RNA–Protein interactions for RNA: ENST00000411383.1

RN7SKP279-201, Transcript of RNA, 7SK small nuclear pseudogene 279, humanhuman

BASIC

Gene RN7SKP279, Length 298 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP279-201ENST00000411383 METRNQ9UJH8 293 aa11.44□□□□□ -0.58
RN7SKP279-201ENST00000411383 DCAF8L2P0C7V8 631 aa11.42□□□□□ -0.58
RN7SKP279-201ENST00000411383 FAM163AQ96GL9 167 aaPredicted RBP11.42□□□□□ -0.58
RN7SKP279-201ENST00000411383 NACADO15069 1562 aa11.41□□□□□ -0.58
RN7SKP279-201ENST00000411383 LCE2DQ5TA82 110 aaPredicted RBP11.4□□□□□ -0.58
RN7SKP279-201ENST00000411383 SLC39A7Q92504 469 aa11.39□□□□□ -0.59
RN7SKP279-201ENST00000411383 C7P10643 843 aa11.38□□□□□ -0.59
RN7SKP279-201ENST00000411383 POTEJP0CG39 1038 aa11.37□□□□□ -0.59
RN7SKP279-201ENST00000411383 ASTLQ6HA08 431 aaPredicted RBP11.35□□□□□ -0.59
RN7SKP279-201ENST00000411383 TRIM41Q8WV44 630 aa11.35□□□□□ -0.59
RN7SKP279-201ENST00000411383 SCUBE2Q9NQ36 999 aa11.35□□□□□ -0.59
RN7SKP279-201ENST00000411383 STAG3Q9UJ98 1225 aa11.33□□□□□ -0.6
RN7SKP279-201ENST00000411383 CC2D2AQ9P2K1 1620 aa11.31□□□□□ -0.6
RN7SKP279-201ENST00000411383 ATMINO43313 823 aaPredicted RBP11.3□□□□□ -0.6
RN7SKP279-201ENST00000411383 BICRAQ9NZM4 1560 aa11.29□□□□□ -0.6
RN7SKP279-201ENST00000411383 NPM1P06748 294 aaKnown RBP eCLIP11.27□□□□□ -0.61
RN7SKP279-201ENST00000411383 MS4A3Q96HJ5 214 aa11.27□□□□□ -0.61
RN7SKP279-201ENST00000411383 CDAN1Q8IWY9 1227 aa11.23□□□□□ -0.61
RN7SKP279-201ENST00000411383 CUX2O14529 1486 aa11.2□□□□□ -0.62
RN7SKP279-201ENST00000411383 UNC13AQ9UPW8 1703 aa11.17□□□□□ -0.62
RN7SKP279-201ENST00000411383 ATN1P54259 1190 aaPredicted RBP11.14□□□□□ -0.63
RN7SKP279-201ENST00000411383 SHROOM4Q9ULL8 1493 aa11.12□□□□□ -0.63
RN7SKP279-201ENST00000411383 EIF4G1Q04637 1599 aaKnown RBP11.12□□□□□ -0.63
RN7SKP279-201ENST00000411383 MNX1P50219 401 aaPredicted RBP11.11□□□□□ -0.63
RN7SKP279-201ENST00000411383 POTEFA5A3E0 1075 aa11.07□□□□□ -0.64
RN7SKP279-201ENST00000411383 ERCC6Q03468 1493 aa11.02□□□□□ -0.65
RN7SKP279-201ENST00000411383 MMRN1Q13201 1228 aa11.02□□□□□ -0.65
RN7SKP279-201ENST00000411383 TSPYL2Q9H2G4 693 aaPredicted RBP11.02□□□□□ -0.65
RN7SKP279-201ENST00000411383 BMP2KQ9NSY1 1161 aaPredicted RBP11.02□□□□□ -0.65
RN7SKP279-201ENST00000411383 SEC24BO95487 1268 aa11□□□□□ -0.65
RN7SKP279-201ENST00000411383 MYO15BQ96JP2 1530 aa10.99□□□□□ -0.65
RN7SKP279-201ENST00000411383 ST18O60284 1047 aa10.97□□□□□ -0.65
RN7SKP279-201ENST00000411383 SPNS2Q8IVW8 549 aa10.97□□□□□ -0.65
RN7SKP279-201ENST00000411383 CCDC61Q9Y6R9 512 aa10.97□□□□□ -0.65
RN7SKP279-201ENST00000411383 KIF12Q96FN5 646 aa10.96□□□□□ -0.65
RN7SKP279-201ENST00000411383 SPDYE4A6NLX3 237 aa10.95□□□□□ -0.66
RN7SKP279-201ENST00000411383 TIE1P35590 1138 aa10.95□□□□□ -0.66
RN7SKP279-201ENST00000411383 COLQQ9Y215 455 aaPredicted RBP10.95□□□□□ -0.66
RN7SKP279-201ENST00000411383 TRPC6Q9Y210 931 aa10.93□□□□□ -0.66
RN7SKP279-201ENST00000411383 ZCCHC6Q5VYS8 1495 aaKnown RBP10.93□□□□□ -0.66
RN7SKP279-201ENST00000411383 SLAIN1Q8ND83 568 aa10.92□□□□□ -0.66
RN7SKP279-201ENST00000411383 DCAF1Q9Y4B6 1507 aa10.87□□□□□ -0.67
RN7SKP279-201ENST00000411383 TTLL13PA6NNM8 815 aa10.86□□□□□ -0.67
RN7SKP279-201ENST00000411383 MAP3K13O43283 966 aa10.86□□□□□ -0.67
RN7SKP279-201ENST00000411383 IER5LQ5T953 404 aa10.86□□□□□ -0.67
RN7SKP279-201ENST00000411383 TMEM121BQ9BXQ6 578 aaPredicted RBP10.83□□□□□ -0.68
RN7SKP279-201ENST00000411383 SCRIBQ14160 1630 aa10.83□□□□□ -0.68
RN7SKP279-201ENST00000411383 TRIM35Q9UPQ4 493 aa10.81□□□□□ -0.68
RN7SKP279-201ENST00000411383 SNPHO15079 494 aa10.74□□□□□ -0.69
RN7SKP279-201ENST00000411383 PLCG2P16885 1265 aa10.73□□□□□ -0.69
RN7SKP279-201ENST00000411383 MARVELD3Q96A59 401 aa10.73□□□□□ -0.69
RN7SKP279-201ENST00000411383 RASEFQ8IZ41 740 aa10.68□□□□□ -0.7
RN7SKP279-201ENST00000411383 SGIP1Q9BQI5 828 aa10.68□□□□□ -0.7
RN7SKP279-201ENST00000411383 PCDHB13Q9Y5F0 798 aa10.67□□□□□ -0.7
RN7SKP279-201ENST00000411383 PLEKHG5O94827 1062 aa10.66□□□□□ -0.7
RN7SKP279-201ENST00000411383 NESP48681 1621 aa10.64□□□□□ -0.71
RN7SKP279-201ENST00000411383 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.62□□□□□ -0.71
RN7SKP279-201ENST00000411383 EMP3P54852 163 aa10.61□□□□□ -0.71
RN7SKP279-201ENST00000411383 TMEM106CQ9BVX2 250 aa10.61□□□□□ -0.71
RN7SKP279-201ENST00000411383 IRX5P78411 483 aaPredicted RBP10.6□□□□□ -0.71
RN7SKP279-201ENST00000411383 NCAPD3P42695 1498 aa10.6□□□□□ -0.71
RN7SKP279-201ENST00000411383 THOC2Q8NI27 1593 aaKnown RBP10.57□□□□□ -0.72
RN7SKP279-201ENST00000411383 IFNL1Q8IU54 200 aa10.57□□□□□ -0.72
RN7SKP279-201ENST00000411383 KRTAP3-3Q9BYR6 98 aa10.57□□□□□ -0.72
RN7SKP279-201ENST00000411383 KRTAP3-2Q9BYR7 98 aa10.57□□□□□ -0.72
RN7SKP279-201ENST00000411383 OCEL1Q9H607 264 aa10.56□□□□□ -0.72
RN7SKP279-201ENST00000411383 MIER1Q8N108 512 aa10.55□□□□□ -0.72
RN7SKP279-201ENST00000411383 ILDR1Q86SU0 546 aaPredicted RBP10.54□□□□□ -0.72
RN7SKP279-201ENST00000411383 HS3ST6Q96QI5 342 aa10.54□□□□□ -0.72
RN7SKP279-201ENST00000411383 SMARCA2P51531 1590 aa10.52□□□□□ -0.72
RN7SKP279-201ENST00000411383 FAM205CA6NFA0 338 aa10.51□□□□□ -0.73
RN7SKP279-201ENST00000411383 PROM2Q8N271 834 aa10.51□□□□□ -0.73
RN7SKP279-201ENST00000411383 CYB5RLQ6IPT4 315 aa10.5□□□□□ -0.73
RN7SKP279-201ENST00000411383 PDS5BQ9NTI5 1447 aa10.49□□□□□ -0.73
RN7SKP279-201ENST00000411383 POTEB3A0JP26 581 aa10.48□□□□□ -0.73
RN7SKP279-201ENST00000411383 POTEBQ6S5H4 581 aa10.48□□□□□ -0.73
RN7SKP279-201ENST00000411383 CSRNP3Q8WYN3 585 aa10.48□□□□□ -0.73
RN7SKP279-201ENST00000411383 BAZ1AQ9NRL2 1556 aaPredicted RBP10.47□□□□□ -0.73
RN7SKP279-201ENST00000411383 ATAD2BQ9ULI0 1458 aa10.45□□□□□ -0.74
RN7SKP279-201ENST00000411383 C3orf67Q6ZVT6 689 aa10.45□□□□□ -0.74
RN7SKP279-201ENST00000411383 RIMBP3CA6NJZ7 1639 aa10.44□□□□□ -0.74
RN7SKP279-201ENST00000411383 RIMBP3BA6NNM3 1639 aa10.44□□□□□ -0.74
RN7SKP279-201ENST00000411383 RIMBP3Q9UFD9 1639 aa10.44□□□□□ -0.74
RN7SKP279-201ENST00000411383 LAMC3Q9Y6N6 1575 aa10.4□□□□□ -0.74
RN7SKP279-201ENST00000411383 RNF166Q96A37 237 aaPredicted RBP10.4□□□□□ -0.74
RN7SKP279-201ENST00000411383 PLCD3Q8N3E9 789 aa10.39□□□□□ -0.75
RN7SKP279-201ENST00000411383 FAM212AQ96EL1 285 aa10.39□□□□□ -0.75
RN7SKP279-201ENST00000411383 ARHGEF11O15085 1522 aa10.38□□□□□ -0.75
RN7SKP279-201ENST00000411383 MRC2Q9UBG0 1479 aa10.38□□□□□ -0.75
RN7SKP279-201ENST00000411383 NUBP1P53384 320 aa10.38□□□□□ -0.75
RN7SKP279-201ENST00000411383 ZBTB47Q9UFB7 747 aaPredicted RBP10.38□□□□□ -0.75
RN7SKP279-201ENST00000411383 HMGXB3Q12766 1538 aa10.37□□□□□ -0.75
RN7SKP279-201ENST00000411383 L3MBTL3Q96JM7 780 aaPredicted RBP10.35□□□□□ -0.75
RN7SKP279-201ENST00000411383 KIF21AQ7Z4S6 1674 aa10.32□□□□□ -0.76
RN7SKP279-201ENST00000411383 WDR62O43379 1518 aa10.32□□□□□ -0.76
RN7SKP279-201ENST00000411383 PDCD7Q8N8D1 485 aaKnown RBP10.31□□□□□ -0.76
RN7SKP279-201ENST00000411383 BAZ1BQ9UIG0 1483 aaKnown RBP10.3□□□□□ -0.76
RN7SKP279-201ENST00000411383 CADPSQ9ULU8 1353 aa10.28□□□□□ -0.76
RN7SKP279-201ENST00000411383 MYT1LQ9UL68 1186 aa10.28□□□□□ -0.76
RN7SKP279-201ENST00000411383 GOLGA2Q08379 1002 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 127.5 ms