RNA–Protein interactions for RNA: ENST00000398455.3

HIGD1C-201, Transcript of HIG1 hypoxia inducible domain family member 1C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIGD1C, Length 371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1C-201ENST00000398455 ATMINO43313 823 aaPredicted RBP11.74□□□□□ -0.53
HIGD1C-201ENST00000398455 ASTLQ6HA08 431 aaPredicted RBP11.74□□□□□ -0.53
HIGD1C-201ENST00000398455 CDAN1Q8IWY9 1227 aa11.74□□□□□ -0.53
HIGD1C-201ENST00000398455 SCUBE2Q9NQ36 999 aa11.71□□□□□ -0.53
HIGD1C-201ENST00000398455 MS4A3Q96HJ5 214 aa11.69□□□□□ -0.54
HIGD1C-201ENST00000398455 ATN1P54259 1190 aaPredicted RBP11.6□□□□□ -0.55
HIGD1C-201ENST00000398455 POTEFA5A3E0 1075 aa11.58□□□□□ -0.56
HIGD1C-201ENST00000398455 STAG3Q9UJ98 1225 aa11.54□□□□□ -0.56
HIGD1C-201ENST00000398455 NPM1P06748 294 aaKnown RBP eCLIP11.53□□□□□ -0.56
HIGD1C-201ENST00000398455 MMRN1Q13201 1228 aa11.53□□□□□ -0.56
HIGD1C-201ENST00000398455 MNX1P50219 401 aaPredicted RBP11.51□□□□□ -0.57
HIGD1C-201ENST00000398455 EHMT2Q96KQ7 1210 aa11.51□□□□□ -0.57
HIGD1C-201ENST00000398455 SPNS2Q8IVW8 549 aa11.46□□□□□ -0.57
HIGD1C-201ENST00000398455 ST18O60284 1047 aa11.45□□□□□ -0.58
HIGD1C-201ENST00000398455 TRPC6Q9Y210 931 aa11.43□□□□□ -0.58
HIGD1C-201ENST00000398455 TSPYL2Q9H2G4 693 aaPredicted RBP11.42□□□□□ -0.58
HIGD1C-201ENST00000398455 BMP2KQ9NSY1 1161 aaPredicted RBP11.42□□□□□ -0.58
HIGD1C-201ENST00000398455 COLQQ9Y215 455 aaPredicted RBP11.42□□□□□ -0.58
HIGD1C-201ENST00000398455 SEC24BO95487 1268 aa11.37□□□□□ -0.59
HIGD1C-201ENST00000398455 SLAIN1Q8ND83 568 aa11.34□□□□□ -0.59
HIGD1C-201ENST00000398455 KIF12Q96FN5 646 aa11.33□□□□□ -0.6
HIGD1C-201ENST00000398455 CCDC61Q9Y6R9 512 aa11.33□□□□□ -0.6
HIGD1C-201ENST00000398455 CSRNP3Q8WYN3 585 aa11.3□□□□□ -0.6
HIGD1C-201ENST00000398455 TIE1P35590 1138 aa11.26□□□□□ -0.61
HIGD1C-201ENST00000398455 MAP3K13O43283 966 aa11.25□□□□□ -0.61
HIGD1C-201ENST00000398455 TTLL13PA6NNM8 815 aa11.23□□□□□ -0.61
HIGD1C-201ENST00000398455 SPDYE4A6NLX3 237 aa11.21□□□□□ -0.61
HIGD1C-201ENST00000398455 MARVELD3Q96A59 401 aa11.21□□□□□ -0.61
HIGD1C-201ENST00000398455 TRIM35Q9UPQ4 493 aa11.18□□□□□ -0.62
HIGD1C-201ENST00000398455 TMEM121BQ9BXQ6 578 aaPredicted RBP11.13□□□□□ -0.63
HIGD1C-201ENST00000398455 IER5LQ5T953 404 aa11.12□□□□□ -0.63
HIGD1C-201ENST00000398455 PLCG2P16885 1265 aa11.04□□□□□ -0.64
HIGD1C-201ENST00000398455 RASEFQ8IZ41 740 aa11.04□□□□□ -0.64
HIGD1C-201ENST00000398455 KRTAP3-3Q9BYR6 98 aa11.04□□□□□ -0.64
HIGD1C-201ENST00000398455 KRTAP3-2Q9BYR7 98 aa11.04□□□□□ -0.64
HIGD1C-201ENST00000398455 SNPHO15079 494 aa11.02□□□□□ -0.65
HIGD1C-201ENST00000398455 POTEB3A0JP26 581 aa11.01□□□□□ -0.65
HIGD1C-201ENST00000398455 POTEBQ6S5H4 581 aa11.01□□□□□ -0.65
HIGD1C-201ENST00000398455 EMP3P54852 163 aa10.99□□□□□ -0.65
HIGD1C-201ENST00000398455 PCDHB13Q9Y5F0 798 aa10.99□□□□□ -0.65
HIGD1C-201ENST00000398455 IRX5P78411 483 aaPredicted RBP10.96□□□□□ -0.65
HIGD1C-201ENST00000398455 HS3ST6Q96QI5 342 aa10.95□□□□□ -0.66
HIGD1C-201ENST00000398455 TMEM106CQ9BVX2 250 aa10.95□□□□□ -0.66
HIGD1C-201ENST00000398455 FAM205CA6NFA0 338 aa10.94□□□□□ -0.66
HIGD1C-201ENST00000398455 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.94□□□□□ -0.66
HIGD1C-201ENST00000398455 IFNL1Q8IU54 200 aa10.92□□□□□ -0.66
HIGD1C-201ENST00000398455 SGIP1Q9BQI5 828 aa10.9□□□□□ -0.66
HIGD1C-201ENST00000398455 OCEL1Q9H607 264 aa10.88□□□□□ -0.67
HIGD1C-201ENST00000398455 MIER1Q8N108 512 aa10.84□□□□□ -0.67
HIGD1C-201ENST00000398455 PLEKHG5O94827 1062 aa10.79□□□□□ -0.68
HIGD1C-201ENST00000398455 RNF166Q96A37 237 aaPredicted RBP10.79□□□□□ -0.68
HIGD1C-201ENST00000398455 C3orf67Q6ZVT6 689 aa10.73□□□□□ -0.69
HIGD1C-201ENST00000398455 PROM2Q8N271 834 aa10.71□□□□□ -0.69
HIGD1C-201ENST00000398455 NUBP1P53384 320 aa10.69□□□□□ -0.7
HIGD1C-201ENST00000398455 PDCD7Q8N8D1 485 aaKnown RBP10.66□□□□□ -0.7
HIGD1C-201ENST00000398455 MYT1LQ9UL68 1186 aa10.66□□□□□ -0.7
HIGD1C-201ENST00000398455 PLCD3Q8N3E9 789 aa10.62□□□□□ -0.71
HIGD1C-201ENST00000398455 L3MBTL3Q96JM7 780 aaPredicted RBP10.61□□□□□ -0.71
HIGD1C-201ENST00000398455 PCDHB8Q9UN66 801 aa10.61□□□□□ -0.71
HIGD1C-201ENST00000398455 ERBB3P21860 1342 aa10.6□□□□□ -0.71
HIGD1C-201ENST00000398455 FAM212AQ96EL1 285 aa10.59□□□□□ -0.71
HIGD1C-201ENST00000398455 PYGBP11216 843 aa10.57□□□□□ -0.72
HIGD1C-201ENST00000398455 HOXB3P14651 431 aaPredicted RBP10.57□□□□□ -0.72
HIGD1C-201ENST00000398455 HOXB1P14653 301 aaPredicted RBP10.54□□□□□ -0.72
HIGD1C-201ENST00000398455 VARS2Q5ST30 1063 aaKnown RBP10.52□□□□□ -0.73
HIGD1C-201ENST00000398455 ZNF710Q8N1W2 664 aa10.52□□□□□ -0.73
HIGD1C-201ENST00000398455 MKRN3Q13064 507 aaKnown RBP10.51□□□□□ -0.73
HIGD1C-201ENST00000398455 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.5□□□□□ -0.73
HIGD1C-201ENST00000398455 GOLGA2Q08379 1002 aa10.48□□□□□ -0.73
HIGD1C-201ENST00000398455 DCAF8Q5TAQ9 597 aa10.48□□□□□ -0.73
HIGD1C-201ENST00000398455 ZBTB47Q9UFB7 747 aaPredicted RBP10.48□□□□□ -0.73
HIGD1C-201ENST00000398455 DPY19L2Q6NUT2 758 aa10.47□□□□□ -0.73
HIGD1C-201ENST00000398455 ZNF687Q8N1G0 1237 aa10.41□□□□□ -0.74
HIGD1C-201ENST00000398455 DOK7Q18PE1 504 aa10.4□□□□□ -0.74
HIGD1C-201ENST00000398455 ANKRD13DQ6ZTN6 518 aa10.4□□□□□ -0.74
HIGD1C-201ENST00000398455 PLA2G2EQ9NZK7 142 aa10.39□□□□□ -0.75
HIGD1C-201ENST00000398455 PTGER2P43116 358 aa10.36□□□□□ -0.75
HIGD1C-201ENST00000398455 BOLA1Q9Y3E2 137 aa10.35□□□□□ -0.75
HIGD1C-201ENST00000398455 G3V3G9 751 aa10.34□□□□□ -0.75
HIGD1C-201ENST00000398455 ILDR1Q86SU0 546 aaPredicted RBP10.32□□□□□ -0.76
HIGD1C-201ENST00000398455 RIMBP2O15034 1052 aa10.31□□□□□ -0.76
HIGD1C-201ENST00000398455 PSEN1P49768 467 aa10.29□□□□□ -0.76
HIGD1C-201ENST00000398455 ZNF467Q7Z7K2 595 aaPredicted RBP10.28□□□□□ -0.76
HIGD1C-201ENST00000398455 GPR153Q6NV75 609 aa10.24□□□□□ -0.77
HIGD1C-201ENST00000398455 LSM11P83369 360 aaKnown RBP eCLIP10.21□□□□□ -0.77
HIGD1C-201ENST00000398455 FKBP8Q14318 412 aa10.21□□□□□ -0.77
HIGD1C-201ENST00000398455 CABP2Q9NPB3 220 aa10.2□□□□□ -0.78
HIGD1C-201ENST00000398455 ZSWIM6Q9HCJ5 1215 aa10.19□□□□□ -0.78
HIGD1C-201ENST00000398455 HCSTQ9UBK5 93 aa10.18□□□□□ -0.78
HIGD1C-201ENST00000398455 ARSIQ5FYB1 569 aa10.17□□□□□ -0.78
HIGD1C-201ENST00000398455 TMEM92Q6UXU6 159 aa10.16□□□□□ -0.78
HIGD1C-201ENST00000398455 KHSRPQ92945 711 aaKnown RBP eCLIP10.15□□□□□ -0.78
HIGD1C-201ENST00000398455 ZNF316A6NFI3 1004 aaPredicted RBP10.12□□□□□ -0.79
HIGD1C-201ENST00000398455 PDAP1Q13442 181 aaKnown RBP10.1□□□□□ -0.79
HIGD1C-201ENST00000398455 GSE1Q14687 1217 aa10.09□□□□□ -0.79
HIGD1C-201ENST00000398455 AXIN2Q9Y2T1 843 aa10.09□□□□□ -0.79
HIGD1C-201ENST00000398455 CHRM1P11229 460 aaPredicted RBP10.08□□□□□ -0.8
HIGD1C-201ENST00000398455 POTEEQ6S8J3 1075 aa10.07□□□□□ -0.8
HIGD1C-201ENST00000398455 IRX2Q9BZI1 471 aaPredicted RBP10.07□□□□□ -0.8
HIGD1C-201ENST00000398455 MICALL2Q8IY33 904 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms