RNA–Protein interactions for RNA: ENST00000413632.6

LMNTD1-202, Transcript of lamin tail domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LMNTD1, Length 1,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNTD1-202ENST00000413632 PHF12Q96QT6 1004 aa12.33□□□□□ -0.44
LMNTD1-202ENST00000413632 NUBP1P53384 320 aa12.32□□□□□ -0.44
LMNTD1-202ENST00000413632 PLSCR2Q9NRY7 297 aa12.3□□□□□ -0.44
LMNTD1-202ENST00000413632 FAM212AQ96EL1 285 aa12.28□□□□□ -0.44
LMNTD1-202ENST00000413632 CCDC61Q9Y6R9 512 aa12.28□□□□□ -0.44
LMNTD1-202ENST00000413632 IFNLR1Q8IU57 520 aaPredicted RBP12.25□□□□□ -0.45
LMNTD1-202ENST00000413632 GALR2O43603 387 aaPredicted RBP12.23□□□□□ -0.45
LMNTD1-202ENST00000413632 DCAF8Q5TAQ9 597 aa12.21□□□□□ -0.45
LMNTD1-202ENST00000413632 DCBLD2Q96PD2 775 aa12.2□□□□□ -0.46
LMNTD1-202ENST00000413632 SPOCK2Q92563 424 aa12.19□□□□□ -0.46
LMNTD1-202ENST00000413632 KIF12Q96FN5 646 aa12.19□□□□□ -0.46
LMNTD1-202ENST00000413632 MS4A3Q96HJ5 214 aa12.18□□□□□ -0.46
LMNTD1-202ENST00000413632 GSE1Q14687 1217 aa12.15□□□□□ -0.46
LMNTD1-202ENST00000413632 MAP3K13O43283 966 aa12.14□□□□□ -0.47
LMNTD1-202ENST00000413632 POTEIP0CG38 1075 aa12.11□□□□□ -0.47
LMNTD1-202ENST00000413632 PCDHB13Q9Y5F0 798 aa12.1□□□□□ -0.47
LMNTD1-202ENST00000413632 SLC24A1O60721 1099 aa12.09□□□□□ -0.47
LMNTD1-202ENST00000413632 PYGBP11216 843 aa12.08□□□□□ -0.48
LMNTD1-202ENST00000413632 SGIP1Q9BQI5 828 aa12.08□□□□□ -0.48
LMNTD1-202ENST00000413632 CIZ1Q9ULV3 898 aaPredicted RBP12.07□□□□□ -0.48
LMNTD1-202ENST00000413632 LHX8Q68G74 356 aa12.02□□□□□ -0.48
LMNTD1-202ENST00000413632 IFNL1Q8IU54 200 aa12.01□□□□□ -0.49
LMNTD1-202ENST00000413632 ASTLQ6HA08 431 aaPredicted RBP12.01□□□□□ -0.49
LMNTD1-202ENST00000413632 TRPC6Q9Y210 931 aa12.01□□□□□ -0.49
LMNTD1-202ENST00000413632 ATMINO43313 823 aaPredicted RBP11.99□□□□□ -0.49
LMNTD1-202ENST00000413632 TIE1P35590 1138 aa11.99□□□□□ -0.49
LMNTD1-202ENST00000413632 BMP2KQ9NSY1 1161 aaPredicted RBP11.98□□□□□ -0.49
LMNTD1-202ENST00000413632 CHRM1P11229 460 aaPredicted RBP11.97□□□□□ -0.49
LMNTD1-202ENST00000413632 ATN1P54259 1190 aaPredicted RBP11.94□□□□□ -0.5
LMNTD1-202ENST00000413632 ZNF467Q7Z7K2 595 aaPredicted RBP11.94□□□□□ -0.5
LMNTD1-202ENST00000413632 PELP1Q8IZL8 1130 aaKnown RBP11.94□□□□□ -0.5
LMNTD1-202ENST00000413632 PCDHB8Q9UN66 801 aa11.94□□□□□ -0.5
LMNTD1-202ENST00000413632 TRIM41Q8WV44 630 aa11.93□□□□□ -0.5
LMNTD1-202ENST00000413632 TTLL13PA6NNM8 815 aa11.92□□□□□ -0.5
LMNTD1-202ENST00000413632 SLC39A7Q92504 469 aa11.91□□□□□ -0.5
LMNTD1-202ENST00000413632 TMEM106CQ9BVX2 250 aa11.9□□□□□ -0.5
LMNTD1-202ENST00000413632 C7P10643 843 aa11.88□□□□□ -0.51
LMNTD1-202ENST00000413632 METRNQ9UJH8 293 aa11.87□□□□□ -0.51
LMNTD1-202ENST00000413632 TRIM35Q9UPQ4 493 aa11.86□□□□□ -0.51
LMNTD1-202ENST00000413632 PSEN1P49768 467 aa11.81□□□□□ -0.52
LMNTD1-202ENST00000413632 PDAP1Q13442 181 aaKnown RBP11.81□□□□□ -0.52
LMNTD1-202ENST00000413632 IER5LQ5T953 404 aa11.78□□□□□ -0.52
LMNTD1-202ENST00000413632 SEC24BO95487 1268 aa11.76□□□□□ -0.53
LMNTD1-202ENST00000413632 ECM2O94769 699 aaPredicted RBP11.76□□□□□ -0.53
LMNTD1-202ENST00000413632 RIOK3O14730 519 aaKnown RBP11.75□□□□□ -0.53
LMNTD1-202ENST00000413632 GOLGA2Q08379 1002 aa11.75□□□□□ -0.53
LMNTD1-202ENST00000413632 POTEB2H3BUK9 544 aa11.73□□□□□ -0.53
LMNTD1-202ENST00000413632 RNF25Q96BH1 459 aaPredicted RBP11.72□□□□□ -0.53
LMNTD1-202ENST00000413632 PKD2Q13563 968 aa11.71□□□□□ -0.53
LMNTD1-202ENST00000413632 POTEFA5A3E0 1075 aa11.7□□□□□ -0.54
LMNTD1-202ENST00000413632 COLQQ9Y215 455 aaPredicted RBP11.7□□□□□ -0.54
LMNTD1-202ENST00000413632 PLCG2P16885 1265 aa11.7□□□□□ -0.54
LMNTD1-202ENST00000413632 MKRN3Q13064 507 aaKnown RBP11.7□□□□□ -0.54
LMNTD1-202ENST00000413632 VGFO15240 615 aaPredicted RBP11.68□□□□□ -0.54
LMNTD1-202ENST00000413632 IRX5P78411 483 aaPredicted RBP11.66□□□□□ -0.54
LMNTD1-202ENST00000413632 CABP2Q9NPB3 220 aa11.66□□□□□ -0.54
LMNTD1-202ENST00000413632 TAOK2Q9UL54 1235 aa11.66□□□□□ -0.54
LMNTD1-202ENST00000413632 OCEL1Q9H607 264 aa11.65□□□□□ -0.55
LMNTD1-202ENST00000413632 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.63□□□□□ -0.55
LMNTD1-202ENST00000413632 MAMSTRQ6ZN01 415 aa11.63□□□□□ -0.55
LMNTD1-202ENST00000413632 ZFP91Q96JP5 570 aaPredicted RBP11.63□□□□□ -0.55
LMNTD1-202ENST00000413632 POTEJP0CG39 1038 aa11.62□□□□□ -0.55
LMNTD1-202ENST00000413632 OTUD5Q96G74 571 aa11.62□□□□□ -0.55
LMNTD1-202ENST00000413632 RGL2O15211 777 aa11.61□□□□□ -0.55
LMNTD1-202ENST00000413632 SCUBE2Q9NQ36 999 aa11.6□□□□□ -0.55
LMNTD1-202ENST00000413632 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.6□□□□□ -0.55
LMNTD1-202ENST00000413632 PDCD7Q8N8D1 485 aaKnown RBP11.56□□□□□ -0.56
LMNTD1-202ENST00000413632 EFCAB3Q8N7B9 438 aa11.55□□□□□ -0.56
LMNTD1-202ENST00000413632 BCL11BQ9C0K0 894 aaPredicted RBP11.55□□□□□ -0.56
LMNTD1-202ENST00000413632 STK25O00506 426 aa11.54□□□□□ -0.56
LMNTD1-202ENST00000413632 STK24Q9Y6E0 443 aa11.53□□□□□ -0.56
LMNTD1-202ENST00000413632 ILDR1Q86SU0 546 aaPredicted RBP11.5□□□□□ -0.57
LMNTD1-202ENST00000413632 L3MBTL3Q96JM7 780 aaPredicted RBP11.5□□□□□ -0.57
LMNTD1-202ENST00000413632 SOX12O15370 315 aa11.49□□□□□ -0.57
LMNTD1-202ENST00000413632 DPY19L2Q6NUT2 758 aa11.45□□□□□ -0.58
LMNTD1-202ENST00000413632 G3V3G9 751 aa11.45□□□□□ -0.58
LMNTD1-202ENST00000413632 C3orf67Q6ZVT6 689 aa11.43□□□□□ -0.58
LMNTD1-202ENST00000413632 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.43□□□□□ -0.58
LMNTD1-202ENST00000413632 PHF8Q9UPP1 1060 aa11.43□□□□□ -0.58
LMNTD1-202ENST00000413632 SLAIN1Q8ND83 568 aa11.42□□□□□ -0.58
LMNTD1-202ENST00000413632 BOLA1Q9Y3E2 137 aa11.41□□□□□ -0.58
LMNTD1-202ENST00000413632 NLRP6P59044 892 aa11.4□□□□□ -0.58
LMNTD1-202ENST00000413632 PLCB2Q00722 1185 aa11.4□□□□□ -0.59
LMNTD1-202ENST00000413632 POTEMA6NI47 508 aa11.39□□□□□ -0.59
LMNTD1-202ENST00000413632 CHGAP10645 457 aaKnown RBP11.38□□□□□ -0.59
LMNTD1-202ENST00000413632 HS6ST3Q8IZP7 471 aa11.38□□□□□ -0.59
LMNTD1-202ENST00000413632 MS4A4AQ96JQ5 239 aa11.37□□□□□ -0.59
LMNTD1-202ENST00000413632 MFRPQ9BY79 579 aa11.36□□□□□ -0.59
LMNTD1-202ENST00000413632 DCAF8L2P0C7V8 631 aa11.35□□□□□ -0.59
LMNTD1-202ENST00000413632 FBXO22Q8NEZ5 403 aa11.35□□□□□ -0.59
LMNTD1-202ENST00000413632 TMEM121BQ9BXQ6 578 aaPredicted RBP11.32□□□□□ -0.6
LMNTD1-202ENST00000413632 POTEGQ6S5H5 508 aa11.31□□□□□ -0.6
LMNTD1-202ENST00000413632 MICALL2Q8IY33 904 aa11.31□□□□□ -0.6
LMNTD1-202ENST00000413632 PCDH10Q9P2E7 1040 aa11.31□□□□□ -0.6
LMNTD1-202ENST00000413632 FAM163AQ96GL9 167 aaPredicted RBP11.29□□□□□ -0.6
LMNTD1-202ENST00000413632 SNPHO15079 494 aa11.25□□□□□ -0.61
LMNTD1-202ENST00000413632 DNAJC5Q9H3Z4 198 aa11.24□□□□□ -0.61
LMNTD1-202ENST00000413632 NKX1-1Q15270 411 aaPredicted RBP11.19□□□□□ -0.62
LMNTD1-202ENST00000413632 HAP1P54257 671 aaPredicted RBP11.19□□□□□ -0.62
LMNTD1-202ENST00000413632 LCE2DQ5TA82 110 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms