RNA–Protein interactions for RNA: ENST00000399451.6

ANKRD28-201, Transcript of ankyrin repeat domain 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ANKRD28, Length 6,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-201ENST00000399451 MTUS2Q5JR59 1369 aa28.52■■■□□ 2.16
ANKRD28-201ENST00000399451 ARID4BQ4LE39 1312 aaPredicted RBP28.52■■■□□ 2.16
ANKRD28-201ENST00000399451 CLIP1P30622 1438 aa28.49■■■□□ 2.15
ANKRD28-201ENST00000399451 HAP1P54257 671 aaPredicted RBP28.49■■■□□ 2.15
ANKRD28-201ENST00000399451 IRX6P78412 446 aaPredicted RBP28.44■■■□□ 2.14
ANKRD28-201ENST00000399451 GLIPR1L2Q4G1C9 344 aa28.41■■■□□ 2.14
ANKRD28-201ENST00000399451 EIF4G2P78344 907 aaKnown RBP eCLIP28.41■■■□□ 2.146e-8■■■■■ 27.4
ANKRD28-201ENST00000399451 HIRIP3Q9BW71 556 aaPredicted RBP28.39■■■□□ 2.14
ANKRD28-201ENST00000399451 ARXQ96QS3 562 aa28.34■■■□□ 2.13
ANKRD28-201ENST00000399451 MYH16Q9H6N6 1097 aa28.33■■■□□ 2.13
ANKRD28-201ENST00000399451 GOLGA3Q08378 1498 aa28.31■■■□□ 2.12
ANKRD28-201ENST00000399451 CCDC180Q9P1Z9 1646 aa28.28■■■□□ 2.12
ANKRD28-201ENST00000399451 PLEKHD1A6NEE1 506 aa28.28■■■□□ 2.12
ANKRD28-201ENST00000399451 DDRGK1Q96HY6 314 aa28.27■■■□□ 2.12
ANKRD28-201ENST00000399451 RRP7BPQ9NSQ0 103 aa28.27■■■□□ 2.12
ANKRD28-201ENST00000399451 MYO15BQ96JP2 1530 aa28.27■■■□□ 2.12
ANKRD28-201ENST00000399451 CEP162Q5TB80 1403 aa28.27■■■□□ 2.12
ANKRD28-201ENST00000399451 EEA1Q15075 1411 aa28.26■■■□□ 2.12
ANKRD28-201ENST00000399451 RSF1Q96T23 1441 aaPredicted RBP28.24■■■□□ 2.11
ANKRD28-201ENST00000399451 BECN1Q14457 450 aa28.2■■■□□ 2.1
ANKRD28-201ENST00000399451 CDK11BP21127 795 aaKnown RBP28.2■■■□□ 2.1
ANKRD28-201ENST00000399451 RGL3Q3MIN7 710 aa28.15■■■□□ 2.1
ANKRD28-201ENST00000399451 LMOD2Q6P5Q4 547 aa28.1■■■□□ 2.09
ANKRD28-201ENST00000399451 ERCC6Q03468 1493 aa28.09■■■□□ 2.09
ANKRD28-201ENST00000399451 PPM1GO15355 546 aaPredicted RBP28.08■■■□□ 2.09
ANKRD28-201ENST00000399451 RB1CC1Q8TDY2 1594 aa28.07■■■□□ 2.08
ANKRD28-201ENST00000399451 TRHP20396 242 aaPredicted RBP28.06■■■□□ 2.08
ANKRD28-201ENST00000399451 ANP32EQ9BTT0 268 aa28.05■■■□□ 2.08
ANKRD28-201ENST00000399451 CFAP53Q96M91 514 aa28.02■■■□□ 2.08
ANKRD28-201ENST00000399451 NPHP1O15259 732 aa28.02■■■□□ 2.08
ANKRD28-201ENST00000399451 NCLP19338 710 aaKnown RBP28.02■■■□□ 2.08
ANKRD28-201ENST00000399451 SUPT16HQ9Y5B9 1047 aaKnown RBP28■■■□□ 2.07
ANKRD28-201ENST00000399451 GOLGA6L22H0YM25 854 aa27.99■■■□□ 2.07
ANKRD28-201ENST00000399451 TRIM44Q96DX7 344 aaPredicted RBP27.99■■■□□ 2.07
ANKRD28-201ENST00000399451 TNIKQ9UKE5 1360 aa27.99■■■□□ 2.07
ANKRD28-201ENST00000399451 WRNQ14191 1432 aaPredicted RBP eCLIP27.99■■■□□ 2.07
ANKRD28-201ENST00000399451 CFDP1Q9UEE9 299 aaPredicted RBP27.99■■■□□ 2.07
ANKRD28-201ENST00000399451 CDCA8Q53HL2 280 aa27.98■■■□□ 2.07
ANKRD28-201ENST00000399451 CEP164Q9UPV0 1460 aa27.96■■■□□ 2.07
ANKRD28-201ENST00000399451 KNSTRNQ9Y448 316 aa27.96■■■□□ 2.07
ANKRD28-201ENST00000399451 POGKQ9P215 609 aa27.94■■■□□ 2.06
ANKRD28-201ENST00000399451 CARD11Q9BXL7 1154 aa27.92■■■□□ 2.06
ANKRD28-201ENST00000399451 KIF27Q86VH2 1401 aa27.89■■■□□ 2.06
ANKRD28-201ENST00000399451 SENP3-EIF4A1A0A087X0R7 540 aa27.88■■■□□ 2.05
ANKRD28-201ENST00000399451 LAS1LQ9Y4W2 734 aaKnown RBP27.87■■■□□ 2.05
ANKRD28-201ENST00000399451 PPP4R2Q9NY27 417 aa27.87■■■□□ 2.05
ANKRD28-201ENST00000399451 TULP1O00294 542 aaPredicted RBP27.86■■■□□ 2.05
ANKRD28-201ENST00000399451 CASC1Q6TDU7 716 aa27.86■■■□□ 2.05
ANKRD28-201ENST00000399451 FTSJ3Q8IY81 847 aaKnown RBP27.86■■■□□ 2.05
ANKRD28-201ENST00000399451 BAZ1BQ9UIG0 1483 aaKnown RBP27.83■■■□□ 2.05
ANKRD28-201ENST00000399451 MAPK8IP3Q9UPT6 1336 aa27.8■■■□□ 2.04
ANKRD28-201ENST00000399451 MLECQ14165 292 aa27.8■■■□□ 2.04
ANKRD28-201ENST00000399451 SIN3AQ96ST3 1273 aa27.78■■■□□ 2.04
ANKRD28-201ENST00000399451 NEUROD2Q15784 382 aa27.75■■■□□ 2.03
ANKRD28-201ENST00000399451 PTMAP06454 111 aaKnown RBP27.74■■■□□ 2.03
ANKRD28-201ENST00000399451 NUDCQ9Y266 331 aa27.73■■■□□ 2.03
ANKRD28-201ENST00000399451 NOP58Q9Y2X3 529 aaKnown RBP27.71■■■□□ 2.03
ANKRD28-201ENST00000399451 TNNT2P45379 298 aaPredicted RBP27.7■■■□□ 2.02
ANKRD28-201ENST00000399451 ZRSR1Q15695 479 aaKnown RBP27.69■■■□□ 2.02
ANKRD28-201ENST00000399451 RGS3P49796 1198 aa27.67■■■□□ 2.02
ANKRD28-201ENST00000399451 TAOK2Q9UL54 1235 aa27.66■■■□□ 2.02
ANKRD28-201ENST00000399451 HDGFP51858 240 aaKnown RBP27.65■■■□□ 2.02
ANKRD28-201ENST00000399451 ERICH6BQ5W0A0 696 aa27.65■■■□□ 2.02
ANKRD28-201ENST00000399451 CCNB3Q8WWL7 1395 aa27.64■■■□□ 2.02
ANKRD28-201ENST00000399451 CC2D1BQ5T0F9 858 aaKnown RBP27.64■■■□□ 2.02
ANKRD28-201ENST00000399451 FRAT1Q92837 279 aaPredicted RBP27.64■■■□□ 2.01
ANKRD28-201ENST00000399451 TPRNQ4KMQ1 711 aa27.64■■■□□ 2.01
ANKRD28-201ENST00000399451 NACADO15069 1562 aa27.63■■■□□ 2.01
ANKRD28-201ENST00000399451 OS9Q13438 667 aaPredicted RBP27.63■■■□□ 2.01
ANKRD28-201ENST00000399451 GOLGA2Q08379 1002 aa27.63■■■□□ 2.01
ANKRD28-201ENST00000399451 KANK1Q14678 1352 aa27.62■■■□□ 2.01
ANKRD28-201ENST00000399451 EIF4G1Q04637 1599 aaKnown RBP27.61■■■□□ 2.01
ANKRD28-201ENST00000399451 CHMP4BQ9H444 224 aaKnown RBP27.61■■■□□ 2.01
ANKRD28-201ENST00000399451 U2SURPO15042 1029 aaKnown RBP27.6■■■□□ 2.01
ANKRD28-201ENST00000399451 SOX12O15370 315 aa27.6■■■□□ 2.01
ANKRD28-201ENST00000399451 DNTTIP2Q5QJE6 756 aaKnown RBP27.6■■■□□ 2.01
ANKRD28-201ENST00000399451 MS4A1P11836 297 aa27.59■■■□□ 2.01
ANKRD28-201ENST00000399451 FHAD1B1AJZ9 1412 aa27.59■■■□□ 2.01
ANKRD28-201ENST00000399451 B4GALNT3Q6L9W6 998 aa27.57■■■□□ 2
ANKRD28-201ENST00000399451 HSP90AB1P08238 724 aaKnown RBP27.54■■■□□ 2
ANKRD28-201ENST00000399451 TIMELESSQ9UNS1 1208 aa27.53■■■□□ 2
ANKRD28-201ENST00000399451 TMF1P82094 1093 aa27.53■■■□□ 2
ANKRD28-201ENST00000399451 CCER2I3L3R5 266 aa27.52■■■□□ 2
ANKRD28-201ENST00000399451 NAP1L5Q96NT1 182 aaPredicted RBP27.51■■□□□ 1.99
ANKRD28-201ENST00000399451 PNNQ9H307 717 aaKnown RBP27.51■■□□□ 1.99
ANKRD28-201ENST00000399451 SRPK2P78362 688 aaKnown RBP27.5■■□□□ 1.99
ANKRD28-201ENST00000399451 BAZ1AQ9NRL2 1556 aaPredicted RBP27.49■■□□□ 1.99
ANKRD28-201ENST00000399451 FGD1P98174 961 aa27.47■■□□□ 1.99
ANKRD28-201ENST00000399451 SAFB2Q14151 953 aaKnown RBP eCLIP27.46■■□□□ 1.99
ANKRD28-201ENST00000399451 DCAF11Q8TEB1 546 aa27.46■■□□□ 1.99
ANKRD28-201ENST00000399451 NAP1L2Q9ULW6 460 aaPredicted RBP27.46■■□□□ 1.99
ANKRD28-201ENST00000399451 RTN4Q9NQC3 1192 aaKnown RBP27.44■■□□□ 1.98
ANKRD28-201ENST00000399451 SETD5Q9C0A6 1442 aa27.44■■□□□ 1.98
ANKRD28-201ENST00000399451 KCNJ4P48050 445 aa27.43■■□□□ 1.98
ANKRD28-201ENST00000399451 GGT6Q6P531 493 aa27.42■■□□□ 1.98
ANKRD28-201ENST00000399451 HSCBQ8IWL3 235 aa27.41■■□□□ 1.98
ANKRD28-201ENST00000399451 PLCB2Q00722 1185 aa27.39■■□□□ 1.98
ANKRD28-201ENST00000399451 HSPA5P11021 654 aaKnown RBP27.38■■□□□ 1.97
ANKRD28-201ENST00000399451 CARMIL1Q5VZK9 1371 aa27.38■■□□□ 1.97
ANKRD28-201ENST00000399451 SOGA1O94964 1423 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms