RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 TRPC6Q9Y210 931 aa6.23□□□□□ -1.41
RNU2-55P-201ENST00000411146 OTUD5Q96G74 571 aa6.22□□□□□ -1.41
RNU2-55P-201ENST00000411146 CCDC61Q9Y6R9 512 aa6.22□□□□□ -1.41
RNU2-55P-201ENST00000411146 ASTLQ6HA08 431 aaPredicted RBP6.19□□□□□ -1.42
RNU2-55P-201ENST00000411146 POTEJP0CG39 1038 aa6.18□□□□□ -1.42
RNU2-55P-201ENST00000411146 KIF12Q96FN5 646 aa6.18□□□□□ -1.42
RNU2-55P-201ENST00000411146 MAP3K13O43283 966 aa6.17□□□□□ -1.42
RNU2-55P-201ENST00000411146 ATMINO43313 823 aaPredicted RBP6.17□□□□□ -1.42
RNU2-55P-201ENST00000411146 NUBP1P53384 320 aa6.16□□□□□ -1.42
RNU2-55P-201ENST00000411146 PLCD3Q8N3E9 789 aa6.16□□□□□ -1.42
RNU2-55P-201ENST00000411146 ATN1P54259 1190 aaPredicted RBP6.15□□□□□ -1.42
RNU2-55P-201ENST00000411146 POTEFA5A3E0 1075 aa6.14□□□□□ -1.43
RNU2-55P-201ENST00000411146 METRNQ9UJH8 293 aa6.13□□□□□ -1.43
RNU2-55P-201ENST00000411146 C7P10643 843 aa6.12□□□□□ -1.43
RNU2-55P-201ENST00000411146 SLC39A7Q92504 469 aa6.12□□□□□ -1.43
RNU2-55P-201ENST00000411146 BMP2KQ9NSY1 1161 aaPredicted RBP6.12□□□□□ -1.43
RNU2-55P-201ENST00000411146 PLEKHG5O94827 1062 aa6.07□□□□□ -1.44
RNU2-55P-201ENST00000411146 TIE1P35590 1138 aa6.07□□□□□ -1.44
RNU2-55P-201ENST00000411146 IFNL1Q8IU54 200 aa6.07□□□□□ -1.44
RNU2-55P-201ENST00000411146 COLQQ9Y215 455 aaPredicted RBP6.07□□□□□ -1.44
RNU2-55P-201ENST00000411146 TTLL13PA6NNM8 815 aa6.06□□□□□ -1.44
RNU2-55P-201ENST00000411146 PCDHB13Q9Y5F0 798 aa6.05□□□□□ -1.44
RNU2-55P-201ENST00000411146 PYGBP11216 843 aa6.04□□□□□ -1.44
RNU2-55P-201ENST00000411146 LCE2DQ5TA82 110 aaPredicted RBP6.04□□□□□ -1.44
RNU2-55P-201ENST00000411146 DCAF8Q5TAQ9 597 aa6.04□□□□□ -1.44
RNU2-55P-201ENST00000411146 POTEMA6NI47 508 aa6.03□□□□□ -1.44
RNU2-55P-201ENST00000411146 SGIP1Q9BQI5 828 aa6.03□□□□□ -1.44
RNU2-55P-201ENST00000411146 MAMSTRQ6ZN01 415 aa6.02□□□□□ -1.45
RNU2-55P-201ENST00000411146 PCDHB8Q9UN66 801 aa6.02□□□□□ -1.45
RNU2-55P-201ENST00000411146 VASPP50552 380 aaPredicted RBP6.01□□□□□ -1.45
RNU2-55P-201ENST00000411146 POTEGQ6S5H5 508 aa6.01□□□□□ -1.45
RNU2-55P-201ENST00000411146 PLSCR2Q9NRY7 297 aa6.01□□□□□ -1.45
RNU2-55P-201ENST00000411146 TRIM35Q9UPQ4 493 aa6.01□□□□□ -1.45
RNU2-55P-201ENST00000411146 ZBTB47Q9UFB7 747 aaPredicted RBP6□□□□□ -1.45
RNU2-55P-201ENST00000411146 IFNLR1Q8IU57 520 aaPredicted RBP5.99□□□□□ -1.45
RNU2-55P-201ENST00000411146 FAM212AQ96EL1 285 aa5.99□□□□□ -1.45
RNU2-55P-201ENST00000411146 TMEM106CQ9BVX2 250 aa5.99□□□□□ -1.45
RNU2-55P-201ENST00000411146 SCUBE2Q9NQ36 999 aa5.99□□□□□ -1.45
RNU2-55P-201ENST00000411146 KLHL34Q8N239 644 aa5.98□□□□□ -1.45
RNU2-55P-201ENST00000411146 FBXO3Q9UK99 471 aa5.98□□□□□ -1.45
RNU2-55P-201ENST00000411146 IER5LQ5T953 404 aa5.96□□□□□ -1.46
RNU2-55P-201ENST00000411146 SEC24BO95487 1268 aa5.95□□□□□ -1.46
RNU2-55P-201ENST00000411146 FAM163AQ96GL9 167 aaPredicted RBP5.95□□□□□ -1.46
RNU2-55P-201ENST00000411146 IRX5P78411 483 aaPredicted RBP5.93□□□□□ -1.46
RNU2-55P-201ENST00000411146 PCDH10Q9P2E7 1040 aa5.92□□□□□ -1.46
RNU2-55P-201ENST00000411146 CIZ1Q9ULV3 898 aaPredicted RBP5.88□□□□□ -1.47
RNU2-55P-201ENST00000411146 CHRM1P11229 460 aaPredicted RBP5.87□□□□□ -1.47
RNU2-55P-201ENST00000411146 PLCG2P16885 1265 aa5.87□□□□□ -1.47
RNU2-55P-201ENST00000411146 GSE1Q14687 1217 aa5.87□□□□□ -1.47
RNU2-55P-201ENST00000411146 DPY19L2Q6NUT2 758 aa5.87□□□□□ -1.47
RNU2-55P-201ENST00000411146 SLAIN1Q8ND83 568 aa5.87□□□□□ -1.47
RNU2-55P-201ENST00000411146 SPOCK2Q92563 424 aa5.87□□□□□ -1.47
RNU2-55P-201ENST00000411146 OCEL1Q9H607 264 aa5.87□□□□□ -1.47
RNU2-55P-201ENST00000411146 PSEN1P49768 467 aa5.86□□□□□ -1.47
RNU2-55P-201ENST00000411146 PDCD7Q8N8D1 485 aaKnown RBP5.86□□□□□ -1.47
RNU2-55P-201ENST00000411146 ST18O60284 1047 aa5.85□□□□□ -1.47
RNU2-55P-201ENST00000411146 ZNF467Q7Z7K2 595 aaPredicted RBP5.82□□□□□ -1.48
RNU2-55P-201ENST00000411146 CDAN1Q8IWY9 1227 aa5.82□□□□□ -1.48
RNU2-55P-201ENST00000411146 RNF25Q96BH1 459 aaPredicted RBP5.8□□□□□ -1.48
RNU2-55P-201ENST00000411146 CABP2Q9NPB3 220 aa5.8□□□□□ -1.48
RNU2-55P-201ENST00000411146 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.8□□□□□ -1.48
RNU2-55P-201ENST00000411146 PDAP1Q13442 181 aaKnown RBP5.79□□□□□ -1.48
RNU2-55P-201ENST00000411146 ILDR1Q86SU0 546 aaPredicted RBP5.79□□□□□ -1.48
RNU2-55P-201ENST00000411146 MKRN3Q13064 507 aaKnown RBP5.78□□□□□ -1.48
RNU2-55P-201ENST00000411146 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.78□□□□□ -1.48
RNU2-55P-201ENST00000411146 EFCAB3Q8N7B9 438 aa5.76□□□□□ -1.49
RNU2-55P-201ENST00000411146 MARVELD3Q96A59 401 aa5.76□□□□□ -1.49
RNU2-55P-201ENST00000411146 POTEB3A0JP26 581 aa5.75□□□□□ -1.49
RNU2-55P-201ENST00000411146 GOLGA2Q08379 1002 aa5.75□□□□□ -1.49
RNU2-55P-201ENST00000411146 POTEBQ6S5H4 581 aa5.75□□□□□ -1.49
RNU2-55P-201ENST00000411146 TMEM121BQ9BXQ6 578 aaPredicted RBP5.75□□□□□ -1.49
RNU2-55P-201ENST00000411146 SNPHO15079 494 aa5.74□□□□□ -1.49
RNU2-55P-201ENST00000411146 L3MBTL3Q96JM7 780 aaPredicted RBP5.74□□□□□ -1.49
RNU2-55P-201ENST00000411146 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.72□□□□□ -1.49
RNU2-55P-201ENST00000411146 ZFP91Q96JP5 570 aaPredicted RBP5.72□□□□□ -1.49
RNU2-55P-201ENST00000411146 C3orf67Q6ZVT6 689 aa5.71□□□□□ -1.5
RNU2-55P-201ENST00000411146 MS4A4AQ96JQ5 239 aa5.71□□□□□ -1.5
RNU2-55P-201ENST00000411146 TMEM92Q6UXU6 159 aa5.7□□□□□ -1.5
RNU2-55P-201ENST00000411146 BOLA1Q9Y3E2 137 aa5.7□□□□□ -1.5
RNU2-55P-201ENST00000411146 RIOK3O14730 519 aaKnown RBP5.69□□□□□ -1.5
RNU2-55P-201ENST00000411146 HOXB3P14651 431 aaPredicted RBP5.69□□□□□ -1.5
RNU2-55P-201ENST00000411146 SPNS2Q8IVW8 549 aa5.69□□□□□ -1.5
RNU2-55P-201ENST00000411146 PHF8Q9UPP1 1060 aa5.69□□□□□ -1.5
RNU2-55P-201ENST00000411146 MMRN1Q13201 1228 aa5.67□□□□□ -1.5
RNU2-55P-201ENST00000411146 PKD2Q13563 968 aa5.66□□□□□ -1.5
RNU2-55P-201ENST00000411146 EMP3P54852 163 aa5.65□□□□□ -1.5
RNU2-55P-201ENST00000411146 HS3ST6Q96QI5 342 aa5.65□□□□□ -1.5
RNU2-55P-201ENST00000411146 KRTAP3-3Q9BYR6 98 aa5.65□□□□□ -1.5
RNU2-55P-201ENST00000411146 KRTAP3-2Q9BYR7 98 aa5.65□□□□□ -1.5
RNU2-55P-201ENST00000411146 FAM205CA6NFA0 338 aa5.64□□□□□ -1.51
RNU2-55P-201ENST00000411146 RGL2O15211 777 aa5.64□□□□□ -1.51
RNU2-55P-201ENST00000411146 MICALL2Q8IY33 904 aa5.64□□□□□ -1.51
RNU2-55P-201ENST00000411146 TRIM41Q8WV44 630 aa5.64□□□□□ -1.51
RNU2-55P-201ENST00000411146 VGFO15240 615 aaPredicted RBP5.63□□□□□ -1.51
RNU2-55P-201ENST00000411146 BCL11BQ9C0K0 894 aaPredicted RBP5.63□□□□□ -1.51
RNU2-55P-201ENST00000411146 FBXO22Q8NEZ5 403 aa5.62□□□□□ -1.51
RNU2-55P-201ENST00000411146 SOX12O15370 315 aa5.61□□□□□ -1.51
RNU2-55P-201ENST00000411146 MFRPQ9BY79 579 aa5.61□□□□□ -1.51
RNU2-55P-201ENST00000411146 STK24Q9Y6E0 443 aa5.61□□□□□ -1.51
RNU2-55P-201ENST00000411146 ECM2O94769 699 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms