RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 BAZ1AQ9NRL2 1556 aaPredicted RBP18.8■□□□□ 0.6
CLTCL1-201ENST00000412649 PABPN1Q86U42 306 aaKnown RBP eCLIP18.8■□□□□ 0.6
CLTCL1-201ENST00000412649 WIZO95785 1651 aa18.79■□□□□ 0.6
CLTCL1-201ENST00000412649 TIMELESSQ9UNS1 1208 aa18.78■□□□□ 0.6
CLTCL1-201ENST00000412649 P3H3Q8IVL6 736 aa18.77■□□□□ 0.6
CLTCL1-201ENST00000412649 KANK4Q5T7N3 995 aaPredicted RBP18.73■□□□□ 0.59
CLTCL1-201ENST00000412649 EIF4G2P78344 907 aaKnown RBP eCLIP18.71■□□□□ 0.59
CLTCL1-201ENST00000412649 GLIPR1L2Q4G1C9 344 aa18.71■□□□□ 0.59
CLTCL1-201ENST00000412649 NEFMP07197 916 aa18.7■□□□□ 0.58
CLTCL1-201ENST00000412649 RUSC2Q8N2Y8 1516 aa18.7■□□□□ 0.58
CLTCL1-201ENST00000412649 RAB3GAP2Q9H2M9 1393 aa18.7■□□□□ 0.58
CLTCL1-201ENST00000412649 ZNF326Q5BKZ1 582 aaKnown RBP18.69■□□□□ 0.58
CLTCL1-201ENST00000412649 PPM1GO15355 546 aaPredicted RBP18.69■□□□□ 0.58
CLTCL1-201ENST00000412649 PRKCSHP14314 528 aaPredicted RBP18.67■□□□□ 0.58
CLTCL1-201ENST00000412649 SETD5Q9C0A6 1442 aa18.67■□□□□ 0.58
CLTCL1-201ENST00000412649 LAS1LQ9Y4W2 734 aaKnown RBP18.67■□□□□ 0.58
CLTCL1-201ENST00000412649 NACADO15069 1562 aa18.67■□□□□ 0.58
CLTCL1-201ENST00000412649 DDRGK1Q96HY6 314 aa18.62■□□□□ 0.57
CLTCL1-201ENST00000412649 TMC1Q8TDI8 760 aa18.61■□□□□ 0.57
CLTCL1-201ENST00000412649 IPO9Q96P70 1041 aaKnown RBP18.61■□□□□ 0.57
CLTCL1-201ENST00000412649 PPP1R15AO75807 674 aaPredicted RBP18.6■□□□□ 0.57
CLTCL1-201ENST00000412649 MSH5O43196 834 aa18.59■□□□□ 0.57
CLTCL1-201ENST00000412649 TOP2AP11388 1531 aaKnown RBP18.58■□□□□ 0.57
CLTCL1-201ENST00000412649 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.58■□□□□ 0.56
CLTCL1-201ENST00000412649 BAZ1BQ9UIG0 1483 aaKnown RBP18.57■□□□□ 0.56
CLTCL1-201ENST00000412649 RAPGEF2Q9Y4G8 1499 aa18.54■□□□□ 0.56
CLTCL1-201ENST00000412649 SALL2Q9Y467 1007 aaPredicted RBP18.54■□□□□ 0.56
CLTCL1-201ENST00000412649 ANO8Q9HCE9 1232 aaPredicted RBP18.48■□□□□ 0.55
CLTCL1-201ENST00000412649 CHIC2Q9UKJ5 165 aa18.48■□□□□ 0.55
CLTCL1-201ENST00000412649 KIF27Q86VH2 1401 aa18.48■□□□□ 0.55
CLTCL1-201ENST00000412649 SENP3-EIF4A1A0A087X0R7 540 aa18.47■□□□□ 0.55
CLTCL1-201ENST00000412649 MTUS2Q5JR59 1369 aa18.47■□□□□ 0.55
CLTCL1-201ENST00000412649 HSPA5P11021 654 aaKnown RBP18.46■□□□□ 0.55
CLTCL1-201ENST00000412649 USP35Q9P2H5 1018 aa18.42■□□□□ 0.54
CLTCL1-201ENST00000412649 RRP7BPQ9NSQ0 103 aa18.41■□□□□ 0.54
CLTCL1-201ENST00000412649 KIF21BO75037 1637 aa18.41■□□□□ 0.54
CLTCL1-201ENST00000412649 TCERG1O14776 1098 aaKnown RBP18.38■□□□□ 0.53
CLTCL1-201ENST00000412649 ARXQ96QS3 562 aa18.38■□□□□ 0.53
CLTCL1-201ENST00000412649 CANXP27824 592 aaKnown RBP18.36■□□□□ 0.53
CLTCL1-201ENST00000412649 ZBED9Q6R2W3 1325 aa18.35■□□□□ 0.53
CLTCL1-201ENST00000412649 NUDCQ9Y266 331 aa18.35■□□□□ 0.53
CLTCL1-201ENST00000412649 FHAD1B1AJZ9 1412 aa18.35■□□□□ 0.53
CLTCL1-201ENST00000412649 SMARCA2P51531 1590 aa18.34■□□□□ 0.53
CLTCL1-201ENST00000412649 PAK3O75914 559 aaPredicted RBP18.34■□□□□ 0.53
CLTCL1-201ENST00000412649 UPF2Q9HAU5 1272 aaKnown RBP18.34■□□□□ 0.53
CLTCL1-201ENST00000412649 RRBP1Q9P2E9 1410 aaKnown RBP18.33■□□□□ 0.53
CLTCL1-201ENST00000412649 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.32■□□□□ 0.52
CLTCL1-201ENST00000412649 ARHGAP35Q9NRY4 1499 aa18.3■□□□□ 0.52
CLTCL1-201ENST00000412649 IL27Q8NEV9 243 aa18.3■□□□□ 0.52
CLTCL1-201ENST00000412649 BECN1Q14457 450 aa18.28■□□□□ 0.52
CLTCL1-201ENST00000412649 ARID3CA6NKF2 412 aa18.27■□□□□ 0.52
CLTCL1-201ENST00000412649 PRKRIP1Q9H875 184 aaPredicted RBP18.27■□□□□ 0.52
CLTCL1-201ENST00000412649 NAP1L5Q96NT1 182 aaPredicted RBP18.26■□□□□ 0.51
CLTCL1-201ENST00000412649 SLC4A1APQ9BWU0 796 aaKnown RBP18.26■□□□□ 0.51
CLTCL1-201ENST00000412649 SMARCA4P51532 1647 aa18.25■□□□□ 0.51
CLTCL1-201ENST00000412649 GSE1Q14687 1217 aa18.25■□□□□ 0.51
CLTCL1-201ENST00000412649 WDR97A6NE52 1622 aa18.24■□□□□ 0.51
CLTCL1-201ENST00000412649 PDE4AP27815 886 aa18.22■□□□□ 0.51
CLTCL1-201ENST00000412649 ANP32BQ92688 251 aaKnown RBP18.22■□□□□ 0.51
CLTCL1-201ENST00000412649 RSPH6AQ9H0K4 717 aa18.21■□□□□ 0.5
CLTCL1-201ENST00000412649 RCAN3Q9UKA8 241 aa18.2■□□□□ 0.5
CLTCL1-201ENST00000412649 RGS3P49796 1198 aa18.17■□□□□ 0.5
CLTCL1-201ENST00000412649 L1TD1Q5T7N2 865 aaKnown RBP18.17■□□□□ 0.5
CLTCL1-201ENST00000412649 WDR43Q15061 677 aaKnown RBP eCLIP18.15■□□□□ 0.5
CLTCL1-201ENST00000412649 CARMIL1Q5VZK9 1371 aa18.15■□□□□ 0.5
CLTCL1-201ENST00000412649 KDM2AQ9Y2K7 1162 aa18.15■□□□□ 0.5
CLTCL1-201ENST00000412649 FMN1Q68DA7 1419 aa18.14■□□□□ 0.5
CLTCL1-201ENST00000412649 TRIM44Q96DX7 344 aaPredicted RBP18.14■□□□□ 0.49
CLTCL1-201ENST00000412649 ARAP1Q96P48 1450 aa18.13■□□□□ 0.49
CLTCL1-201ENST00000412649 ZNF777Q9ULD5 760 aaPredicted RBP18.13■□□□□ 0.49
CLTCL1-201ENST00000412649 L3MBTL2Q969R5 705 aa18.12■□□□□ 0.49
CLTCL1-201ENST00000412649 MS4A1P11836 297 aa18.12■□□□□ 0.49
CLTCL1-201ENST00000412649 WASHC2AQ641Q2 1341 aa18.12■□□□□ 0.49
CLTCL1-201ENST00000412649 CNTLNQ9NXG0 1405 aa18.12■□□□□ 0.49
CLTCL1-201ENST00000412649 CCDC18Q5T9S5 1454 aa18.11■□□□□ 0.49
CLTCL1-201ENST00000412649 CUX2O14529 1486 aa18.11■□□□□ 0.49
CLTCL1-201ENST00000412649 HSP90AA1P07900 732 aaKnown RBP18.1■□□□□ 0.49
CLTCL1-201ENST00000412649 CARD11Q9BXL7 1154 aa18.1■□□□□ 0.49
CLTCL1-201ENST00000412649 EXOC6Q8TAG9 804 aa18.1■□□□□ 0.49
CLTCL1-201ENST00000412649 SYNJ1O43426 1573 aa18.09■□□□□ 0.49
CLTCL1-201ENST00000412649 BRPF3Q9ULD4 1205 aa18.09■□□□□ 0.49
CLTCL1-201ENST00000412649 PHLDB1Q86UU1 1377 aa18.09■□□□□ 0.49
CLTCL1-201ENST00000412649 RRP1P56182 461 aaKnown RBP18.08■□□□□ 0.48
CLTCL1-201ENST00000412649 PNNQ9H307 717 aaKnown RBP18.07■□□□□ 0.48
CLTCL1-201ENST00000412649 FOXD1Q16676 465 aa18.07■□□□□ 0.48
CLTCL1-201ENST00000412649 MPHOSPH9Q99550 1183 aa18.07■□□□□ 0.48
CLTCL1-201ENST00000412649 SLC4A3P48751 1232 aa18.06■□□□□ 0.48
CLTCL1-201ENST00000412649 ERICH3Q5RHP9 1530 aa18.06■□□□□ 0.48
CLTCL1-201ENST00000412649 CCDC7Q96M83 1385 aa18.04■□□□□ 0.48
CLTCL1-201ENST00000412649 NFKBIBQ15653 356 aa18.04■□□□□ 0.48
CLTCL1-201ENST00000412649 LRRC9Q6ZRR7 1453 aa18.03■□□□□ 0.48
CLTCL1-201ENST00000412649 AKNAQ7Z591 1439 aa18.02■□□□□ 0.48
CLTCL1-201ENST00000412649 UACAQ9BZF9 1416 aa18.02■□□□□ 0.48
CLTCL1-201ENST00000412649 PDE3BQ13370 1112 aa18.02■□□□□ 0.48
CLTCL1-201ENST00000412649 CCDC184Q52MB2 194 aa18.02■□□□□ 0.48
CLTCL1-201ENST00000412649 RALBP1Q15311 655 aa18■□□□□ 0.47
CLTCL1-201ENST00000412649 FRAT1Q92837 279 aaPredicted RBP17.99■□□□□ 0.47
CLTCL1-201ENST00000412649 EIF4G1Q04637 1599 aaKnown RBP17.98■□□□□ 0.47
CLTCL1-201ENST00000412649 SMG6Q86US8 1419 aaKnown RBP17.97■□□□□ 0.47
CLTCL1-201ENST00000412649 VSIG10Q8N0Z9 540 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms