RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 PPM1GO15355 546 aaPredicted RBP21.28■■□□□ 1
ITSN1-209ENST00000399352 DNTTIP2Q5QJE6 756 aaKnown RBP21.28■■□□□ 1
ITSN1-209ENST00000399352 MYH16Q9H6N6 1097 aa21.28■■□□□ 1
ITSN1-209ENST00000399352 NOP58Q9Y2X3 529 aaKnown RBP21.23■□□□□ 0.99
ITSN1-209ENST00000399352 TPRNQ4KMQ1 711 aa21.22■□□□□ 0.99
ITSN1-209ENST00000399352 STAG3Q9UJ98 1225 aa21.21■□□□□ 0.99
ITSN1-209ENST00000399352 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.21■□□□□ 0.991e-6■■■■□ 23.9
ITSN1-209ENST00000399352 CDK11BP21127 795 aaKnown RBP21.2■□□□□ 0.98
ITSN1-209ENST00000399352 EIF4G2P78344 907 aaKnown RBP eCLIP21.19■□□□□ 0.98
ITSN1-209ENST00000399352 DEKP35659 375 aaKnown RBP21.13■□□□□ 0.97
ITSN1-209ENST00000399352 PPP4R2Q9NY27 417 aa21.11■□□□□ 0.97
ITSN1-209ENST00000399352 ABCC9O60706 1549 aa21.1■□□□□ 0.97
ITSN1-209ENST00000399352 RGS3P49796 1198 aa21.1■□□□□ 0.97
ITSN1-209ENST00000399352 ESF1Q9H501 851 aaKnown RBP21.1■□□□□ 0.97
ITSN1-209ENST00000399352 PLCB2Q00722 1185 aa21.07■□□□□ 0.96
ITSN1-209ENST00000399352 PLPPR3Q6T4P5 718 aa21.07■□□□□ 0.96
ITSN1-209ENST00000399352 B4GALNT3Q6L9W6 998 aa21.06■□□□□ 0.96
ITSN1-209ENST00000399352 ZRSR1Q15695 479 aaKnown RBP21.05■□□□□ 0.96
ITSN1-209ENST00000399352 AMER1Q5JTC6 1135 aaPredicted RBP21.02■□□□□ 0.96
ITSN1-209ENST00000399352 ARID4BQ4LE39 1312 aaPredicted RBP21.01■□□□□ 0.95
ITSN1-209ENST00000399352 RRP7BPQ9NSQ0 103 aa20.99■□□□□ 0.95
ITSN1-209ENST00000399352 RBM19Q9Y4C8 960 aaKnown RBP20.97■□□□□ 0.95
ITSN1-209ENST00000399352 SENP3Q9H4L4 574 aaPredicted RBP20.96■□□□□ 0.95
ITSN1-209ENST00000399352 FTSJ3Q8IY81 847 aaKnown RBP20.96■□□□□ 0.95
ITSN1-209ENST00000399352 TSPY4P0CV99 314 aa20.95■□□□□ 0.94
ITSN1-209ENST00000399352 TSPY10P0CW01 314 aa20.95■□□□□ 0.94
ITSN1-209ENST00000399352 CASC1Q6TDU7 716 aa20.94■□□□□ 0.94
ITSN1-209ENST00000399352 MTUS2Q5JR59 1369 aa20.94■□□□□ 0.94
ITSN1-209ENST00000399352 NEUROD2Q15784 382 aa20.93■□□□□ 0.94
ITSN1-209ENST00000399352 HSP90AB1P08238 724 aaKnown RBP20.92■□□□□ 0.94
ITSN1-209ENST00000399352 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.92■□□□□ 0.94
ITSN1-209ENST00000399352 FRAT1Q92837 279 aaPredicted RBP20.9■□□□□ 0.94
ITSN1-209ENST00000399352 PLEKHG5O94827 1062 aa20.88■□□□□ 0.93
ITSN1-209ENST00000399352 RGL3Q3MIN7 710 aa20.87■□□□□ 0.93
ITSN1-209ENST00000399352 CLIP1P30622 1438 aa20.86■□□□□ 0.93
ITSN1-209ENST00000399352 ZBTB7CA1YPR0 619 aa20.86■□□□□ 0.93
ITSN1-209ENST00000399352 MSNP26038 577 aaKnown RBP20.86■□□□□ 0.93
ITSN1-209ENST00000399352 SPRYD3Q8NCJ5 442 aa20.85■□□□□ 0.93
ITSN1-209ENST00000399352 MYO15BQ96JP2 1530 aa20.85■□□□□ 0.93
ITSN1-209ENST00000399352 A0A0G2JS52 829 aa20.85■□□□□ 0.93
ITSN1-209ENST00000399352 L1TD1Q5T7N2 865 aaKnown RBP20.85■□□□□ 0.93
ITSN1-209ENST00000399352 TAOK2Q9UL54 1235 aa20.85■□□□□ 0.93
ITSN1-209ENST00000399352 KNSTRNQ9Y448 316 aa20.85■□□□□ 0.93
ITSN1-209ENST00000399352 CFAP53Q96M91 514 aa20.83■□□□□ 0.93
ITSN1-209ENST00000399352 ARID3AQ99856 593 aa20.82■□□□□ 0.92
ITSN1-209ENST00000399352 CHAF1AQ13111 956 aaPredicted RBP20.8■□□□□ 0.92
ITSN1-209ENST00000399352 TULP1O00294 542 aaPredicted RBP20.79■□□□□ 0.92
ITSN1-209ENST00000399352 SIN3AQ96ST3 1273 aa20.79■□□□□ 0.92
ITSN1-209ENST00000399352 HSCBQ8IWL3 235 aa20.78■□□□□ 0.92
ITSN1-209ENST00000399352 GOLGA6L6A8MZA4 724 aa20.77■□□□□ 0.92
ITSN1-209ENST00000399352 CARD11Q9BXL7 1154 aa20.77■□□□□ 0.92
ITSN1-209ENST00000399352 C14orf37Q86TY3 774 aa20.77■□□□□ 0.92
ITSN1-209ENST00000399352 NRDCO43847 1150 aa20.73■□□□□ 0.91
ITSN1-209ENST00000399352 MAPK8IP3Q9UPT6 1336 aa20.71■□□□□ 0.91
ITSN1-209ENST00000399352 CC2D1BQ5T0F9 858 aaKnown RBP20.71■□□□□ 0.91
ITSN1-209ENST00000399352 GZF1Q9H116 711 aaPredicted RBP20.71■□□□□ 0.91
ITSN1-209ENST00000399352 CCDC180Q9P1Z9 1646 aa20.71■□□□□ 0.91
ITSN1-209ENST00000399352 PNNQ9H307 717 aaKnown RBP20.71■□□□□ 0.91
ITSN1-209ENST00000399352 CEP162Q5TB80 1403 aa20.7■□□□□ 0.9
ITSN1-209ENST00000399352 NPM1P06748 294 aaKnown RBP eCLIP20.7■□□□□ 0.9
ITSN1-209ENST00000399352 GOLGA6L4A6NEF3 574 aa20.69■□□□□ 0.9
ITSN1-209ENST00000399352 FGD1P98174 961 aa20.69■□□□□ 0.9
ITSN1-209ENST00000399352 TSHZ2Q9NRE2 1034 aa20.68■□□□□ 0.9
ITSN1-209ENST00000399352 CDCA8Q53HL2 280 aa20.68■□□□□ 0.9
ITSN1-209ENST00000399352 DRC7Q8IY82 874 aa20.67■□□□□ 0.9
ITSN1-209ENST00000399352 NAP1L2Q9ULW6 460 aaPredicted RBP20.66■□□□□ 0.9
ITSN1-209ENST00000399352 KCNJ4P48050 445 aa20.66■□□□□ 0.9
ITSN1-209ENST00000399352 SLKQ9H2G2 1235 aaPredicted RBP20.64■□□□□ 0.9
ITSN1-209ENST00000399352 PPP1R15AO75807 674 aaPredicted RBP20.62■□□□□ 0.89
ITSN1-209ENST00000399352 ZCCHC6Q5VYS8 1495 aaKnown RBP20.61■□□□□ 0.89
ITSN1-209ENST00000399352 OS9Q13438 667 aaPredicted RBP20.61■□□□□ 0.89
ITSN1-209ENST00000399352 NUDCQ9Y266 331 aa20.61■□□□□ 0.89
ITSN1-209ENST00000399352 MS4A1P11836 297 aa20.6■□□□□ 0.89
ITSN1-209ENST00000399352 CHMP4BQ9H444 224 aaKnown RBP20.58■□□□□ 0.89
ITSN1-209ENST00000399352 U2SURPO15042 1029 aaKnown RBP20.58■□□□□ 0.89
ITSN1-209ENST00000399352 CCER2I3L3R5 266 aa20.56■□□□□ 0.88
ITSN1-209ENST00000399352 SCRIBQ14160 1630 aa20.56■□□□□ 0.88
ITSN1-209ENST00000399352 KIAA2012Q0VF49 1180 aa20.55■□□□□ 0.88
ITSN1-209ENST00000399352 GOLGA3Q08378 1498 aa20.53■□□□□ 0.88
ITSN1-209ENST00000399352 GBP4Q96PP9 640 aa20.53■□□□□ 0.88
ITSN1-209ENST00000399352 RSF1Q96T23 1441 aaPredicted RBP20.53■□□□□ 0.88
ITSN1-209ENST00000399352 KCNH8Q96L42 1107 aa20.52■□□□□ 0.87
ITSN1-209ENST00000399352 TNNT3P45378 269 aaPredicted RBP20.51■□□□□ 0.87
ITSN1-209ENST00000399352 GOLGA6L3A6NEY3 463 aa20.5■□□□□ 0.87
ITSN1-209ENST00000399352 IPO9Q96P70 1041 aaKnown RBP20.5■□□□□ 0.87
ITSN1-209ENST00000399352 MCCP23508 829 aa20.5■□□□□ 0.87
ITSN1-209ENST00000399352 TCERG1O14776 1098 aaKnown RBP20.48■□□□□ 0.87
ITSN1-209ENST00000399352 APBB1O00213 710 aa20.47■□□□□ 0.87
ITSN1-209ENST00000399352 CFDP1Q9UEE9 299 aaPredicted RBP20.45■□□□□ 0.86
ITSN1-209ENST00000399352 PLEKHD1A6NEE1 506 aa20.44■□□□□ 0.86
ITSN1-209ENST00000399352 RCAN3Q9UKA8 241 aa20.44■□□□□ 0.86
ITSN1-209ENST00000399352 CHMP7Q8WUX9 453 aaPredicted RBP20.42■□□□□ 0.86
ITSN1-209ENST00000399352 HSP90AA2PQ14568 343 aaPredicted RBP20.42■□□□□ 0.86
ITSN1-209ENST00000399352 PTMSP20962 102 aa20.41■□□□□ 0.86
ITSN1-209ENST00000399352 HSPA5P11021 654 aaKnown RBP20.4■□□□□ 0.86
ITSN1-209ENST00000399352 POGKQ9P215 609 aa20.4■□□□□ 0.86
ITSN1-209ENST00000399352 TMF1P82094 1093 aa20.39■□□□□ 0.86
ITSN1-209ENST00000399352 VSIG10Q8N0Z9 540 aa20.39■□□□□ 0.86
ITSN1-209ENST00000399352 DCAF11Q8TEB1 546 aa20.38■□□□□ 0.85
ITSN1-209ENST00000399352 MFAP1P55081 439 aaKnown RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms