RNA–Protein interactions for RNA: ENST00000408512.1

RNU4ATAC16P-201, Transcript of RNA, U4atac small nuclear 16, pseudogene, humanhuman

BASIC

Gene RNU4ATAC16P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC16P-201ENST00000408512 ATXN8OSP0DMR3 200 aa3.88□□□□□ -1.79
RNU4ATAC16P-201ENST00000408512 REM2Q8IYK8 340 aaPredicted RBP3.88□□□□□ -1.79
RNU4ATAC16P-201ENST00000408512 IGSF3O75054 1194 aa3.87□□□□□ -1.79
RNU4ATAC16P-201ENST00000408512 AKT1S1Q96B36 256 aa3.87□□□□□ -1.79
RNU4ATAC16P-201ENST00000408512 CCDC9Q9Y3X0 531 aaKnown RBP3.87□□□□□ -1.79
RNU4ATAC16P-201ENST00000408512 POLA2Q14181 598 aa3.86□□□□□ -1.79
RNU4ATAC16P-201ENST00000408512 IFNLR1Q8IU57 520 aaPredicted RBP3.86□□□□□ -1.79
RNU4ATAC16P-201ENST00000408512 PITPNM1O00562 1244 aa3.85□□□□□ -1.79
RNU4ATAC16P-201ENST00000408512 BRPF1P55201 1214 aaPredicted RBP3.85□□□□□ -1.79
RNU4ATAC16P-201ENST00000408512 GABBR2O75899 941 aa3.84□□□□□ -1.79
RNU4ATAC16P-201ENST00000408512 VASPP50552 380 aaPredicted RBP3.83□□□□□ -1.8
RNU4ATAC16P-201ENST00000408512 SAMD1Q6SPF0 538 aaPredicted RBP3.83□□□□□ -1.8
RNU4ATAC16P-201ENST00000408512 NECTIN2Q92692 538 aa3.83□□□□□ -1.8
RNU4ATAC16P-201ENST00000408512 CHMP4AQ9BY43 222 aa3.83□□□□□ -1.8
RNU4ATAC16P-201ENST00000408512 CDK11BP21127 795 aaKnown RBP3.82□□□□□ -1.8
RNU4ATAC16P-201ENST00000408512 ARID3AQ99856 593 aa3.82□□□□□ -1.8
RNU4ATAC16P-201ENST00000408512 ZMYND15Q9H091 742 aa3.82□□□□□ -1.8
RNU4ATAC16P-201ENST00000408512 CDK11AQ9UQ88 783 aaPredicted RBP3.82□□□□□ -1.8
RNU4ATAC16P-201ENST00000408512 ZBTB7CA1YPR0 619 aa3.81□□□□□ -1.8
RNU4ATAC16P-201ENST00000408512 POTEIP0CG38 1075 aa3.81□□□□□ -1.8
RNU4ATAC16P-201ENST00000408512 HMGB1P09429 215 aaKnown RBP3.8□□□□□ -1.8
RNU4ATAC16P-201ENST00000408512 PDIA4P13667 645 aaKnown RBP3.8□□□□□ -1.8
RNU4ATAC16P-201ENST00000408512 RSPH6AQ9H0K4 717 aa3.8□□□□□ -1.8
RNU4ATAC16P-201ENST00000408512 C1orf115Q9H7X2 142 aa3.8□□□□□ -1.8
RNU4ATAC16P-201ENST00000408512 HSP90B1P14625 803 aaKnown RBP3.79□□□□□ -1.8
RNU4ATAC16P-201ENST00000408512 C19orf67A6NJJ6 358 aa3.78□□□□□ -1.8
RNU4ATAC16P-201ENST00000408512 ECM2O94769 699 aaPredicted RBP3.78□□□□□ -1.8
RNU4ATAC16P-201ENST00000408512 PUS7Q96PZ0 661 aaKnown RBP3.78□□□□□ -1.8
RNU4ATAC16P-201ENST00000408512 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.76□□□□□ -1.81
RNU4ATAC16P-201ENST00000408512 RGL2O15211 777 aa3.76□□□□□ -1.81
RNU4ATAC16P-201ENST00000408512 HNRNPUL2Q1KMD3 747 aaKnown RBP3.76□□□□□ -1.81
RNU4ATAC16P-201ENST00000408512 MYCNP04198 464 aaPredicted RBP3.75□□□□□ -1.81
RNU4ATAC16P-201ENST00000408512 NEUROD2Q15784 382 aa3.75□□□□□ -1.81
RNU4ATAC16P-201ENST00000408512 OSCARQ8IYS5 282 aa3.75□□□□□ -1.81
RNU4ATAC16P-201ENST00000408512 UBE2Q2Q8WVN8 375 aa3.75□□□□□ -1.81
RNU4ATAC16P-201ENST00000408512 POTEMA6NI47 508 aa3.74□□□□□ -1.81
RNU4ATAC16P-201ENST00000408512 BRD2P25440 801 aaKnown RBP3.74□□□□□ -1.81
RNU4ATAC16P-201ENST00000408512 RGS22Q8NE09 1264 aa3.74□□□□□ -1.81
RNU4ATAC16P-201ENST00000408512 PRKAR2AP13861 404 aaKnown RBP3.73□□□□□ -1.81
RNU4ATAC16P-201ENST00000408512 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.73□□□□□ -1.81
RNU4ATAC16P-201ENST00000408512 DHX37Q8IY37 1157 aaKnown RBP3.73□□□□□ -1.81
RNU4ATAC16P-201ENST00000408512 RAD21O60216 631 aa3.72□□□□□ -1.81
RNU4ATAC16P-201ENST00000408512 CHGAP10645 457 aaKnown RBP3.72□□□□□ -1.81
RNU4ATAC16P-201ENST00000408512 LMOD2Q6P5Q4 547 aa3.72□□□□□ -1.81
RNU4ATAC16P-201ENST00000408512 PROM2Q8N271 834 aa3.72□□□□□ -1.81
RNU4ATAC16P-201ENST00000408512 KCTD17Q8N5Z5 321 aa3.72□□□□□ -1.81
RNU4ATAC16P-201ENST00000408512 ATF5Q9Y2D1 282 aaPredicted RBP3.72□□□□□ -1.81
RNU4ATAC16P-201ENST00000408512 ARID3CA6NKF2 412 aa3.71□□□□□ -1.82
RNU4ATAC16P-201ENST00000408512 POTEGQ6S5H5 508 aa3.71□□□□□ -1.82
RNU4ATAC16P-201ENST00000408512 ZNF428Q96B54 188 aa3.71□□□□□ -1.82
RNU4ATAC16P-201ENST00000408512 OTUD5Q96G74 571 aa3.71□□□□□ -1.82
RNU4ATAC16P-201ENST00000408512 MTMR7Q9Y216 660 aa3.71□□□□□ -1.82
RNU4ATAC16P-201ENST00000408512 APBB1O00213 710 aa3.7□□□□□ -1.82
RNU4ATAC16P-201ENST00000408512 POTEB2H3BUK9 544 aa3.69□□□□□ -1.82
RNU4ATAC16P-201ENST00000408512 SPDYE4A6NLX3 237 aa3.68□□□□□ -1.82
RNU4ATAC16P-201ENST00000408512 FOXD4L5Q5VV16 416 aaPredicted RBP3.68□□□□□ -1.82
RNU4ATAC16P-201ENST00000408512 FOXD4L4Q8WXT5 416 aaPredicted RBP3.68□□□□□ -1.82
RNU4ATAC16P-201ENST00000408512 SLC24A3Q9HC58 644 aa3.68□□□□□ -1.82
RNU4ATAC16P-201ENST00000408512 RBM25P49756 843 aaKnown RBP3.67□□□□□ -1.82
RNU4ATAC16P-201ENST00000408512 SPOCK2Q92563 424 aa3.67□□□□□ -1.82
RNU4ATAC16P-201ENST00000408512 PDE4CQ08493 712 aa3.66□□□□□ -1.82
RNU4ATAC16P-201ENST00000408512 CHADLQ6NUI6 762 aa3.66□□□□□ -1.82
RNU4ATAC16P-201ENST00000408512 FAM9AQ8IZU1 332 aaPredicted RBP3.66□□□□□ -1.82
RNU4ATAC16P-201ENST00000408512 ZC3H15Q8WU90 426 aaKnown RBP3.66□□□□□ -1.82
RNU4ATAC16P-201ENST00000408512 TRAIPQ9BWF2 469 aa3.66□□□□□ -1.82
RNU4ATAC16P-201ENST00000408512 TAF7LQ5H9L4 462 aa3.65□□□□□ -1.83
RNU4ATAC16P-201ENST00000408512 BCL11AQ9H165 835 aa3.65□□□□□ -1.83
RNU4ATAC16P-201ENST00000408512 MFAP1P55081 439 aaKnown RBP3.64□□□□□ -1.83
RNU4ATAC16P-201ENST00000408512 AEBP1Q8IUX7 1158 aa3.64□□□□□ -1.83
RNU4ATAC16P-201ENST00000408512 POLR3GLQ9BT43 218 aa3.64□□□□□ -1.83
RNU4ATAC16P-201ENST00000408512 ZNF692Q9BU19 519 aaPredicted RBP3.64□□□□□ -1.83
RNU4ATAC16P-201ENST00000408512 GTPBP6O43824 516 aaPredicted RBP3.63□□□□□ -1.83
RNU4ATAC16P-201ENST00000408512 MKRN3Q13064 507 aaKnown RBP3.63□□□□□ -1.83
RNU4ATAC16P-201ENST00000408512 NKX1-1Q15270 411 aaPredicted RBP3.63□□□□□ -1.83
RNU4ATAC16P-201ENST00000408512 LCE2DQ5TA82 110 aaPredicted RBP3.63□□□□□ -1.83
RNU4ATAC16P-201ENST00000408512 TMCO4Q5TGY1 634 aa3.63□□□□□ -1.83
RNU4ATAC16P-201ENST00000408512 HS6ST3Q8IZP7 471 aa3.63□□□□□ -1.83
RNU4ATAC16P-201ENST00000408512 FAM177A1Q8N128 213 aaPredicted RBP3.63□□□□□ -1.83
RNU4ATAC16P-201ENST00000408512 E9PSI1 815 aa3.62□□□□□ -1.83
RNU4ATAC16P-201ENST00000408512 CCDC82Q8N4S0 544 aa3.62□□□□□ -1.83
RNU4ATAC16P-201ENST00000408512 IL27Q8NEV9 243 aa3.62□□□□□ -1.83
RNU4ATAC16P-201ENST00000408512 GZF1Q9H116 711 aaPredicted RBP3.62□□□□□ -1.83
RNU4ATAC16P-201ENST00000408512 USP35Q9P2H5 1018 aa3.62□□□□□ -1.83
RNU4ATAC16P-201ENST00000408512 CLEC11AQ9Y240 323 aa3.62□□□□□ -1.83
RNU4ATAC16P-201ENST00000408512 ZBTB12Q9Y330 459 aaPredicted RBP3.62□□□□□ -1.83
RNU4ATAC16P-201ENST00000408512 PCDH10Q9P2E7 1040 aa3.61□□□□□ -1.83
RNU4ATAC16P-201ENST00000408512 P3H3Q8IVL6 736 aa3.6□□□□□ -1.83
RNU4ATAC16P-201ENST00000408512 GPBP1L1Q9HC44 474 aaPredicted RBP3.6□□□□□ -1.83
RNU4ATAC16P-201ENST00000408512 KCNV2Q8TDN2 545 aa3.59□□□□□ -1.83
RNU4ATAC16P-201ENST00000408512 WDR70Q9NW82 654 aa3.59□□□□□ -1.83
RNU4ATAC16P-201ENST00000408512 ZMYND10O75800 440 aa3.58□□□□□ -1.84
RNU4ATAC16P-201ENST00000408512 POTEJP0CG39 1038 aa3.58□□□□□ -1.84
RNU4ATAC16P-201ENST00000408512 RSPH4AQ5TD94 716 aa3.58□□□□□ -1.84
RNU4ATAC16P-201ENST00000408512 DCBLD2Q96PD2 775 aa3.58□□□□□ -1.84
RNU4ATAC16P-201ENST00000408512 CWC22Q9HCG8 908 aaKnown RBP3.58□□□□□ -1.84
RNU4ATAC16P-201ENST00000408512 TRAK2O60296 914 aa3.57□□□□□ -1.84
RNU4ATAC16P-201ENST00000408512 NEFLP07196 543 aa3.57□□□□□ -1.84
RNU4ATAC16P-201ENST00000408512 CD44P16070 742 aaKnown RBP3.57□□□□□ -1.84
RNU4ATAC16P-201ENST00000408512 CERS3Q8IU89 383 aa3.57□□□□□ -1.84
RNU4ATAC16P-201ENST00000408512 SPDYE1Q8NFV5 336 aaPredicted RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms