RNA–Protein interactions for RNA: ENST00000409240.5

DCTN1-203, Transcript of dynactin subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DCTN1, Length 4,365 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCTN1-203ENST00000409240 CLIP1P30622 1438 aa20.21■□□□□ 0.83
DCTN1-203ENST00000409240 DEKP35659 375 aaKnown RBP20.19■□□□□ 0.82
DCTN1-203ENST00000409240 RGS3P49796 1198 aa20.18■□□□□ 0.82
DCTN1-203ENST00000409240 NOP58Q9Y2X3 529 aaKnown RBP20.18■□□□□ 0.82
DCTN1-203ENST00000409240 TPRNQ4KMQ1 711 aa20.15■□□□□ 0.82
DCTN1-203ENST00000409240 CEP162Q5TB80 1403 aa20.15■□□□□ 0.82
DCTN1-203ENST00000409240 PPP4R2Q9NY27 417 aa20.14■□□□□ 0.82
DCTN1-203ENST00000409240 RGL3Q3MIN7 710 aa20.14■□□□□ 0.81
DCTN1-203ENST00000409240 TRIM44Q96DX7 344 aaPredicted RBP20.13■□□□□ 0.81
DCTN1-203ENST00000409240 TSHZ2Q9NRE2 1034 aa20.11■□□□□ 0.81
DCTN1-203ENST00000409240 MTUS2Q5JR59 1369 aa20.1■□□□□ 0.81
DCTN1-203ENST00000409240 NEUROD2Q15784 382 aa20.09■□□□□ 0.81
DCTN1-203ENST00000409240 NCLP19338 710 aaKnown RBP20.09■□□□□ 0.81
DCTN1-203ENST00000409240 NAP1L5Q96NT1 182 aaPredicted RBP20.08■□□□□ 0.8
DCTN1-203ENST00000409240 PLPPR3Q6T4P5 718 aa20.07■□□□□ 0.8
DCTN1-203ENST00000409240 DDRGK1Q96HY6 314 aa20.07■□□□□ 0.8
DCTN1-203ENST00000409240 ARID4BQ4LE39 1312 aaPredicted RBP20.06■□□□□ 0.8
DCTN1-203ENST00000409240 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.06■□□□□ 0.8
DCTN1-203ENST00000409240 BECN1Q14457 450 aa20.04■□□□□ 0.8
DCTN1-203ENST00000409240 PPM1GO15355 546 aaPredicted RBP20.04■□□□□ 0.8
DCTN1-203ENST00000409240 ERICH6BQ5W0A0 696 aa20.03■□□□□ 0.8
DCTN1-203ENST00000409240 SCRIBQ14160 1630 aa20.02■□□□□ 0.8
DCTN1-203ENST00000409240 TSPY4P0CV99 314 aa20.01■□□□□ 0.79
DCTN1-203ENST00000409240 TSPY10P0CW01 314 aa20.01■□□□□ 0.79
DCTN1-203ENST00000409240 STAG3Q9UJ98 1225 aa19.99■□□□□ 0.79
DCTN1-203ENST00000409240 CCDC180Q9P1Z9 1646 aa19.97■□□□□ 0.79
DCTN1-203ENST00000409240 PLEKHG5O94827 1062 aa19.97■□□□□ 0.79
DCTN1-203ENST00000409240 FRAT1Q92837 279 aaPredicted RBP19.95■□□□□ 0.78
DCTN1-203ENST00000409240 SPRYD3Q8NCJ5 442 aa19.94■□□□□ 0.78
DCTN1-203ENST00000409240 KCNH8Q96L42 1107 aa19.93■□□□□ 0.78
DCTN1-203ENST00000409240 ZCCHC6Q5VYS8 1495 aaKnown RBP19.92■□□□□ 0.78
DCTN1-203ENST00000409240 DNTTIP2Q5QJE6 756 aaKnown RBP19.92■□□□□ 0.78
DCTN1-203ENST00000409240 PTMAP06454 111 aaKnown RBP19.91■□□□□ 0.78
DCTN1-203ENST00000409240 CARD11Q9BXL7 1154 aa19.91■□□□□ 0.78
DCTN1-203ENST00000409240 TNNT2P45379 298 aaPredicted RBP19.89■□□□□ 0.77
DCTN1-203ENST00000409240 CC2D1BQ5T0F9 858 aaKnown RBP19.88■□□□□ 0.77
DCTN1-203ENST00000409240 MYH16Q9H6N6 1097 aa19.88■□□□□ 0.77
DCTN1-203ENST00000409240 PLCB2Q00722 1185 aa19.87■□□□□ 0.77
DCTN1-203ENST00000409240 GOLGA6L22H0YM25 854 aa19.87■□□□□ 0.77
DCTN1-203ENST00000409240 RSF1Q96T23 1441 aaPredicted RBP19.83■□□□□ 0.77
DCTN1-203ENST00000409240 KNSTRNQ9Y448 316 aa19.83■□□□□ 0.76
DCTN1-203ENST00000409240 ZBTB7CA1YPR0 619 aa19.81■□□□□ 0.76
DCTN1-203ENST00000409240 FTSJ3Q8IY81 847 aaKnown RBP19.81■□□□□ 0.76
DCTN1-203ENST00000409240 ARID3AQ99856 593 aa19.81■□□□□ 0.76
DCTN1-203ENST00000409240 GZF1Q9H116 711 aaPredicted RBP19.79■□□□□ 0.76
DCTN1-203ENST00000409240 TNIKQ9UKE5 1360 aa19.79■□□□□ 0.76
DCTN1-203ENST00000409240 GOLGA3Q08378 1498 aa19.79■□□□□ 0.76
DCTN1-203ENST00000409240 SLKQ9H2G2 1235 aaPredicted RBP19.78■□□□□ 0.76
DCTN1-203ENST00000409240 AMER1Q5JTC6 1135 aaPredicted RBP19.76■□□□□ 0.75
DCTN1-203ENST00000409240 ESF1Q9H501 851 aaKnown RBP19.76■□□□□ 0.75
DCTN1-203ENST00000409240 FOXD1Q16676 465 aa19.76■□□□□ 0.75
DCTN1-203ENST00000409240 TAOK2Q9UL54 1235 aa19.74■□□□□ 0.75
DCTN1-203ENST00000409240 KANK4Q5T7N3 995 aaPredicted RBP19.73■□□□□ 0.75
DCTN1-203ENST00000409240 HSPA5P11021 654 aaKnown RBP19.72■□□□□ 0.75
DCTN1-203ENST00000409240 CCER2I3L3R5 266 aa19.71■□□□□ 0.75
DCTN1-203ENST00000409240 HSP90AB1P08238 724 aaKnown RBP19.69■□□□□ 0.74
DCTN1-203ENST00000409240 CCNB3Q8WWL7 1395 aa19.68■□□□□ 0.74
DCTN1-203ENST00000409240 CFDP1Q9UEE9 299 aaPredicted RBP19.67■□□□□ 0.74
DCTN1-203ENST00000409240 SOGA1O94964 1423 aa19.65■□□□□ 0.74
DCTN1-203ENST00000409240 DCAF11Q8TEB1 546 aa19.65■□□□□ 0.74
DCTN1-203ENST00000409240 WRNQ14191 1432 aaPredicted RBP eCLIP19.63■□□□□ 0.73
DCTN1-203ENST00000409240 U2SURPO15042 1029 aaKnown RBP19.63■□□□□ 0.73
DCTN1-203ENST00000409240 SLC4A3P48751 1232 aa19.63■□□□□ 0.73
DCTN1-203ENST00000409240 CFAP53Q96M91 514 aa19.62■□□□□ 0.73
DCTN1-203ENST00000409240 C14orf37Q86TY3 774 aa19.62■□□□□ 0.73
DCTN1-203ENST00000409240 A0A0G2JS52 829 aa19.61■□□□□ 0.73
DCTN1-203ENST00000409240 IPO9Q96P70 1041 aaKnown RBP19.6■□□□□ 0.73
DCTN1-203ENST00000409240 CHMP7Q8WUX9 453 aaPredicted RBP19.59■□□□□ 0.73
DCTN1-203ENST00000409240 RCAN3Q9UKA8 241 aa19.59■□□□□ 0.73
DCTN1-203ENST00000409240 EEA1Q15075 1411 aa19.59■□□□□ 0.73
DCTN1-203ENST00000409240 PNNQ9H307 717 aaKnown RBP19.58■□□□□ 0.72
DCTN1-203ENST00000409240 PLEKHD1A6NEE1 506 aa19.57■□□□□ 0.72
DCTN1-203ENST00000409240 APBB1O00213 710 aa19.56■□□□□ 0.72
DCTN1-203ENST00000409240 HSCBQ8IWL3 235 aa19.55■□□□□ 0.72
DCTN1-203ENST00000409240 MAPK8IP3Q9UPT6 1336 aa19.55■□□□□ 0.72
DCTN1-203ENST00000409240 NPM1P06748 294 aaKnown RBP eCLIP19.53■□□□□ 0.72
DCTN1-203ENST00000409240 MSNP26038 577 aaKnown RBP19.53■□□□□ 0.72
DCTN1-203ENST00000409240 ZRSR1Q15695 479 aaKnown RBP19.53■□□□□ 0.72
DCTN1-203ENST00000409240 BAZ1BQ9UIG0 1483 aaKnown RBP19.52■□□□□ 0.72
DCTN1-203ENST00000409240 CEP164Q9UPV0 1460 aa19.52■□□□□ 0.71
DCTN1-203ENST00000409240 L1TD1Q5T7N2 865 aaKnown RBP19.51■□□□□ 0.71
DCTN1-203ENST00000409240 PPP1R15AO75807 674 aaPredicted RBP19.51■□□□□ 0.71
DCTN1-203ENST00000409240 CDCA8Q53HL2 280 aa19.51■□□□□ 0.71
DCTN1-203ENST00000409240 CASC1Q6TDU7 716 aa19.5■□□□□ 0.71
DCTN1-203ENST00000409240 TCERG1O14776 1098 aaKnown RBP19.49■□□□□ 0.71
DCTN1-203ENST00000409240 CLUAP1Q96AJ1 413 aa19.48■□□□□ 0.71
DCTN1-203ENST00000409240 RAB3GAP2Q9H2M9 1393 aa19.48■□□□□ 0.71
DCTN1-203ENST00000409240 SAFB2Q14151 953 aaKnown RBP eCLIP19.48■□□□□ 0.71
DCTN1-203ENST00000409240 SOX12O15370 315 aa19.46■□□□□ 0.71
DCTN1-203ENST00000409240 FOXD4L1Q9NU39 408 aa19.46■□□□□ 0.71
DCTN1-203ENST00000409240 CDK11BP21127 795 aaKnown RBP19.46■□□□□ 0.71
DCTN1-203ENST00000409240 TIMELESSQ9UNS1 1208 aa19.45■□□□□ 0.7
DCTN1-203ENST00000409240 PLIN1O60240 522 aa19.45■□□□□ 0.7
DCTN1-203ENST00000409240 NUDCQ9Y266 331 aa19.44■□□□□ 0.7
DCTN1-203ENST00000409240 SETD5Q9C0A6 1442 aa19.44■□□□□ 0.7
DCTN1-203ENST00000409240 NAP1L2Q9ULW6 460 aaPredicted RBP19.43■□□□□ 0.7
DCTN1-203ENST00000409240 TMF1P82094 1093 aa19.42■□□□□ 0.7
DCTN1-203ENST00000409240 MFAP1P55081 439 aaKnown RBP19.42■□□□□ 0.7
DCTN1-203ENST00000409240 KCNJ4P48050 445 aa19.42■□□□□ 0.7
DCTN1-203ENST00000409240 TULP1O00294 542 aaPredicted RBP19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms