RNA–Protein interactions for RNA: ENST00000407180.1

RAP1BP3-201, Transcript of RAP1B, member of RAS oncogene family pseudogene 3, humanhuman

BASIC

Gene RAP1BP3, Length 549 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1BP3-201ENST00000407180 ATMINO43313 823 aaPredicted RBP14.97□□□□□ -0.01
RAP1BP3-201ENST00000407180 METRNQ9UJH8 293 aa14.96□□□□□ -0.01
RAP1BP3-201ENST00000407180 POTEGQ6S5H5 508 aa14.94□□□□□ -0.02
RAP1BP3-201ENST00000407180 POTEJP0CG39 1038 aa14.93□□□□□ -0.02
RAP1BP3-201ENST00000407180 SLC39A7Q92504 469 aa14.9□□□□□ -0.02
RAP1BP3-201ENST00000407180 CCDC61Q9Y6R9 512 aa14.9□□□□□ -0.02
RAP1BP3-201ENST00000407180 C7P10643 843 aa14.88□□□□□ -0.03
RAP1BP3-201ENST00000407180 TSPYL2Q9H2G4 693 aaPredicted RBP14.88□□□□□ -0.03
RAP1BP3-201ENST00000407180 ATN1P54259 1190 aaPredicted RBP14.83□□□□□ -0.04
RAP1BP3-201ENST00000407180 KIF12Q96FN5 646 aa14.82□□□□□ -0.04
RAP1BP3-201ENST00000407180 TRPC6Q9Y210 931 aa14.78□□□□□ -0.04
RAP1BP3-201ENST00000407180 POTEFA5A3E0 1075 aa14.75□□□□□ -0.05
RAP1BP3-201ENST00000407180 LCE2DQ5TA82 110 aaPredicted RBP14.75□□□□□ -0.05
RAP1BP3-201ENST00000407180 BMP2KQ9NSY1 1161 aaPredicted RBP14.75□□□□□ -0.05
RAP1BP3-201ENST00000407180 MAMSTRQ6ZN01 415 aa14.74□□□□□ -0.05
RAP1BP3-201ENST00000407180 PCDH10Q9P2E7 1040 aa14.74□□□□□ -0.05
RAP1BP3-201ENST00000407180 RASEFQ8IZ41 740 aa14.71□□□□□ -0.05
RAP1BP3-201ENST00000407180 MAP3K13O43283 966 aa14.7□□□□□ -0.06
RAP1BP3-201ENST00000407180 TIE1P35590 1138 aa14.67□□□□□ -0.06
RAP1BP3-201ENST00000407180 SCUBE2Q9NQ36 999 aa14.65□□□□□ -0.06
RAP1BP3-201ENST00000407180 MIER1Q8N108 512 aa14.63□□□□□ -0.07
RAP1BP3-201ENST00000407180 TTLL13PA6NNM8 815 aa14.59□□□□□ -0.07
RAP1BP3-201ENST00000407180 PLEKHG5O94827 1062 aa14.59□□□□□ -0.07
RAP1BP3-201ENST00000407180 FAM163AQ96GL9 167 aaPredicted RBP14.58□□□□□ -0.08
RAP1BP3-201ENST00000407180 COLQQ9Y215 455 aaPredicted RBP14.58□□□□□ -0.08
RAP1BP3-201ENST00000407180 SGIP1Q9BQI5 828 aa14.5□□□□□ -0.09
RAP1BP3-201ENST00000407180 NUBP1P53384 320 aa14.49□□□□□ -0.09
RAP1BP3-201ENST00000407180 TRIM35Q9UPQ4 493 aa14.49□□□□□ -0.09
RAP1BP3-201ENST00000407180 PLCD3Q8N3E9 789 aa14.47□□□□□ -0.09
RAP1BP3-201ENST00000407180 PCDHB13Q9Y5F0 798 aa14.47□□□□□ -0.09
RAP1BP3-201ENST00000407180 SEC24BO95487 1268 aa14.46□□□□□ -0.09
RAP1BP3-201ENST00000407180 IER5LQ5T953 404 aa14.46□□□□□ -0.09
RAP1BP3-201ENST00000407180 IFNL1Q8IU54 200 aa14.42□□□□□ -0.1
RAP1BP3-201ENST00000407180 ZBTB47Q9UFB7 747 aaPredicted RBP14.39□□□□□ -0.11
RAP1BP3-201ENST00000407180 TMEM106CQ9BVX2 250 aa14.33□□□□□ -0.12
RAP1BP3-201ENST00000407180 FAM212AQ96EL1 285 aa14.32□□□□□ -0.12
RAP1BP3-201ENST00000407180 CDAN1Q8IWY9 1227 aa14.31□□□□□ -0.12
RAP1BP3-201ENST00000407180 IRX5P78411 483 aaPredicted RBP14.29□□□□□ -0.12
RAP1BP3-201ENST00000407180 SLAIN1Q8ND83 568 aa14.29□□□□□ -0.12
RAP1BP3-201ENST00000407180 ST18O60284 1047 aa14.25□□□□□ -0.13
RAP1BP3-201ENST00000407180 PLCG2P16885 1265 aa14.25□□□□□ -0.13
RAP1BP3-201ENST00000407180 FKBP8Q14318 412 aa14.2□□□□□ -0.14
RAP1BP3-201ENST00000407180 PYGBP11216 843 aa14.16□□□□□ -0.14
RAP1BP3-201ENST00000407180 OCEL1Q9H607 264 aa14.14□□□□□ -0.15
RAP1BP3-201ENST00000407180 DCAF8Q5TAQ9 597 aa14.12□□□□□ -0.15
RAP1BP3-201ENST00000407180 PCDHB8Q9UN66 801 aa14.12□□□□□ -0.15
RAP1BP3-201ENST00000407180 TMEM121BQ9BXQ6 578 aaPredicted RBP14.06□□□□□ -0.16
RAP1BP3-201ENST00000407180 PDCD7Q8N8D1 485 aaKnown RBP14.05□□□□□ -0.16
RAP1BP3-201ENST00000407180 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.04□□□□□ -0.16
RAP1BP3-201ENST00000407180 MMRN1Q13201 1228 aa14.01□□□□□ -0.17
RAP1BP3-201ENST00000407180 SNPHO15079 494 aa13.98□□□□□ -0.17
RAP1BP3-201ENST00000407180 SPNS2Q8IVW8 549 aa13.98□□□□□ -0.17
RAP1BP3-201ENST00000407180 FBXO3Q9UK99 471 aa13.97□□□□□ -0.17
RAP1BP3-201ENST00000407180 MARVELD3Q96A59 401 aa13.96□□□□□ -0.17
RAP1BP3-201ENST00000407180 ZNF467Q7Z7K2 595 aaPredicted RBP13.94□□□□□ -0.18
RAP1BP3-201ENST00000407180 GSE1Q14687 1217 aa13.91□□□□□ -0.18
RAP1BP3-201ENST00000407180 VASPP50552 380 aaPredicted RBP13.89□□□□□ -0.19
RAP1BP3-201ENST00000407180 CHRM1P11229 460 aaPredicted RBP13.88□□□□□ -0.19
RAP1BP3-201ENST00000407180 C3orf67Q6ZVT6 689 aa13.88□□□□□ -0.19
RAP1BP3-201ENST00000407180 MKRN3Q13064 507 aaKnown RBP13.87□□□□□ -0.19
RAP1BP3-201ENST00000407180 ILDR1Q86SU0 546 aaPredicted RBP13.86□□□□□ -0.19
RAP1BP3-201ENST00000407180 L3MBTL3Q96JM7 780 aaPredicted RBP13.85□□□□□ -0.19
RAP1BP3-201ENST00000407180 GOLGA2Q08379 1002 aa13.84□□□□□ -0.19
RAP1BP3-201ENST00000407180 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.84□□□□□ -0.19
RAP1BP3-201ENST00000407180 PSEN1P49768 467 aa13.83□□□□□ -0.2
RAP1BP3-201ENST00000407180 KLHL34Q8N239 644 aa13.83□□□□□ -0.2
RAP1BP3-201ENST00000407180 POTEB3A0JP26 581 aa13.81□□□□□ -0.2
RAP1BP3-201ENST00000407180 EMP3P54852 163 aa13.81□□□□□ -0.2
RAP1BP3-201ENST00000407180 POTEBQ6S5H4 581 aa13.81□□□□□ -0.2
RAP1BP3-201ENST00000407180 KRTAP3-3Q9BYR6 98 aa13.79□□□□□ -0.2
RAP1BP3-201ENST00000407180 KRTAP3-2Q9BYR7 98 aa13.79□□□□□ -0.2
RAP1BP3-201ENST00000407180 HS3ST6Q96QI5 342 aa13.76□□□□□ -0.21
RAP1BP3-201ENST00000407180 DPY19L2Q6NUT2 758 aa13.75□□□□□ -0.21
RAP1BP3-201ENST00000407180 PDAP1Q13442 181 aaKnown RBP13.74□□□□□ -0.21
RAP1BP3-201ENST00000407180 FAM205CA6NFA0 338 aa13.71□□□□□ -0.21
RAP1BP3-201ENST00000407180 HOXB3P14651 431 aaPredicted RBP13.68□□□□□ -0.22
RAP1BP3-201ENST00000407180 CABP2Q9NPB3 220 aa13.68□□□□□ -0.22
RAP1BP3-201ENST00000407180 BOLA1Q9Y3E2 137 aa13.65□□□□□ -0.22
RAP1BP3-201ENST00000407180 IFNLR1Q8IU57 520 aaPredicted RBP13.63□□□□□ -0.23
RAP1BP3-201ENST00000407180 SPOCK2Q92563 424 aa13.61□□□□□ -0.23
RAP1BP3-201ENST00000407180 CIZ1Q9ULV3 898 aaPredicted RBP13.58□□□□□ -0.24
RAP1BP3-201ENST00000407180 HOXB1P14653 301 aaPredicted RBP13.57□□□□□ -0.24
RAP1BP3-201ENST00000407180 G3V3G9 751 aa13.55□□□□□ -0.24
RAP1BP3-201ENST00000407180 ZNF710Q8N1W2 664 aa13.5□□□□□ -0.25
RAP1BP3-201ENST00000407180 DOK7Q18PE1 504 aa13.49□□□□□ -0.25
RAP1BP3-201ENST00000407180 EFCAB3Q8N7B9 438 aa13.49□□□□□ -0.25
RAP1BP3-201ENST00000407180 TMEM92Q6UXU6 159 aa13.46□□□□□ -0.25
RAP1BP3-201ENST00000407180 ERBB3P21860 1342 aa13.45□□□□□ -0.26
RAP1BP3-201ENST00000407180 MICALL2Q8IY33 904 aa13.42□□□□□ -0.26
RAP1BP3-201ENST00000407180 VARS2Q5ST30 1063 aaKnown RBP13.4□□□□□ -0.26
RAP1BP3-201ENST00000407180 TRIM41Q8WV44 630 aa13.39□□□□□ -0.27
RAP1BP3-201ENST00000407180 RIMBP2O15034 1052 aa13.38□□□□□ -0.27
RAP1BP3-201ENST00000407180 RNF166Q96A37 237 aaPredicted RBP13.36□□□□□ -0.27
RAP1BP3-201ENST00000407180 MS4A4AQ96JQ5 239 aa13.36□□□□□ -0.27
RAP1BP3-201ENST00000407180 ZSWIM6Q9HCJ5 1215 aa13.36□□□□□ -0.27
RAP1BP3-201ENST00000407180 RNF25Q96BH1 459 aaPredicted RBP13.34□□□□□ -0.27
RAP1BP3-201ENST00000407180 GPR153Q6NV75 609 aa13.33□□□□□ -0.28
RAP1BP3-201ENST00000407180 ZNF687Q8N1G0 1237 aa13.31□□□□□ -0.28
RAP1BP3-201ENST00000407180 SOX12O15370 315 aa13.3□□□□□ -0.28
RAP1BP3-201ENST00000407180 MYT1LQ9UL68 1186 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms