RNA–Protein interactions for RNA: ENST00000421014.2

CCDC18-204, Transcript of coiled-coil domain containing 18, humanhuman

TSL 5

Gene CCDC18, Length 606 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-204ENST00000421014 METRNQ9UJH8 293 aa14.88□□□□□ -0.03
CCDC18-204ENST00000421014 PLSCR2Q9NRY7 297 aa14.87□□□□□ -0.03
CCDC18-204ENST00000421014 MIER1Q8N108 512 aa14.86□□□□□ -0.03
CCDC18-204ENST00000421014 CCDC61Q9Y6R9 512 aa14.85□□□□□ -0.03
CCDC18-204ENST00000421014 PLEKHG5O94827 1062 aa14.83□□□□□ -0.04
CCDC18-204ENST00000421014 SLC39A7Q92504 469 aa14.83□□□□□ -0.04
CCDC18-204ENST00000421014 C7P10643 843 aa14.81□□□□□ -0.04
CCDC18-204ENST00000421014 KIF12Q96FN5 646 aa14.79□□□□□ -0.04
CCDC18-204ENST00000421014 ATN1P54259 1190 aaPredicted RBP14.77□□□□□ -0.05
CCDC18-204ENST00000421014 POTEJP0CG39 1038 aa14.75□□□□□ -0.05
CCDC18-204ENST00000421014 RASEFQ8IZ41 740 aa14.75□□□□□ -0.05
CCDC18-204ENST00000421014 TRPC6Q9Y210 931 aa14.74□□□□□ -0.05
CCDC18-204ENST00000421014 MAP3K13O43283 966 aa14.72□□□□□ -0.05
CCDC18-204ENST00000421014 PLCD3Q8N3E9 789 aa14.71□□□□□ -0.05
CCDC18-204ENST00000421014 POTEMA6NI47 508 aa14.7□□□□□ -0.06
CCDC18-204ENST00000421014 BMP2KQ9NSY1 1161 aaPredicted RBP14.7□□□□□ -0.06
CCDC18-204ENST00000421014 MAMSTRQ6ZN01 415 aa14.67□□□□□ -0.06
CCDC18-204ENST00000421014 POTEGQ6S5H5 508 aa14.66□□□□□ -0.06
CCDC18-204ENST00000421014 TIE1P35590 1138 aa14.62□□□□□ -0.07
CCDC18-204ENST00000421014 SCUBE2Q9NQ36 999 aa14.61□□□□□ -0.07
CCDC18-204ENST00000421014 POTEFA5A3E0 1075 aa14.6□□□□□ -0.07
CCDC18-204ENST00000421014 TTLL13PA6NNM8 815 aa14.56□□□□□ -0.08
CCDC18-204ENST00000421014 FAM163AQ96GL9 167 aaPredicted RBP14.55□□□□□ -0.08
CCDC18-204ENST00000421014 ZBTB47Q9UFB7 747 aaPredicted RBP14.54□□□□□ -0.08
CCDC18-204ENST00000421014 PCDHB13Q9Y5F0 798 aa14.54□□□□□ -0.08
CCDC18-204ENST00000421014 SEC24BO95487 1268 aa14.53□□□□□ -0.08
CCDC18-204ENST00000421014 NUBP1P53384 320 aa14.52□□□□□ -0.09
CCDC18-204ENST00000421014 COLQQ9Y215 455 aaPredicted RBP14.52□□□□□ -0.09
CCDC18-204ENST00000421014 FKBP8Q14318 412 aa14.5□□□□□ -0.09
CCDC18-204ENST00000421014 TRIM35Q9UPQ4 493 aa14.49□□□□□ -0.09
CCDC18-204ENST00000421014 SGIP1Q9BQI5 828 aa14.47□□□□□ -0.09
CCDC18-204ENST00000421014 LCE2DQ5TA82 110 aaPredicted RBP14.46□□□□□ -0.09
CCDC18-204ENST00000421014 IFNL1Q8IU54 200 aa14.45□□□□□ -0.1
CCDC18-204ENST00000421014 FAM212AQ96EL1 285 aa14.45□□□□□ -0.1
CCDC18-204ENST00000421014 PCDH10Q9P2E7 1040 aa14.4□□□□□ -0.1
CCDC18-204ENST00000421014 IER5LQ5T953 404 aa14.39□□□□□ -0.11
CCDC18-204ENST00000421014 TMEM106CQ9BVX2 250 aa14.39□□□□□ -0.11
CCDC18-204ENST00000421014 DCAF8Q5TAQ9 597 aa14.35□□□□□ -0.11
CCDC18-204ENST00000421014 PYGBP11216 843 aa14.3□□□□□ -0.12
CCDC18-204ENST00000421014 PLCG2P16885 1265 aa14.29□□□□□ -0.12
CCDC18-204ENST00000421014 SLAIN1Q8ND83 568 aa14.28□□□□□ -0.12
CCDC18-204ENST00000421014 FBXO3Q9UK99 471 aa14.23□□□□□ -0.13
CCDC18-204ENST00000421014 PCDHB8Q9UN66 801 aa14.23□□□□□ -0.13
CCDC18-204ENST00000421014 IRX5P78411 483 aaPredicted RBP14.22□□□□□ -0.13
CCDC18-204ENST00000421014 KLHL34Q8N239 644 aa14.17□□□□□ -0.14
CCDC18-204ENST00000421014 CDAN1Q8IWY9 1227 aa14.16□□□□□ -0.14
CCDC18-204ENST00000421014 OCEL1Q9H607 264 aa14.16□□□□□ -0.14
CCDC18-204ENST00000421014 ST18O60284 1047 aa14.15□□□□□ -0.14
CCDC18-204ENST00000421014 VASPP50552 380 aaPredicted RBP14.08□□□□□ -0.16
CCDC18-204ENST00000421014 GSE1Q14687 1217 aa14.07□□□□□ -0.16
CCDC18-204ENST00000421014 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.07□□□□□ -0.16
CCDC18-204ENST00000421014 ZNF467Q7Z7K2 595 aaPredicted RBP14.03□□□□□ -0.16
CCDC18-204ENST00000421014 GOLGA2Q08379 1002 aa14.02□□□□□ -0.17
CCDC18-204ENST00000421014 MKRN3Q13064 507 aaKnown RBP14□□□□□ -0.17
CCDC18-204ENST00000421014 SNPHO15079 494 aa13.98□□□□□ -0.17
CCDC18-204ENST00000421014 PDCD7Q8N8D1 485 aaKnown RBP13.97□□□□□ -0.17
CCDC18-204ENST00000421014 PSEN1P49768 467 aa13.95□□□□□ -0.18
CCDC18-204ENST00000421014 CHRM1P11229 460 aaPredicted RBP13.94□□□□□ -0.18
CCDC18-204ENST00000421014 C3orf67Q6ZVT6 689 aa13.94□□□□□ -0.18
CCDC18-204ENST00000421014 MARVELD3Q96A59 401 aa13.94□□□□□ -0.18
CCDC18-204ENST00000421014 TMEM121BQ9BXQ6 578 aaPredicted RBP13.93□□□□□ -0.18
CCDC18-204ENST00000421014 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.93□□□□□ -0.18
CCDC18-204ENST00000421014 L3MBTL3Q96JM7 780 aaPredicted RBP13.91□□□□□ -0.18
CCDC18-204ENST00000421014 CIZ1Q9ULV3 898 aaPredicted RBP13.87□□□□□ -0.19
CCDC18-204ENST00000421014 PDAP1Q13442 181 aaKnown RBP13.84□□□□□ -0.19
CCDC18-204ENST00000421014 IFNLR1Q8IU57 520 aaPredicted RBP13.82□□□□□ -0.2
CCDC18-204ENST00000421014 SPOCK2Q92563 424 aa13.82□□□□□ -0.2
CCDC18-204ENST00000421014 DPY19L2Q6NUT2 758 aa13.81□□□□□ -0.2
CCDC18-204ENST00000421014 CABP2Q9NPB3 220 aa13.81□□□□□ -0.2
CCDC18-204ENST00000421014 SPNS2Q8IVW8 549 aa13.8□□□□□ -0.2
CCDC18-204ENST00000421014 EMP3P54852 163 aa13.79□□□□□ -0.2
CCDC18-204ENST00000421014 MMRN1Q13201 1228 aa13.79□□□□□ -0.2
CCDC18-204ENST00000421014 G3V3G9 751 aa13.74□□□□□ -0.21
CCDC18-204ENST00000421014 ILDR1Q86SU0 546 aaPredicted RBP13.74□□□□□ -0.21
CCDC18-204ENST00000421014 FAM205CA6NFA0 338 aa13.72□□□□□ -0.21
CCDC18-204ENST00000421014 BOLA1Q9Y3E2 137 aa13.7□□□□□ -0.22
CCDC18-204ENST00000421014 POTEB3A0JP26 581 aa13.69□□□□□ -0.22
CCDC18-204ENST00000421014 POTEBQ6S5H4 581 aa13.69□□□□□ -0.22
CCDC18-204ENST00000421014 HS3ST6Q96QI5 342 aa13.69□□□□□ -0.22
CCDC18-204ENST00000421014 KRTAP3-3Q9BYR6 98 aa13.62□□□□□ -0.23
CCDC18-204ENST00000421014 KRTAP3-2Q9BYR7 98 aa13.62□□□□□ -0.23
CCDC18-204ENST00000421014 EFCAB3Q8N7B9 438 aa13.61□□□□□ -0.23
CCDC18-204ENST00000421014 HOXB3P14651 431 aaPredicted RBP13.6□□□□□ -0.23
CCDC18-204ENST00000421014 ZNF710Q8N1W2 664 aa13.58□□□□□ -0.24
CCDC18-204ENST00000421014 TRIM41Q8WV44 630 aa13.54□□□□□ -0.24
CCDC18-204ENST00000421014 HOXB1P14653 301 aaPredicted RBP13.52□□□□□ -0.25
CCDC18-204ENST00000421014 DOK7Q18PE1 504 aa13.52□□□□□ -0.25
CCDC18-204ENST00000421014 ERBB3P21860 1342 aa13.5□□□□□ -0.25
CCDC18-204ENST00000421014 MICALL2Q8IY33 904 aa13.45□□□□□ -0.26
CCDC18-204ENST00000421014 RIMBP2O15034 1052 aa13.44□□□□□ -0.26
CCDC18-204ENST00000421014 RIOK3O14730 519 aaKnown RBP13.43□□□□□ -0.26
CCDC18-204ENST00000421014 TMEM92Q6UXU6 159 aa13.43□□□□□ -0.26
CCDC18-204ENST00000421014 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.42□□□□□ -0.26
CCDC18-204ENST00000421014 ZFP91Q96JP5 570 aaPredicted RBP13.42□□□□□ -0.26
CCDC18-204ENST00000421014 SOX12O15370 315 aa13.41□□□□□ -0.26
CCDC18-204ENST00000421014 VARS2Q5ST30 1063 aaKnown RBP13.41□□□□□ -0.26
CCDC18-204ENST00000421014 RNF25Q96BH1 459 aaPredicted RBP13.41□□□□□ -0.26
CCDC18-204ENST00000421014 PHF8Q9UPP1 1060 aa13.4□□□□□ -0.26
CCDC18-204ENST00000421014 MS4A4AQ96JQ5 239 aa13.39□□□□□ -0.27
CCDC18-204ENST00000421014 VGFO15240 615 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms