RNA–Protein interactions for RNA: ENST00000398631.2

PCDHA12-201, Transcript of protocadherin alpha 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA12, Length 5,233 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA12-201ENST00000398631 EIF4G2P78344 907 aaKnown RBP eCLIP21.73■■□□□ 1.07
PCDHA12-201ENST00000398631 KIF27Q86VH2 1401 aa21.7■■□□□ 1.07
PCDHA12-201ENST00000398631 PPP1R15AO75807 674 aaPredicted RBP21.7■■□□□ 1.06
PCDHA12-201ENST00000398631 CEP162Q5TB80 1403 aa21.68■■□□□ 1.06
PCDHA12-201ENST00000398631 CFDP1Q9UEE9 299 aaPredicted RBP21.67■■□□□ 1.06
PCDHA12-201ENST00000398631 CCDC136Q96JN2 1154 aa21.66■■□□□ 1.06
PCDHA12-201ENST00000398631 SCAF1Q9H7N4 1312 aaKnown RBP21.65■■□□□ 1.06
PCDHA12-201ENST00000398631 HIRIP3Q9BW71 556 aaPredicted RBP21.63■■□□□ 1.05
PCDHA12-201ENST00000398631 RGL3Q3MIN7 710 aa21.61■■□□□ 1.05
PCDHA12-201ENST00000398631 ANP32BQ92688 251 aaKnown RBP21.58■■□□□ 1.04
PCDHA12-201ENST00000398631 SENP3Q9H4L4 574 aaPredicted RBP21.57■■□□□ 1.04
PCDHA12-201ENST00000398631 CEP164Q9UPV0 1460 aa21.56■■□□□ 1.04
PCDHA12-201ENST00000398631 TNIKQ9UKE5 1360 aa21.55■■□□□ 1.04
PCDHA12-201ENST00000398631 C14orf37Q86TY3 774 aa21.55■■□□□ 1.04
PCDHA12-201ENST00000398631 ARID4BQ4LE39 1312 aaPredicted RBP21.54■■□□□ 1.04
PCDHA12-201ENST00000398631 ERCC6Q03468 1493 aa21.53■■□□□ 1.04
PCDHA12-201ENST00000398631 CDCA8Q53HL2 280 aa21.52■■□□□ 1.04
PCDHA12-201ENST00000398631 A0A0G2JS52 829 aa21.5■■□□□ 1.03
PCDHA12-201ENST00000398631 MYH16Q9H6N6 1097 aa21.5■■□□□ 1.03
PCDHA12-201ENST00000398631 MIER1Q8N108 512 aa21.5■■□□□ 1.03
PCDHA12-201ENST00000398631 ZBTB7CA1YPR0 619 aa21.49■■□□□ 1.03
PCDHA12-201ENST00000398631 BAZ1AQ9NRL2 1556 aaPredicted RBP21.48■■□□□ 1.03
PCDHA12-201ENST00000398631 PLEKHG5O94827 1062 aa21.47■■□□□ 1.03
PCDHA12-201ENST00000398631 CFAP53Q96M91 514 aa21.46■■□□□ 1.03
PCDHA12-201ENST00000398631 KNSTRNQ9Y448 316 aa21.43■■□□□ 1.02
PCDHA12-201ENST00000398631 CARD11Q9BXL7 1154 aa21.43■■□□□ 1.02
PCDHA12-201ENST00000398631 MYO15BQ96JP2 1530 aa21.39■■□□□ 1.01
PCDHA12-201ENST00000398631 IRX6P78412 446 aaPredicted RBP21.37■■□□□ 1.01
PCDHA12-201ENST00000398631 HAP1P54257 671 aaPredicted RBP21.36■■□□□ 1.01
PCDHA12-201ENST00000398631 CCNB3Q8WWL7 1395 aa21.36■■□□□ 1.01
PCDHA12-201ENST00000398631 FHAD1B1AJZ9 1412 aa21.36■■□□□ 1.01
PCDHA12-201ENST00000398631 CARMIL1Q5VZK9 1371 aa21.34■■□□□ 1.01
PCDHA12-201ENST00000398631 CECR2Q9BXF3 1484 aa21.33■■□□□ 1.01
PCDHA12-201ENST00000398631 PPM1GO15355 546 aaPredicted RBP21.33■■□□□ 1
PCDHA12-201ENST00000398631 POGKQ9P215 609 aa21.32■■□□□ 1
PCDHA12-201ENST00000398631 CUX2O14529 1486 aa21.31■■□□□ 1
PCDHA12-201ENST00000398631 SIN3AQ96ST3 1273 aa21.26■□□□□ 0.99
PCDHA12-201ENST00000398631 NUDCQ9Y266 331 aa21.26■□□□□ 0.99
PCDHA12-201ENST00000398631 MAPK8IP3Q9UPT6 1336 aa21.24■□□□□ 0.99
PCDHA12-201ENST00000398631 EIF4G1Q04637 1599 aaKnown RBP21.22■□□□□ 0.99
PCDHA12-201ENST00000398631 LMOD2Q6P5Q4 547 aa21.21■□□□□ 0.99
PCDHA12-201ENST00000398631 KANK1Q14678 1352 aa21.2■□□□□ 0.98
PCDHA12-201ENST00000398631 EIF5BO60841 1220 aaKnown RBP21.2■□□□□ 0.98
PCDHA12-201ENST00000398631 NEUROD2Q15784 382 aa21.2■□□□□ 0.98
PCDHA12-201ENST00000398631 SENP3-EIF4A1A0A087X0R7 540 aa21.18■□□□□ 0.98
PCDHA12-201ENST00000398631 NBR1Q14596 966 aa21.18■□□□□ 0.98
PCDHA12-201ENST00000398631 FTSJ3Q8IY81 847 aaKnown RBP21.17■□□□□ 0.98
PCDHA12-201ENST00000398631 ARXQ96QS3 562 aa21.17■□□□□ 0.98
PCDHA12-201ENST00000398631 SOGA1O94964 1423 aa21.17■□□□□ 0.98
PCDHA12-201ENST00000398631 BECN1Q14457 450 aa21.16■□□□□ 0.98
PCDHA12-201ENST00000398631 DCAF11Q8TEB1 546 aa21.15■□□□□ 0.98
PCDHA12-201ENST00000398631 HDGFP51858 240 aaKnown RBP21.15■□□□□ 0.98
PCDHA12-201ENST00000398631 GLIPR1L2Q4G1C9 344 aa21.14■□□□□ 0.98
PCDHA12-201ENST00000398631 TMF1P82094 1093 aa21.13■□□□□ 0.97
PCDHA12-201ENST00000398631 LAS1LQ9Y4W2 734 aaKnown RBP21.13■□□□□ 0.97
PCDHA12-201ENST00000398631 TRHP20396 242 aaPredicted RBP21.13■□□□□ 0.97
PCDHA12-201ENST00000398631 TIMELESSQ9UNS1 1208 aa21.12■□□□□ 0.97
PCDHA12-201ENST00000398631 TNNT2P45379 298 aaPredicted RBP21.12■□□□□ 0.97
PCDHA12-201ENST00000398631 DDRGK1Q96HY6 314 aa21.12■□□□□ 0.97
PCDHA12-201ENST00000398631 PDS5BQ9NTI5 1447 aa21.12■□□□□ 0.97
PCDHA12-201ENST00000398631 MLECQ14165 292 aa21.11■□□□□ 0.97
PCDHA12-201ENST00000398631 CARMIL2Q6F5E8 1435 aa21.11■□□□□ 0.97
PCDHA12-201ENST00000398631 SUPT16HQ9Y5B9 1047 aaKnown RBP21.09■□□□□ 0.97
PCDHA12-201ENST00000398631 CC2D1BQ5T0F9 858 aaKnown RBP21.08■□□□□ 0.97
PCDHA12-201ENST00000398631 U2SURPO15042 1029 aaKnown RBP21.08■□□□□ 0.97
PCDHA12-201ENST00000398631 NCLP19338 710 aaKnown RBP21.07■□□□□ 0.96
PCDHA12-201ENST00000398631 PNNQ9H307 717 aaKnown RBP21.06■□□□□ 0.96
PCDHA12-201ENST00000398631 GGT6Q6P531 493 aa21.05■□□□□ 0.96
PCDHA12-201ENST00000398631 CASC1Q6TDU7 716 aa21.05■□□□□ 0.96
PCDHA12-201ENST00000398631 CCDC88BA6NC98 1476 aa21.04■□□□□ 0.96
PCDHA12-201ENST00000398631 CHMP4BQ9H444 224 aaKnown RBP21.04■□□□□ 0.96
PCDHA12-201ENST00000398631 SMARCA2P51531 1590 aa21.04■□□□□ 0.96
PCDHA12-201ENST00000398631 VPS8Q8N3P4 1428 aa21.04■□□□□ 0.96
PCDHA12-201ENST00000398631 GOLGA6L22H0YM25 854 aa21.03■□□□□ 0.96
PCDHA12-201ENST00000398631 SRPK2P78362 688 aaKnown RBP21.03■□□□□ 0.96
PCDHA12-201ENST00000398631 FRAT1Q92837 279 aaPredicted RBP21.02■□□□□ 0.96
PCDHA12-201ENST00000398631 TDRD9Q8NDG6 1382 aaKnown RBP21.02■□□□□ 0.96
PCDHA12-201ENST00000398631 MROH2BQ7Z745 1585 aa21.02■□□□□ 0.96
PCDHA12-201ENST00000398631 ARHGAP35Q9NRY4 1499 aa21.02■□□□□ 0.96
PCDHA12-201ENST00000398631 MS4A1P11836 297 aa21.02■□□□□ 0.96
PCDHA12-201ENST00000398631 PKD2Q13563 968 aa21■□□□□ 0.95
PCDHA12-201ENST00000398631 SETD5Q9C0A6 1442 aa21■□□□□ 0.95
PCDHA12-201ENST00000398631 EFCAB2Q5VUJ9 269 aa21■□□□□ 0.95
PCDHA12-201ENST00000398631 CDK11BP21127 795 aaKnown RBP21■□□□□ 0.95
PCDHA12-201ENST00000398631 ANP32EQ9BTT0 268 aa21■□□□□ 0.95
PCDHA12-201ENST00000398631 FMN1Q68DA7 1419 aa20.96■□□□□ 0.95
PCDHA12-201ENST00000398631 SAFB2Q14151 953 aaKnown RBP eCLIP20.95■□□□□ 0.94
PCDHA12-201ENST00000398631 MORC1Q86VD1 984 aa20.95■□□□□ 0.94
PCDHA12-201ENST00000398631 PPP4R2Q9NY27 417 aa20.94■□□□□ 0.94
PCDHA12-201ENST00000398631 KANK4Q5T7N3 995 aaPredicted RBP20.93■□□□□ 0.94
PCDHA12-201ENST00000398631 NPHP1O15259 732 aa20.92■□□□□ 0.94
PCDHA12-201ENST00000398631 SOX12O15370 315 aa20.92■□□□□ 0.94
PCDHA12-201ENST00000398631 RGS3P49796 1198 aa20.92■□□□□ 0.94
PCDHA12-201ENST00000398631 OS9Q13438 667 aaPredicted RBP20.9■□□□□ 0.94
PCDHA12-201ENST00000398631 ABCC8Q09428 1581 aa20.9■□□□□ 0.94
PCDHA12-201ENST00000398631 STK26Q9P289 416 aa20.89■□□□□ 0.94
PCDHA12-201ENST00000398631 ZRSR1Q15695 479 aaKnown RBP20.89■□□□□ 0.93
PCDHA12-201ENST00000398631 HSPA5P11021 654 aaKnown RBP20.89■□□□□ 0.93
PCDHA12-201ENST00000398631 NUP155O75694 1391 aa20.88■□□□□ 0.93
PCDHA12-201ENST00000398631 ANKRD30AQ9BXX3 1397 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms