RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 SENP3-EIF4A1A0A087X0R7 540 aa15.52■□□□□ 0.07
TMF1-201ENST00000398559 SUPT16HQ9Y5B9 1047 aaKnown RBP15.51■□□□□ 0.07
TMF1-201ENST00000398559 MTUS2Q5JR59 1369 aa15.51■□□□□ 0.07
TMF1-201ENST00000398559 CDK11BP21127 795 aaKnown RBP15.51■□□□□ 0.07
TMF1-201ENST00000398559 TSPY4P0CV99 314 aa15.5■□□□□ 0.07
TMF1-201ENST00000398559 TSPY10P0CW01 314 aa15.5■□□□□ 0.07
TMF1-201ENST00000398559 PTMAP06454 111 aaKnown RBP15.48■□□□□ 0.07
TMF1-201ENST00000398559 RRP7BPQ9NSQ0 103 aa15.47■□□□□ 0.07
TMF1-201ENST00000398559 RTN4Q9NQC3 1192 aaKnown RBP15.47■□□□□ 0.07
TMF1-201ENST00000398559 TNNT2P45379 298 aaPredicted RBP15.46■□□□□ 0.07
TMF1-201ENST00000398559 LAS1LQ9Y4W2 734 aaKnown RBP15.46■□□□□ 0.06
TMF1-201ENST00000398559 PPM1GO15355 546 aaPredicted RBP15.45■□□□□ 0.06
TMF1-201ENST00000398559 NPM1P06748 294 aaKnown RBP eCLIP15.45■□□□□ 0.06
TMF1-201ENST00000398559 CLIP1P30622 1438 aa15.45■□□□□ 0.06
TMF1-201ENST00000398559 TPRNQ4KMQ1 711 aa15.44■□□□□ 0.06
TMF1-201ENST00000398559 DNTTIP2Q5QJE6 756 aaKnown RBP15.44■□□□□ 0.06
TMF1-201ENST00000398559 NAP1L5Q96NT1 182 aaPredicted RBP15.43■□□□□ 0.06
TMF1-201ENST00000398559 SENP3Q9H4L4 574 aaPredicted RBP15.43■□□□□ 0.06
TMF1-201ENST00000398559 ERICH6BQ5W0A0 696 aa15.42■□□□□ 0.06
TMF1-201ENST00000398559 ZBTB7CA1YPR0 619 aa15.41■□□□□ 0.06
TMF1-201ENST00000398559 NOP58Q9Y2X3 529 aaKnown RBP15.4■□□□□ 0.06
TMF1-201ENST00000398559 MYO15BQ96JP2 1530 aa15.39■□□□□ 0.05
TMF1-201ENST00000398559 CASC1Q6TDU7 716 aa15.39■□□□□ 0.05
TMF1-201ENST00000398559 PPP4R2Q9NY27 417 aa15.38■□□□□ 0.05
TMF1-201ENST00000398559 FTSJ3Q8IY81 847 aaKnown RBP15.38■□□□□ 0.05
TMF1-201ENST00000398559 A0A0G2JS52 829 aa15.38■□□□□ 0.05
TMF1-201ENST00000398559 ZRSR1Q15695 479 aaKnown RBP15.38■□□□□ 0.05
TMF1-201ENST00000398559 CCDC180Q9P1Z9 1646 aa15.37■□□□□ 0.05
TMF1-201ENST00000398559 PLEKHG5O94827 1062 aa15.37■□□□□ 0.05
TMF1-201ENST00000398559 RGL3Q3MIN7 710 aa15.36■□□□□ 0.05
TMF1-201ENST00000398559 RGS3P49796 1198 aa15.35■□□□□ 0.05
TMF1-201ENST00000398559 C14orf37Q86TY3 774 aa15.35■□□□□ 0.05
TMF1-201ENST00000398559 CFAP53Q96M91 514 aa15.35■□□□□ 0.05
TMF1-201ENST00000398559 KNSTRNQ9Y448 316 aa15.34■□□□□ 0.05
TMF1-201ENST00000398559 CEP162Q5TB80 1403 aa15.33■□□□□ 0.04
TMF1-201ENST00000398559 NEUROD2Q15784 382 aa15.31■□□□□ 0.04
TMF1-201ENST00000398559 ZCCHC6Q5VYS8 1495 aaKnown RBP15.31■□□□□ 0.04
TMF1-201ENST00000398559 PLCB2Q00722 1185 aa15.3■□□□□ 0.04
TMF1-201ENST00000398559 GOLGA3Q08378 1498 aa15.3■□□□□ 0.04
TMF1-201ENST00000398559 B4GALNT3Q6L9W6 998 aa15.29■□□□□ 0.04
TMF1-201ENST00000398559 CARD11Q9BXL7 1154 aa15.29■□□□□ 0.04
TMF1-201ENST00000398559 RSF1Q96T23 1441 aaPredicted RBP15.29■□□□□ 0.04
TMF1-201ENST00000398559 HSP90AB1P08238 724 aaKnown RBP15.29■□□□□ 0.04
TMF1-201ENST00000398559 PPP1R15AO75807 674 aaPredicted RBP15.28■□□□□ 0.04
TMF1-201ENST00000398559 FRAT1Q92837 279 aaPredicted RBP15.28■□□□□ 0.04
TMF1-201ENST00000398559 CDCA8Q53HL2 280 aa15.27■□□□□ 0.04
TMF1-201ENST00000398559 CHMP7Q8WUX9 453 aaPredicted RBP15.25■□□□□ 0.03
TMF1-201ENST00000398559 MAPK8IP3Q9UPT6 1336 aa15.24■□□□□ 0.03
TMF1-201ENST00000398559 SIN3AQ96ST3 1273 aa15.24■□□□□ 0.03
TMF1-201ENST00000398559 DEKP35659 375 aaKnown RBP15.23■□□□□ 0.03
TMF1-201ENST00000398559 KCNH8Q96L42 1107 aa15.23■□□□□ 0.03
TMF1-201ENST00000398559 CC2D1BQ5T0F9 858 aaKnown RBP15.22■□□□□ 0.03
TMF1-201ENST00000398559 TAOK2Q9UL54 1235 aa15.22■□□□□ 0.03
TMF1-201ENST00000398559 TULP1O00294 542 aaPredicted RBP15.21■□□□□ 0.03
TMF1-201ENST00000398559 GOLGA6L6A8MZA4 724 aa15.2■□□□□ 0.02
TMF1-201ENST00000398559 PLEKHD1A6NEE1 506 aa15.18■□□□□ 0.02
TMF1-201ENST00000398559 EEA1Q15075 1411 aa15.18■□□□□ 0.02
TMF1-201ENST00000398559 HSCBQ8IWL3 235 aa15.18■□□□□ 0.02
TMF1-201ENST00000398559 NUDCQ9Y266 331 aa15.18■□□□□ 0.02
TMF1-201ENST00000398559 SPRYD3Q8NCJ5 442 aa15.17■□□□□ 0.02
TMF1-201ENST00000398559 L1TD1Q5T7N2 865 aaKnown RBP15.16■□□□□ 0.02
TMF1-201ENST00000398559 RBM19Q9Y4C8 960 aaKnown RBP15.16■□□□□ 0.02
TMF1-201ENST00000398559 MSNP26038 577 aaKnown RBP15.16■□□□□ 0.02
TMF1-201ENST00000398559 CFDP1Q9UEE9 299 aaPredicted RBP15.15■□□□□ 0.02
TMF1-201ENST00000398559 CHMP4BQ9H444 224 aaKnown RBP15.15■□□□□ 0.02
TMF1-201ENST00000398559 MS4A1P11836 297 aa15.14■□□□□ 0.01
TMF1-201ENST00000398559 OS9Q13438 667 aaPredicted RBP15.14■□□□□ 0.01
TMF1-201ENST00000398559 FGD1P98174 961 aa15.14■□□□□ 0.01
TMF1-201ENST00000398559 CHAF1AQ13111 956 aaPredicted RBP15.13■□□□□ 0.01
TMF1-201ENST00000398559 NAP1L2Q9ULW6 460 aaPredicted RBP15.13■□□□□ 0.01
TMF1-201ENST00000398559 U2SURPO15042 1029 aaKnown RBP15.12■□□□□ 0.01
TMF1-201ENST00000398559 KCNJ4P48050 445 aa15.12■□□□□ 0.01
TMF1-201ENST00000398559 NRDCO43847 1150 aa15.11■□□□□ 0.01
TMF1-201ENST00000398559 TNIKQ9UKE5 1360 aa15.11■□□□□ 0.01
TMF1-201ENST00000398559 HAP1P54257 671 aaPredicted RBP15.1■□□□□ 0.01
TMF1-201ENST00000398559 ARID4BQ4LE39 1312 aaPredicted RBP15.1■□□□□ 0.01
TMF1-201ENST00000398559 GOLGA6L4A6NEF3 574 aa15.1■□□□□ 0.01
TMF1-201ENST00000398559 POGKQ9P215 609 aa15.09■□□□□ 0.01
TMF1-201ENST00000398559 CEP164Q9UPV0 1460 aa15.08■□□□□ 0
TMF1-201ENST00000398559 DRC7Q8IY82 874 aa15.07■□□□□ 0
TMF1-201ENST00000398559 AMER1Q5JTC6 1135 aaPredicted RBP15.07■□□□□ 0
TMF1-201ENST00000398559 CCER2I3L3R5 266 aa15.06■□□□□ 0
TMF1-201ENST00000398559 PNNQ9H307 717 aaKnown RBP15.06■□□□□ 0
TMF1-201ENST00000398559 WRNQ14191 1432 aaPredicted RBP eCLIP15.05■□□□□ 0
TMF1-201ENST00000398559 TMF1P82094 1093 aa15.05■□□□□ 0
TMF1-201ENST00000398559 MCCP23508 829 aa15.04■□□□□ -0
TMF1-201ENST00000398559 DCAF11Q8TEB1 546 aa15.02■□□□□ -0
TMF1-201ENST00000398559 KIF27Q86VH2 1401 aa15.02□□□□□ -0.01
TMF1-201ENST00000398559 LMOD2Q6P5Q4 547 aa15.01□□□□□ -0.01
TMF1-201ENST00000398559 CCNB3Q8WWL7 1395 aa15.01□□□□□ -0.01
TMF1-201ENST00000398559 GZF1Q9H116 711 aaPredicted RBP15.01□□□□□ -0.01
TMF1-201ENST00000398559 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.99□□□□□ -0.01
TMF1-201ENST00000398559 HSPA5P11021 654 aaKnown RBP14.99□□□□□ -0.01
TMF1-201ENST00000398559 ARID3AQ99856 593 aa14.99□□□□□ -0.01
TMF1-201ENST00000398559 GBP4Q96PP9 640 aa14.97□□□□□ -0.01
TMF1-201ENST00000398559 NPHP1O15259 732 aa14.97□□□□□ -0.01
TMF1-201ENST00000398559 MORC1Q86VD1 984 aa14.97□□□□□ -0.01
TMF1-201ENST00000398559 SLKQ9H2G2 1235 aaPredicted RBP14.97□□□□□ -0.01
TMF1-201ENST00000398559 GOLGA2Q08379 1002 aa14.97□□□□□ -0.01
TMF1-201ENST00000398559 CFAP44Q96MT7 982 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms