RNA–Protein interactions for RNA: ENST00000396356.7

SOX6-202, Transcript of SRY-box 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SOX6, Length 8,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-202ENST00000396356 CFAP53Q96M91 514 aa10.62□□□□□ -0.71
SOX6-202ENST00000396356 MTUS2Q5JR59 1369 aa10.62□□□□□ -0.71
SOX6-202ENST00000396356 TSPY4P0CV99 314 aa10.62□□□□□ -0.71
SOX6-202ENST00000396356 TSPY10P0CW01 314 aa10.62□□□□□ -0.71
SOX6-202ENST00000396356 TMC1Q8TDI8 760 aa10.62□□□□□ -0.71
SOX6-202ENST00000396356 BAZ1AQ9NRL2 1556 aaPredicted RBP10.61□□□□□ -0.71
SOX6-202ENST00000396356 ZNF326Q5BKZ1 582 aaKnown RBP10.6□□□□□ -0.71
SOX6-202ENST00000396356 NPM2Q86SE8 214 aaKnown RBP10.6□□□□□ -0.71
SOX6-202ENST00000396356 LOC105371045A0A1W2PR82 267 aa10.59□□□□□ -0.71
SOX6-202ENST00000396356 ANO8Q9HCE9 1232 aaPredicted RBP10.59□□□□□ -0.71
SOX6-202ENST00000396356 KIF27Q86VH2 1401 aa10.57□□□□□ -0.72
SOX6-202ENST00000396356 MYO15BQ96JP2 1530 aa10.57□□□□□ -0.72
SOX6-202ENST00000396356 CHAF1AQ13111 956 aaPredicted RBP10.57□□□□□ -0.72
SOX6-202ENST00000396356 EIF4G2P78344 907 aaKnown RBP eCLIP10.56□□□□□ -0.72
SOX6-202ENST00000396356 STAG3Q9UJ98 1225 aa10.55□□□□□ -0.72
SOX6-202ENST00000396356 HDAC5Q9UQL6 1122 aa10.54□□□□□ -0.72
SOX6-202ENST00000396356 HNRNPUQ00839 825 aaKnown RBP eCLIP10.54□□□□□ -0.72
SOX6-202ENST00000396356 PPARGC1BQ86YN6 1023 aaKnown RBP10.54□□□□□ -0.72
SOX6-202ENST00000396356 BCANQ96GW7 911 aa10.53□□□□□ -0.72
SOX6-202ENST00000396356 CHMP4CQ96CF2 233 aa10.52□□□□□ -0.73
SOX6-202ENST00000396356 CCDC34Q96HJ3 373 aa10.52□□□□□ -0.73
SOX6-202ENST00000396356 PHLDB1Q86UU1 1377 aa10.51□□□□□ -0.73
SOX6-202ENST00000396356 TNIKQ9UKE5 1360 aa10.49□□□□□ -0.73
SOX6-202ENST00000396356 CALD1Q05682 793 aaKnown RBP10.49□□□□□ -0.73
SOX6-202ENST00000396356 NUDCQ9Y266 331 aa10.48□□□□□ -0.73
SOX6-202ENST00000396356 HDGFP51858 240 aaKnown RBP10.48□□□□□ -0.73
SOX6-202ENST00000396356 HTATSF1O43719 755 aaKnown RBP10.48□□□□□ -0.73
SOX6-202ENST00000396356 SMARCA2P51531 1590 aa10.48□□□□□ -0.73
SOX6-202ENST00000396356 MRS2Q9HD23 443 aa10.48□□□□□ -0.73
SOX6-202ENST00000396356 BAZ1BQ9UIG0 1483 aaKnown RBP10.48□□□□□ -0.73
SOX6-202ENST00000396356 KANK1Q14678 1352 aa10.47□□□□□ -0.73
SOX6-202ENST00000396356 EIF3AQ14152 1382 aaKnown RBP10.46□□□□□ -0.74
SOX6-202ENST00000396356 FKBP8Q14318 412 aa10.46□□□□□ -0.74
SOX6-202ENST00000396356 ROCK2O75116 1388 aaKnown RBP10.45□□□□□ -0.74
SOX6-202ENST00000396356 MCCP23508 829 aa10.45□□□□□ -0.74
SOX6-202ENST00000396356 KNSTRNQ9Y448 316 aa10.45□□□□□ -0.74
SOX6-202ENST00000396356 SYAP1Q96A49 352 aaPredicted RBP10.43□□□□□ -0.74
SOX6-202ENST00000396356 WRNQ14191 1432 aaPredicted RBP eCLIP10.43□□□□□ -0.74
SOX6-202ENST00000396356 CCER2I3L3R5 266 aa10.42□□□□□ -0.74
SOX6-202ENST00000396356 NGEFQ8N5V2 710 aa10.42□□□□□ -0.74
SOX6-202ENST00000396356 PTMAP06454 111 aaKnown RBP10.42□□□□□ -0.74
SOX6-202ENST00000396356 FBLN2P98095 1184 aa10.41□□□□□ -0.74
SOX6-202ENST00000396356 FTSJ3Q8IY81 847 aaKnown RBP10.41□□□□□ -0.74
SOX6-202ENST00000396356 CSPP1Q1MSJ5 1256 aa10.39□□□□□ -0.75
SOX6-202ENST00000396356 FMN1Q68DA7 1419 aa10.39□□□□□ -0.75
SOX6-202ENST00000396356 PPP4R2Q9NY27 417 aa10.39□□□□□ -0.75
SOX6-202ENST00000396356 PLEKHD1A6NEE1 506 aa10.39□□□□□ -0.75
SOX6-202ENST00000396356 MAPK8IP3Q9UPT6 1336 aa10.39□□□□□ -0.75
SOX6-202ENST00000396356 WWC1Q8IX03 1113 aa10.39□□□□□ -0.75
SOX6-202ENST00000396356 ZNF777Q9ULD5 760 aaPredicted RBP10.38□□□□□ -0.75
SOX6-202ENST00000396356 IPO8O15397 1037 aaKnown RBP10.36□□□□□ -0.75
SOX6-202ENST00000396356 PHF14O94880 888 aa10.36□□□□□ -0.75
SOX6-202ENST00000396356 CNGB1Q14028 1251 aaPredicted RBP10.36□□□□□ -0.75
SOX6-202ENST00000396356 KIAA2012Q0VF49 1180 aa10.36□□□□□ -0.75
SOX6-202ENST00000396356 KIF3AQ9Y496 699 aa10.36□□□□□ -0.75
SOX6-202ENST00000396356 AAMPQ13685 434 aa10.35□□□□□ -0.75
SOX6-202ENST00000396356 GBP4Q96PP9 640 aa10.35□□□□□ -0.75
SOX6-202ENST00000396356 ARHGAP35Q9NRY4 1499 aa10.35□□□□□ -0.75
SOX6-202ENST00000396356 RSPH4AQ5TD94 716 aa10.34□□□□□ -0.75
SOX6-202ENST00000396356 HSCBQ8IWL3 235 aa10.33□□□□□ -0.76
SOX6-202ENST00000396356 PPP1R15AO75807 674 aaPredicted RBP10.33□□□□□ -0.76
SOX6-202ENST00000396356 CHMP7Q8WUX9 453 aaPredicted RBP10.33□□□□□ -0.76
SOX6-202ENST00000396356 MSNP26038 577 aaKnown RBP10.32□□□□□ -0.76
SOX6-202ENST00000396356 GOLGA6L4A6NEF3 574 aa10.32□□□□□ -0.76
SOX6-202ENST00000396356 DNTTIP2Q5QJE6 756 aaKnown RBP10.32□□□□□ -0.76
SOX6-202ENST00000396356 FAM9BQ8IZU0 186 aa10.32□□□□□ -0.76
SOX6-202ENST00000396356 TPM4P67936 248 aa10.32□□□□□ -0.76
SOX6-202ENST00000396356 UACAQ9BZF9 1416 aa10.32□□□□□ -0.76
SOX6-202ENST00000396356 ABCC8Q09428 1581 aa10.32□□□□□ -0.76
SOX6-202ENST00000396356 CARMIL2Q6F5E8 1435 aa10.31□□□□□ -0.76
SOX6-202ENST00000396356 GOLGA6L1Q8N7Z2 621 aa10.31□□□□□ -0.76
SOX6-202ENST00000396356 CCNB3Q8WWL7 1395 aa10.31□□□□□ -0.76
SOX6-202ENST00000396356 RALBP1Q15311 655 aa10.3□□□□□ -0.76
SOX6-202ENST00000396356 PDE3BQ13370 1112 aa10.3□□□□□ -0.76
SOX6-202ENST00000396356 DDX10Q13206 875 aaKnown RBP10.29□□□□□ -0.76
SOX6-202ENST00000396356 STAC3Q96MF2 364 aa10.29□□□□□ -0.76
SOX6-202ENST00000396356 VPS8Q8N3P4 1428 aa10.29□□□□□ -0.76
SOX6-202ENST00000396356 NOP58Q9Y2X3 529 aaKnown RBP10.29□□□□□ -0.76
SOX6-202ENST00000396356 SCAPERQ9BY12 1400 aa10.28□□□□□ -0.76
SOX6-202ENST00000396356 SCAF1Q9H7N4 1312 aaKnown RBP10.28□□□□□ -0.76
SOX6-202ENST00000396356 PABPN1Q86U42 306 aaKnown RBP eCLIP10.28□□□□□ -0.76
SOX6-202ENST00000396356 TMF1P82094 1093 aa10.27□□□□□ -0.76
SOX6-202ENST00000396356 KTN1Q86UP2 1357 aaKnown RBP10.27□□□□□ -0.76
SOX6-202ENST00000396356 GPATCH3Q96I76 525 aa10.27□□□□□ -0.77
SOX6-202ENST00000396356 CFDP1Q9UEE9 299 aaPredicted RBP10.27□□□□□ -0.77
SOX6-202ENST00000396356 DHX8Q14562 1220 aaKnown RBP10.27□□□□□ -0.77
SOX6-202ENST00000396356 ATP6V1DQ9Y5K8 247 aa10.27□□□□□ -0.77
SOX6-202ENST00000396356 CCDC18Q5T9S5 1454 aa10.26□□□□□ -0.77
SOX6-202ENST00000396356 LMOD3Q0VAK6 560 aa10.26□□□□□ -0.77
SOX6-202ENST00000396356 TCERG1O14776 1098 aaKnown RBP10.25□□□□□ -0.77
SOX6-202ENST00000396356 FGD1P98174 961 aa10.24□□□□□ -0.77
SOX6-202ENST00000396356 LRRFIP1Q32MZ4 808 aaKnown RBP10.24□□□□□ -0.77
SOX6-202ENST00000396356 HSP90AB1P08238 724 aaKnown RBP10.24□□□□□ -0.77
SOX6-202ENST00000396356 HMMRO75330 724 aa10.24□□□□□ -0.77
SOX6-202ENST00000396356 CHGAP10645 457 aaKnown RBP10.24□□□□□ -0.77
SOX6-202ENST00000396356 AEBP2Q6ZN18 517 aaPredicted RBP10.23□□□□□ -0.77
SOX6-202ENST00000396356 KIAA1211Q6ZU35 1233 aa10.23□□□□□ -0.77
SOX6-202ENST00000396356 SETD5Q9C0A6 1442 aa10.23□□□□□ -0.77
SOX6-202ENST00000396356 CUX1P39880 1505 aa10.22□□□□□ -0.77
SOX6-202ENST00000396356 SKOR2Q2VWA4 1001 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms