENST00000426882 ERCC6Q03468 1493 aa25.91■■□□□ 1.74
HCG18-235ENST00000426882 EIF5BO60841 1220 aaKnown RBP25.91■■□□□ 1.74
HCG18-235ENST00000426882 DCAF11Q8TEB1 546 aa25.91■■□□□ 1.74
HCG18-235ENST00000426882 HSPA5P11021 654 aaKnown RBP25.9■■□□□ 1.74
HCG18-235ENST00000426882 CFAP53Q96M91 514 aa25.9■■□□□ 1.74
HCG18-235ENST00000426882 PPP1R15AO75807 674 aaPredicted RBP25.88■■□□□ 1.73
HCG18-235ENST00000426882 ANP32EQ9BTT0 268 aa25.88■■□□□ 1.73
HCG18-235ENST00000426882 ARXQ96QS3 562 aa25.86■■□□□ 1.73
HCG18-235ENST00000426882 DDRGK1Q96HY6 314 aa25.86■■□□□ 1.73
HCG18-235ENST00000426882 MYH16Q9H6N6 1097 aa25.86■■□□□ 1.73
HCG18-235ENST00000426882 TDRD9Q8NDG6 1382 aaKnown RBP25.85■■□□□ 1.73
HCG18-235ENST00000426882 RAPGEF2Q9Y4G8 1499 aa25.85■■□□□ 1.73
HCG18-235ENST00000426882 FOXD1Q16676 465 aa25.85■■□□□ 1.73
HCG18-235ENST00000426882 CC2D1BQ5T0F9 858 aaKnown RBP25.85■■□□□ 1.73
HCG18-235ENST00000426882 B4GALNT3Q6L9W6 998 aa25.83■■□□□ 1.73
HCG18-235ENST00000426882 FMN1Q68DA7 1419 aa25.82■■□□□ 1.72
HCG18-235ENST00000426882 NEUROD2Q15784 382 aa25.82■■□□□ 1.72
HCG18-235ENST00000426882 RUSC2Q8N2Y8 1516 aa25.8■■□□□ 1.72
HCG18-235ENST00000426882 PKD2Q13563 968 aa25.79■■□□□ 1.72
HCG18-235ENST00000426882 BECN1Q14457 450 aa25.77■■□□□ 1.72
HCG18-235ENST00000426882 TMF1P82094 1093 aa25.76■■□□□ 1.71
HCG18-235ENST00000426882 MPHOSPH9Q99550 1183 aa25.76■■□□□ 1.71
HCG18-235ENST00000426882 PPM1GO15355 546 aaPredicted RBP25.74■■□□□ 1.71
HCG18-235ENST00000426882 ATAD2BQ9ULI0 1458 aa25.73■■□□□ 1.71
HCG18-235ENST00000426882 TNNT2P45379 298 aaPredicted RBP25.71■■□□□ 1.71
HCG18-235ENST00000426882 FHOD3Q2V2M9 1422 aa25.71■■□□□ 1.71
HCG18-235ENST00000426882 PDS5BQ9NTI5 1447 aa25.71■■□□□ 1.71
HCG18-235ENST00000426882 CADPSQ9ULU8 1353 aa25.71■■□□□ 1.71
HCG18-235ENST00000426882 SMARCA4P51532 1647 aa25.71■■□□□ 1.71
HCG18-235ENST00000426882 FTSJ3Q8IY81 847 aaKnown RBP25.69■■□□□ 1.7
HCG18-235ENST00000426882 RGS3P49796 1198 aa25.68■■□□□ 1.7
HCG18-235ENST00000426882 MAPK8IP3Q9UPT6 1336 aa25.66■■□□□ 1.7
HCG18-235ENST00000426882 FRAT1Q92837 279 aaPredicted RBP25.66■■□□□ 1.7
HCG18-235ENST00000426882 NUDCQ9Y266 331 aa25.66■■□□□ 1.7
HCG18-235ENST00000426882 C14orf37Q86TY3 774 aa25.64■■□□□ 1.7
HCG18-235ENST00000426882 DHX57Q6P158 1386 aaKnown RBP25.64■■□□□ 1.7
HCG18-235ENST00000426882 POGKQ9P215 609 aa25.64■■□□□ 1.7
HCG18-235ENST00000426882 CARMIL2Q6F5E8 1435 aa25.61■■□□□ 1.69
HCG18-235ENST00000426882 PLEKHG5O94827 1062 aa25.61■■□□□ 1.69
HCG18-235ENST00000426882 ZBTB7CA1YPR0 619 aa25.61■■□□□ 1.69
HCG18-235ENST00000426882 L3MBTL2Q969R5 705 aa25.61■■□□□ 1.69
HCG18-235ENST00000426882 NOP58Q9Y2X3 529 aaKnown RBP25.6■■□□□ 1.69
HCG18-235ENST00000426882 NUP155O75694 1391 aa25.6■■□□□ 1.69
HCG18-235ENST00000426882 LAS1LQ9Y4W2 734 aaKnown RBP25.58■■□□□ 1.69
HCG18-235ENST00000426882 KANK1Q14678 1352 aa25.58■■□□□ 1.69
HCG18-235ENST00000426882 RBM19Q9Y4C8 960 aaKnown RBP25.58■■□□□ 1.69
HCG18-235ENST00000426882 U2SURPO15042 1029 aaKnown RBP25.56■■□□□ 1.68
HCG18-235ENST00000426882 ANKRD30AQ9BXX3 1397 aa25.55■■□□□ 1.68
HCG18-235ENST00000426882 ARID4BQ4LE39 1312 aaPredicted RBP25.55■■□□□ 1.68
HCG18-235ENST00000426882 KTN1Q86UP2 1357 aaKnown RBP25.54■■□□□ 1.68
HCG18-235ENST00000426882 ROCK2O75116 1388 aaKnown RBP25.5■■□□□ 1.67
HCG18-235ENST00000426882 ERICH6BQ5W0A0 696 aa25.49■■□□□ 1.67
HCG18-235ENST00000426882 MORC1Q86VD1 984 aa25.47■■□□□ 1.67
HCG18-235ENST00000426882 GOLGA6L22H0YM25 854 aa25.47■■□□□ 1.67
HCG18-235ENST00000426882 RALBP1Q15311 655 aa25.46■■□□□ 1.67
HCG18-235ENST00000426882 MS4A1P11836 297 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms