RNA–Protein interactions for RNA: ENST00000424953.1

LINC02238-201, Transcript of long intergenic non-protein coding RNA 2238, humanhuman

TSL 5 BASIC

Gene LINC02238, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02238-201ENST00000424953 TSPYL2Q9H2G4 693 aaPredicted RBP12.67□□□□□ -0.38
LINC02238-201ENST00000424953 FAM212AQ96EL1 285 aa12.66□□□□□ -0.38
LINC02238-201ENST00000424953 DCAF8Q5TAQ9 597 aa12.65□□□□□ -0.38
LINC02238-201ENST00000424953 CIZ1Q9ULV3 898 aaPredicted RBP12.63□□□□□ -0.39
LINC02238-201ENST00000424953 GSE1Q14687 1217 aa12.61□□□□□ -0.39
LINC02238-201ENST00000424953 DCBLD2Q96PD2 775 aa12.61□□□□□ -0.39
LINC02238-201ENST00000424953 POTEIP0CG38 1075 aa12.59□□□□□ -0.39
LINC02238-201ENST00000424953 LHX8Q68G74 356 aa12.58□□□□□ -0.4
LINC02238-201ENST00000424953 CCDC61Q9Y6R9 512 aa12.56□□□□□ -0.4
LINC02238-201ENST00000424953 PKD2Q13563 968 aa12.53□□□□□ -0.4
LINC02238-201ENST00000424953 AMER1Q5JTC6 1135 aaPredicted RBP12.53□□□□□ -0.4
LINC02238-201ENST00000424953 PHF12Q96QT6 1004 aa12.53□□□□□ -0.4
LINC02238-201ENST00000424953 GALR2O43603 387 aaPredicted RBP12.52□□□□□ -0.41
LINC02238-201ENST00000424953 RTN4Q9NQC3 1192 aaKnown RBP12.52□□□□□ -0.41
LINC02238-201ENST00000424953 PYGBP11216 843 aa12.5□□□□□ -0.41
LINC02238-201ENST00000424953 TRIM41Q8WV44 630 aa12.46□□□□□ -0.41
LINC02238-201ENST00000424953 ECM2O94769 699 aaPredicted RBP12.45□□□□□ -0.42
LINC02238-201ENST00000424953 KIF12Q96FN5 646 aa12.44□□□□□ -0.42
LINC02238-201ENST00000424953 CHRM1P11229 460 aaPredicted RBP12.43□□□□□ -0.42
LINC02238-201ENST00000424953 MAP3K13O43283 966 aa12.42□□□□□ -0.42
LINC02238-201ENST00000424953 PCDHB13Q9Y5F0 798 aa12.38□□□□□ -0.43
LINC02238-201ENST00000424953 MS4A3Q96HJ5 214 aa12.36□□□□□ -0.43
LINC02238-201ENST00000424953 RGL2O15211 777 aa12.35□□□□□ -0.43
LINC02238-201ENST00000424953 SGIP1Q9BQI5 828 aa12.35□□□□□ -0.43
LINC02238-201ENST00000424953 RNF25Q96BH1 459 aaPredicted RBP12.34□□□□□ -0.43
LINC02238-201ENST00000424953 IFNL1Q8IU54 200 aa12.33□□□□□ -0.44
LINC02238-201ENST00000424953 PCDHB8Q9UN66 801 aa12.33□□□□□ -0.44
LINC02238-201ENST00000424953 ZNF467Q7Z7K2 595 aaPredicted RBP12.31□□□□□ -0.44
LINC02238-201ENST00000424953 RIOK3O14730 519 aaKnown RBP12.28□□□□□ -0.44
LINC02238-201ENST00000424953 ASTLQ6HA08 431 aaPredicted RBP12.28□□□□□ -0.44
LINC02238-201ENST00000424953 ATMINO43313 823 aaPredicted RBP12.26□□□□□ -0.45
LINC02238-201ENST00000424953 PELP1Q8IZL8 1130 aaKnown RBP12.26□□□□□ -0.45
LINC02238-201ENST00000424953 TRPC6Q9Y210 931 aa12.26□□□□□ -0.45
LINC02238-201ENST00000424953 SLC39A7Q92504 469 aa12.22□□□□□ -0.45
LINC02238-201ENST00000424953 VGFO15240 615 aaPredicted RBP12.21□□□□□ -0.45
LINC02238-201ENST00000424953 DCAF8L2P0C7V8 631 aa12.21□□□□□ -0.45
LINC02238-201ENST00000424953 C7P10643 843 aa12.21□□□□□ -0.45
LINC02238-201ENST00000424953 PDAP1Q13442 181 aaKnown RBP12.2□□□□□ -0.46
LINC02238-201ENST00000424953 METRNQ9UJH8 293 aa12.2□□□□□ -0.46
LINC02238-201ENST00000424953 PSEN1P49768 467 aa12.19□□□□□ -0.46
LINC02238-201ENST00000424953 POTEB2H3BUK9 544 aa12.18□□□□□ -0.46
LINC02238-201ENST00000424953 TAOK2Q9UL54 1235 aa12.18□□□□□ -0.46
LINC02238-201ENST00000424953 TIE1P35590 1138 aa12.17□□□□□ -0.46
LINC02238-201ENST00000424953 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.16□□□□□ -0.46
LINC02238-201ENST00000424953 ATN1P54259 1190 aaPredicted RBP12.16□□□□□ -0.46
LINC02238-201ENST00000424953 ZFP91Q96JP5 570 aaPredicted RBP12.16□□□□□ -0.46
LINC02238-201ENST00000424953 BMP2KQ9NSY1 1161 aaPredicted RBP12.16□□□□□ -0.46
LINC02238-201ENST00000424953 OTUD5Q96G74 571 aa12.15□□□□□ -0.46
LINC02238-201ENST00000424953 TMEM106CQ9BVX2 250 aa12.15□□□□□ -0.46
LINC02238-201ENST00000424953 TTLL13PA6NNM8 815 aa12.13□□□□□ -0.47
LINC02238-201ENST00000424953 STK25O00506 426 aa12.1□□□□□ -0.47
LINC02238-201ENST00000424953 CHGAP10645 457 aaKnown RBP12.09□□□□□ -0.47
LINC02238-201ENST00000424953 BCL11BQ9C0K0 894 aaPredicted RBP12.09□□□□□ -0.47
LINC02238-201ENST00000424953 STK24Q9Y6E0 443 aa12.08□□□□□ -0.48
LINC02238-201ENST00000424953 MAMSTRQ6ZN01 415 aa12.06□□□□□ -0.48
LINC02238-201ENST00000424953 HS6ST3Q8IZP7 471 aa12.06□□□□□ -0.48
LINC02238-201ENST00000424953 TRIM35Q9UPQ4 493 aa12.06□□□□□ -0.48
LINC02238-201ENST00000424953 CABP2Q9NPB3 220 aa12.05□□□□□ -0.48
LINC02238-201ENST00000424953 GOLGA2Q08379 1002 aa12.01□□□□□ -0.49
LINC02238-201ENST00000424953 SEC24BO95487 1268 aa12□□□□□ -0.49
LINC02238-201ENST00000424953 POTEJP0CG39 1038 aa12□□□□□ -0.49
LINC02238-201ENST00000424953 EFCAB3Q8N7B9 438 aa11.99□□□□□ -0.49
LINC02238-201ENST00000424953 SCUBE2Q9NQ36 999 aa11.99□□□□□ -0.49
LINC02238-201ENST00000424953 POTEFA5A3E0 1075 aa11.97□□□□□ -0.49
LINC02238-201ENST00000424953 MKRN3Q13064 507 aaKnown RBP11.97□□□□□ -0.49
LINC02238-201ENST00000424953 IER5LQ5T953 404 aa11.97□□□□□ -0.49
LINC02238-201ENST00000424953 DNAJC5Q9H3Z4 198 aa11.93□□□□□ -0.5
LINC02238-201ENST00000424953 COLQQ9Y215 455 aaPredicted RBP11.93□□□□□ -0.5
LINC02238-201ENST00000424953 NKX1-1Q15270 411 aaPredicted RBP11.91□□□□□ -0.5
LINC02238-201ENST00000424953 SOX12O15370 315 aa11.9□□□□□ -0.5
LINC02238-201ENST00000424953 BBXQ8WY36 941 aaPredicted RBP11.9□□□□□ -0.5
LINC02238-201ENST00000424953 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.89□□□□□ -0.51
LINC02238-201ENST00000424953 IRX5P78411 483 aaPredicted RBP11.88□□□□□ -0.51
LINC02238-201ENST00000424953 MFRPQ9BY79 579 aa11.88□□□□□ -0.51
LINC02238-201ENST00000424953 PHF8Q9UPP1 1060 aa11.88□□□□□ -0.51
LINC02238-201ENST00000424953 PLCG2P16885 1265 aa11.85□□□□□ -0.51
LINC02238-201ENST00000424953 NLRP6P59044 892 aa11.84□□□□□ -0.51
LINC02238-201ENST00000424953 ILDR1Q86SU0 546 aaPredicted RBP11.84□□□□□ -0.51
LINC02238-201ENST00000424953 OCEL1Q9H607 264 aa11.84□□□□□ -0.51
LINC02238-201ENST00000424953 FBXO22Q8NEZ5 403 aa11.83□□□□□ -0.52
LINC02238-201ENST00000424953 POTEMA6NI47 508 aa11.82□□□□□ -0.52
LINC02238-201ENST00000424953 PDCD7Q8N8D1 485 aaKnown RBP11.82□□□□□ -0.52
LINC02238-201ENST00000424953 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.82□□□□□ -0.52
LINC02238-201ENST00000424953 MS4A4AQ96JQ5 239 aa11.81□□□□□ -0.52
LINC02238-201ENST00000424953 POTEGQ6S5H5 508 aa11.8□□□□□ -0.52
LINC02238-201ENST00000424953 FAM163AQ96GL9 167 aaPredicted RBP11.8□□□□□ -0.52
LINC02238-201ENST00000424953 GTPBP6O43824 516 aaPredicted RBP11.78□□□□□ -0.52
LINC02238-201ENST00000424953 DPY19L2Q6NUT2 758 aa11.78□□□□□ -0.52
LINC02238-201ENST00000424953 PAXIP1Q6ZW49 1069 aaPredicted RBP11.75□□□□□ -0.53
LINC02238-201ENST00000424953 RYDENQ9NUL5 291 aaKnown RBP11.75□□□□□ -0.53
LINC02238-201ENST00000424953 SPRYD3Q8NCJ5 442 aa11.74□□□□□ -0.53
LINC02238-201ENST00000424953 CFAP44Q96MT7 982 aa11.74□□□□□ -0.53
LINC02238-201ENST00000424953 PLSCR2Q9NRY7 297 aa11.74□□□□□ -0.53
LINC02238-201ENST00000424953 PPP1R37O75864 691 aa11.73□□□□□ -0.53
LINC02238-201ENST00000424953 SLAIN1Q8ND83 568 aa11.72□□□□□ -0.53
LINC02238-201ENST00000424953 PCDH10Q9P2E7 1040 aa11.7□□□□□ -0.54
LINC02238-201ENST00000424953 L3MBTL3Q96JM7 780 aaPredicted RBP11.69□□□□□ -0.54
LINC02238-201ENST00000424953 LCE2DQ5TA82 110 aaPredicted RBP11.68□□□□□ -0.54
LINC02238-201ENST00000424953 BOLA1Q9Y3E2 137 aa11.67□□□□□ -0.54
LINC02238-201ENST00000424953 G3V3G9 751 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms