RNA–Protein interactions for RNA: ENST00000422875.5

TRAPPC10-203, Transcript of trafficking protein particle complex 10, humanhuman

TSL 1 (best)

Gene TRAPPC10, Length 5,267 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-203ENST00000422875 WDR43Q15061 677 aaKnown RBP eCLIP23.39■■□□□ 1.34
TRAPPC10-203ENST00000422875 GOLGA3Q08378 1498 aa23.34■■□□□ 1.33
TRAPPC10-203ENST00000422875 TNIKQ9UKE5 1360 aa23.3■■□□□ 1.32
TRAPPC10-203ENST00000422875 GLIPR1L2Q4G1C9 344 aa23.29■■□□□ 1.32
TRAPPC10-203ENST00000422875 TSPY4P0CV99 314 aa23.27■■□□□ 1.32
TRAPPC10-203ENST00000422875 TSPY10P0CW01 314 aa23.27■■□□□ 1.32
TRAPPC10-203ENST00000422875 EEA1Q15075 1411 aa23.26■■□□□ 1.31
TRAPPC10-203ENST00000422875 B4GALNT3Q6L9W6 998 aa23.25■■□□□ 1.31
TRAPPC10-203ENST00000422875 RTN4Q9NQC3 1192 aaKnown RBP23.25■■□□□ 1.31
TRAPPC10-203ENST00000422875 PPP4R2Q9NY27 417 aa23.23■■□□□ 1.31
TRAPPC10-203ENST00000422875 LAS1LQ9Y4W2 734 aaKnown RBP23.23■■□□□ 1.31
TRAPPC10-203ENST00000422875 RGL3Q3MIN7 710 aa23.17■■□□□ 1.3
TRAPPC10-203ENST00000422875 RBM19Q9Y4C8 960 aaKnown RBP23.17■■□□□ 1.3
TRAPPC10-203ENST00000422875 DDRGK1Q96HY6 314 aa23.17■■□□□ 1.3
TRAPPC10-203ENST00000422875 WRNQ14191 1432 aaPredicted RBP eCLIP23.17■■□□□ 1.3
TRAPPC10-203ENST00000422875 NOP58Q9Y2X3 529 aaKnown RBP23.14■■□□□ 1.3
TRAPPC10-203ENST00000422875 STAG3Q9UJ98 1225 aa23.11■■□□□ 1.29
TRAPPC10-203ENST00000422875 BECN1Q14457 450 aa23.09■■□□□ 1.29
TRAPPC10-203ENST00000422875 SENP3Q9H4L4 574 aaPredicted RBP23.07■■□□□ 1.28
TRAPPC10-203ENST00000422875 PPM1GO15355 546 aaPredicted RBP23.06■■□□□ 1.28
TRAPPC10-203ENST00000422875 RGS3P49796 1198 aa23.06■■□□□ 1.28
TRAPPC10-203ENST00000422875 CEP164Q9UPV0 1460 aa23.06■■□□□ 1.28
TRAPPC10-203ENST00000422875 CARD11Q9BXL7 1154 aa23.04■■□□□ 1.28
TRAPPC10-203ENST00000422875 SOGA1O94964 1423 aa23.02■■□□□ 1.28
TRAPPC10-203ENST00000422875 TSHZ2Q9NRE2 1034 aa23.02■■□□□ 1.27
TRAPPC10-203ENST00000422875 TRIM44Q96DX7 344 aaPredicted RBP23.01■■□□□ 1.27
TRAPPC10-203ENST00000422875 CCNB3Q8WWL7 1395 aa23.01■■□□□ 1.27
TRAPPC10-203ENST00000422875 DEKP35659 375 aaKnown RBP23■■□□□ 1.27
TRAPPC10-203ENST00000422875 NEUROD2Q15784 382 aa22.98■■□□□ 1.27
TRAPPC10-203ENST00000422875 KNSTRNQ9Y448 316 aa22.94■■□□□ 1.26
TRAPPC10-203ENST00000422875 MYH16Q9H6N6 1097 aa22.94■■□□□ 1.26
TRAPPC10-203ENST00000422875 ESF1Q9H501 851 aaKnown RBP22.94■■□□□ 1.26
TRAPPC10-203ENST00000422875 CCER2I3L3R5 266 aa22.93■■□□□ 1.26
TRAPPC10-203ENST00000422875 PLPPR3Q6T4P5 718 aa22.93■■□□□ 1.26
TRAPPC10-203ENST00000422875 ERICH6BQ5W0A0 696 aa22.92■■□□□ 1.26
TRAPPC10-203ENST00000422875 KANK4Q5T7N3 995 aaPredicted RBP22.91■■□□□ 1.26
TRAPPC10-203ENST00000422875 KIF27Q86VH2 1401 aa22.91■■□□□ 1.26
TRAPPC10-203ENST00000422875 CFDP1Q9UEE9 299 aaPredicted RBP22.91■■□□□ 1.26
TRAPPC10-203ENST00000422875 CHMP7Q8WUX9 453 aaPredicted RBP22.9■■□□□ 1.26
TRAPPC10-203ENST00000422875 NCLP19338 710 aaKnown RBP22.9■■□□□ 1.26
TRAPPC10-203ENST00000422875 CC2D1BQ5T0F9 858 aaKnown RBP22.88■■□□□ 1.25
TRAPPC10-203ENST00000422875 CECR2Q9BXF3 1484 aa22.87■■□□□ 1.25
TRAPPC10-203ENST00000422875 FRAT1Q92837 279 aaPredicted RBP22.87■■□□□ 1.25
TRAPPC10-203ENST00000422875 KCNH8Q96L42 1107 aa22.87■■□□□ 1.25
TRAPPC10-203ENST00000422875 RB1CC1Q8TDY2 1594 aa22.85■■□□□ 1.25
TRAPPC10-203ENST00000422875 GOLGA6L22H0YM25 854 aa22.85■■□□□ 1.25
TRAPPC10-203ENST00000422875 PLEKHD1A6NEE1 506 aa22.85■■□□□ 1.25
TRAPPC10-203ENST00000422875 HSPA5P11021 654 aaKnown RBP22.83■■□□□ 1.25
TRAPPC10-203ENST00000422875 NAP1L5Q96NT1 182 aaPredicted RBP22.82■■□□□ 1.24
TRAPPC10-203ENST00000422875 TIMELESSQ9UNS1 1208 aa22.82■■□□□ 1.24
TRAPPC10-203ENST00000422875 FTSJ3Q8IY81 847 aaKnown RBP22.82■■□□□ 1.24
TRAPPC10-203ENST00000422875 NPM1P06748 294 aaKnown RBP eCLIP22.8■■□□□ 1.24
TRAPPC10-203ENST00000422875 TPRNQ4KMQ1 711 aa22.79■■□□□ 1.24
TRAPPC10-203ENST00000422875 TNNT2P45379 298 aaPredicted RBP22.79■■□□□ 1.24
TRAPPC10-203ENST00000422875 VPS8Q8N3P4 1428 aa22.78■■□□□ 1.24
TRAPPC10-203ENST00000422875 CFAP53Q96M91 514 aa22.76■■□□□ 1.23
TRAPPC10-203ENST00000422875 FOXD1Q16676 465 aa22.75■■□□□ 1.23
TRAPPC10-203ENST00000422875 CDCA8Q53HL2 280 aa22.75■■□□□ 1.23
TRAPPC10-203ENST00000422875 SETD5Q9C0A6 1442 aa22.74■■□□□ 1.23
TRAPPC10-203ENST00000422875 PTMAP06454 111 aaKnown RBP22.73■■□□□ 1.23
TRAPPC10-203ENST00000422875 DCAF11Q8TEB1 546 aa22.73■■□□□ 1.23
TRAPPC10-203ENST00000422875 RAB3GAP2Q9H2M9 1393 aa22.71■■□□□ 1.23
TRAPPC10-203ENST00000422875 BAZ1BQ9UIG0 1483 aaKnown RBP22.7■■□□□ 1.22
TRAPPC10-203ENST00000422875 PLEKHG5O94827 1062 aa22.69■■□□□ 1.22
TRAPPC10-203ENST00000422875 CCDC88BA6NC98 1476 aa22.68■■□□□ 1.22
TRAPPC10-203ENST00000422875 DNTTIP2Q5QJE6 756 aaKnown RBP22.68■■□□□ 1.22
TRAPPC10-203ENST00000422875 SPRYD3Q8NCJ5 442 aa22.67■■□□□ 1.22
TRAPPC10-203ENST00000422875 PPP1R15AO75807 674 aaPredicted RBP22.66■■□□□ 1.22
TRAPPC10-203ENST00000422875 ABCC8Q09428 1581 aa22.65■■□□□ 1.22
TRAPPC10-203ENST00000422875 FHAD1B1AJZ9 1412 aa22.62■■□□□ 1.21
TRAPPC10-203ENST00000422875 MAPK8IP3Q9UPT6 1336 aa22.61■■□□□ 1.21
TRAPPC10-203ENST00000422875 CARMIL1Q5VZK9 1371 aa22.6■■□□□ 1.21
TRAPPC10-203ENST00000422875 HSP90AB1P08238 724 aaKnown RBP22.6■■□□□ 1.21
TRAPPC10-203ENST00000422875 RCAN3Q9UKA8 241 aa22.6■■□□□ 1.21
TRAPPC10-203ENST00000422875 PLCB2Q00722 1185 aa22.59■■□□□ 1.21
TRAPPC10-203ENST00000422875 U2SURPO15042 1029 aaKnown RBP22.59■■□□□ 1.21
TRAPPC10-203ENST00000422875 ZBTB7CA1YPR0 619 aa22.58■■□□□ 1.2
TRAPPC10-203ENST00000422875 TMF1P82094 1093 aa22.57■■□□□ 1.2
TRAPPC10-203ENST00000422875 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.57■■□□□ 1.2
TRAPPC10-203ENST00000422875 BAZ1AQ9NRL2 1556 aaPredicted RBP22.57■■□□□ 1.2
TRAPPC10-203ENST00000422875 ARID4BQ4LE39 1312 aaPredicted RBP22.55■■□□□ 1.2
TRAPPC10-203ENST00000422875 SLKQ9H2G2 1235 aaPredicted RBP22.55■■□□□ 1.2
TRAPPC10-203ENST00000422875 NUDCQ9Y266 331 aa22.55■■□□□ 1.2
TRAPPC10-203ENST00000422875 C14orf37Q86TY3 774 aa22.54■■□□□ 1.2
TRAPPC10-203ENST00000422875 CASC1Q6TDU7 716 aa22.53■■□□□ 1.2
TRAPPC10-203ENST00000422875 IPO9Q96P70 1041 aaKnown RBP22.53■■□□□ 1.2
TRAPPC10-203ENST00000422875 PKD2Q13563 968 aa22.53■■□□□ 1.2
TRAPPC10-203ENST00000422875 CUX2O14529 1486 aa22.52■■□□□ 1.2
TRAPPC10-203ENST00000422875 TCERG1O14776 1098 aaKnown RBP22.52■■□□□ 1.2
TRAPPC10-203ENST00000422875 MROH2BQ7Z745 1585 aa22.51■■□□□ 1.19
TRAPPC10-203ENST00000422875 HSCBQ8IWL3 235 aa22.5■■□□□ 1.19
TRAPPC10-203ENST00000422875 GZF1Q9H116 711 aaPredicted RBP22.5■■□□□ 1.19
TRAPPC10-203ENST00000422875 MPHOSPH9Q99550 1183 aa22.5■■□□□ 1.19
TRAPPC10-203ENST00000422875 L3MBTL2Q969R5 705 aa22.48■■□□□ 1.19
TRAPPC10-203ENST00000422875 ARHGAP35Q9NRY4 1499 aa22.47■■□□□ 1.19
TRAPPC10-203ENST00000422875 L1TD1Q5T7N2 865 aaKnown RBP22.46■■□□□ 1.19
TRAPPC10-203ENST00000422875 DHX57Q6P158 1386 aaKnown RBP22.46■■□□□ 1.19
TRAPPC10-203ENST00000422875 NACADO15069 1562 aa22.44■■□□□ 1.18
TRAPPC10-203ENST00000422875 KTN1Q86UP2 1357 aaKnown RBP22.44■■□□□ 1.18
TRAPPC10-203ENST00000422875 MS4A1P11836 297 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms