RNA–Protein interactions for RNA: ENST00000395035.3

CDKL4-202, Transcript of cyclin dependent kinase like 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDKL4, Length 1,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL4-202ENST00000395035 C7P10643 843 aa13.36□□□□□ -0.27
CDKL4-202ENST00000395035 SLC39A7Q92504 469 aa13.36□□□□□ -0.27
CDKL4-202ENST00000395035 ATMINO43313 823 aaPredicted RBP13.34□□□□□ -0.27
CDKL4-202ENST00000395035 MAMSTRQ6ZN01 415 aa13.34□□□□□ -0.27
CDKL4-202ENST00000395035 SLC24A1O60721 1099 aa13.31□□□□□ -0.28
CDKL4-202ENST00000395035 NPM1P06748 294 aaKnown RBP eCLIP13.31□□□□□ -0.28
CDKL4-202ENST00000395035 MS4A3Q96HJ5 214 aa13.31□□□□□ -0.28
CDKL4-202ENST00000395035 MNX1P50219 401 aaPredicted RBP13.3□□□□□ -0.28
CDKL4-202ENST00000395035 RTN4Q9NQC3 1192 aaKnown RBP13.3□□□□□ -0.28
CDKL4-202ENST00000395035 FAM163AQ96GL9 167 aaPredicted RBP13.29□□□□□ -0.28
CDKL4-202ENST00000395035 SPDYE4A6NLX3 237 aa13.28□□□□□ -0.28
CDKL4-202ENST00000395035 AMER1Q5JTC6 1135 aaPredicted RBP13.28□□□□□ -0.28
CDKL4-202ENST00000395035 SCUBE2Q9NQ36 999 aa13.23□□□□□ -0.29
CDKL4-202ENST00000395035 ATN1P54259 1190 aaPredicted RBP13.16□□□□□ -0.3
CDKL4-202ENST00000395035 POTEFA5A3E0 1075 aa13.12□□□□□ -0.31
CDKL4-202ENST00000395035 PROM2Q8N271 834 aa13.08□□□□□ -0.32
CDKL4-202ENST00000395035 CDAN1Q8IWY9 1227 aa13.07□□□□□ -0.32
CDKL4-202ENST00000395035 CCDC61Q9Y6R9 512 aa13.05□□□□□ -0.32
CDKL4-202ENST00000395035 TSPYL2Q9H2G4 693 aaPredicted RBP13.04□□□□□ -0.32
CDKL4-202ENST00000395035 BMP2KQ9NSY1 1161 aaPredicted RBP13.04□□□□□ -0.32
CDKL4-202ENST00000395035 FKBP8Q14318 412 aa13.02□□□□□ -0.33
CDKL4-202ENST00000395035 KIF12Q96FN5 646 aa13.02□□□□□ -0.33
CDKL4-202ENST00000395035 TRPC6Q9Y210 931 aa12.99□□□□□ -0.33
CDKL4-202ENST00000395035 TIE1P35590 1138 aa12.95□□□□□ -0.34
CDKL4-202ENST00000395035 COLQQ9Y215 455 aaPredicted RBP12.94□□□□□ -0.34
CDKL4-202ENST00000395035 MAP3K13O43283 966 aa12.89□□□□□ -0.35
CDKL4-202ENST00000395035 SEC24BO95487 1268 aa12.89□□□□□ -0.35
CDKL4-202ENST00000395035 TTLL13PA6NNM8 815 aa12.86□□□□□ -0.35
CDKL4-202ENST00000395035 ST18O60284 1047 aa12.86□□□□□ -0.35
CDKL4-202ENST00000395035 MMRN1Q13201 1228 aa12.82□□□□□ -0.36
CDKL4-202ENST00000395035 IER5LQ5T953 404 aa12.81□□□□□ -0.36
CDKL4-202ENST00000395035 SLAIN1Q8ND83 568 aa12.8□□□□□ -0.36
CDKL4-202ENST00000395035 SPNS2Q8IVW8 549 aa12.78□□□□□ -0.36
CDKL4-202ENST00000395035 TRIM35Q9UPQ4 493 aa12.78□□□□□ -0.36
CDKL4-202ENST00000395035 RASEFQ8IZ41 740 aa12.75□□□□□ -0.37
CDKL4-202ENST00000395035 SGIP1Q9BQI5 828 aa12.7□□□□□ -0.38
CDKL4-202ENST00000395035 TMEM121BQ9BXQ6 578 aaPredicted RBP12.67□□□□□ -0.38
CDKL4-202ENST00000395035 PCDHB13Q9Y5F0 798 aa12.65□□□□□ -0.38
CDKL4-202ENST00000395035 PLEKHG5O94827 1062 aa12.62□□□□□ -0.39
CDKL4-202ENST00000395035 PLCG2P16885 1265 aa12.62□□□□□ -0.39
CDKL4-202ENST00000395035 MIER1Q8N108 512 aa12.62□□□□□ -0.39
CDKL4-202ENST00000395035 IRX5P78411 483 aaPredicted RBP12.58□□□□□ -0.4
CDKL4-202ENST00000395035 IFNL1Q8IU54 200 aa12.57□□□□□ -0.4
CDKL4-202ENST00000395035 SNPHO15079 494 aa12.56□□□□□ -0.4
CDKL4-202ENST00000395035 MARVELD3Q96A59 401 aa12.56□□□□□ -0.4
CDKL4-202ENST00000395035 TMEM106CQ9BVX2 250 aa12.56□□□□□ -0.4
CDKL4-202ENST00000395035 FBXO3Q9UK99 471 aa12.55□□□□□ -0.4
CDKL4-202ENST00000395035 PLCD3Q8N3E9 789 aa12.54□□□□□ -0.4
CDKL4-202ENST00000395035 OCEL1Q9H607 264 aa12.48□□□□□ -0.41
CDKL4-202ENST00000395035 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.48□□□□□ -0.41
CDKL4-202ENST00000395035 ZBTB47Q9UFB7 747 aaPredicted RBP12.48□□□□□ -0.41
CDKL4-202ENST00000395035 NUBP1P53384 320 aa12.47□□□□□ -0.41
CDKL4-202ENST00000395035 KRTAP3-3Q9BYR6 98 aa12.42□□□□□ -0.42
CDKL4-202ENST00000395035 KRTAP3-2Q9BYR7 98 aa12.42□□□□□ -0.42
CDKL4-202ENST00000395035 EMP3P54852 163 aa12.4□□□□□ -0.42
CDKL4-202ENST00000395035 POTEB3A0JP26 581 aa12.38□□□□□ -0.43
CDKL4-202ENST00000395035 VASPP50552 380 aaPredicted RBP12.38□□□□□ -0.43
CDKL4-202ENST00000395035 POTEBQ6S5H4 581 aa12.38□□□□□ -0.43
CDKL4-202ENST00000395035 FAM212AQ96EL1 285 aa12.36□□□□□ -0.43
CDKL4-202ENST00000395035 HS3ST6Q96QI5 342 aa12.36□□□□□ -0.43
CDKL4-202ENST00000395035 FAM205CA6NFA0 338 aa12.31□□□□□ -0.44
CDKL4-202ENST00000395035 C3orf67Q6ZVT6 689 aa12.27□□□□□ -0.45
CDKL4-202ENST00000395035 PDCD7Q8N8D1 485 aaKnown RBP12.27□□□□□ -0.45
CDKL4-202ENST00000395035 PLCB2Q00722 1185 aa12.24□□□□□ -0.45
CDKL4-202ENST00000395035 PYGBP11216 843 aa12.22□□□□□ -0.45
CDKL4-202ENST00000395035 KLHL34Q8N239 644 aa12.22□□□□□ -0.45
CDKL4-202ENST00000395035 PCDHB8Q9UN66 801 aa12.22□□□□□ -0.45
CDKL4-202ENST00000395035 L3MBTL3Q96JM7 780 aaPredicted RBP12.21□□□□□ -0.45
CDKL4-202ENST00000395035 IFNLR1Q8IU57 520 aaPredicted RBP12.19□□□□□ -0.46
CDKL4-202ENST00000395035 DCAF8Q5TAQ9 597 aa12.17□□□□□ -0.46
CDKL4-202ENST00000395035 MKRN3Q13064 507 aaKnown RBP12.12□□□□□ -0.47
CDKL4-202ENST00000395035 GSE1Q14687 1217 aa12.12□□□□□ -0.47
CDKL4-202ENST00000395035 RNF166Q96A37 237 aaPredicted RBP12.11□□□□□ -0.47
CDKL4-202ENST00000395035 GOLGA2Q08379 1002 aa12.1□□□□□ -0.47
CDKL4-202ENST00000395035 SPOCK2Q92563 424 aa12.1□□□□□ -0.47
CDKL4-202ENST00000395035 HOXB3P14651 431 aaPredicted RBP12.08□□□□□ -0.48
CDKL4-202ENST00000395035 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.08□□□□□ -0.48
CDKL4-202ENST00000395035 CHRM1P11229 460 aaPredicted RBP12.05□□□□□ -0.48
CDKL4-202ENST00000395035 HOXB1P14653 301 aaPredicted RBP12.05□□□□□ -0.48
CDKL4-202ENST00000395035 HAP1P54257 671 aaPredicted RBP12.05□□□□□ -0.48
CDKL4-202ENST00000395035 ILDR1Q86SU0 546 aaPredicted RBP12.04□□□□□ -0.48
CDKL4-202ENST00000395035 ZNF467Q7Z7K2 595 aaPredicted RBP12.03□□□□□ -0.48
CDKL4-202ENST00000395035 ERBB3P21860 1342 aa12.01□□□□□ -0.49
CDKL4-202ENST00000395035 MYT1LQ9UL68 1186 aa12□□□□□ -0.49
CDKL4-202ENST00000395035 DCAF8L2P0C7V8 631 aa11.99□□□□□ -0.49
CDKL4-202ENST00000395035 DPY19L2Q6NUT2 758 aa11.99□□□□□ -0.49
CDKL4-202ENST00000395035 PKD2Q13563 968 aa11.98□□□□□ -0.49
CDKL4-202ENST00000395035 ZNF710Q8N1W2 664 aa11.98□□□□□ -0.49
CDKL4-202ENST00000395035 PSEN1P49768 467 aa11.95□□□□□ -0.5
CDKL4-202ENST00000395035 DOK7Q18PE1 504 aa11.94□□□□□ -0.5
CDKL4-202ENST00000395035 CIZ1Q9ULV3 898 aaPredicted RBP11.94□□□□□ -0.5
CDKL4-202ENST00000395035 BOLA1Q9Y3E2 137 aa11.94□□□□□ -0.5
CDKL4-202ENST00000395035 BCANQ96GW7 911 aa11.93□□□□□ -0.5
CDKL4-202ENST00000395035 VARS2Q5ST30 1063 aaKnown RBP11.92□□□□□ -0.5
CDKL4-202ENST00000395035 VSIG10Q8N0Z9 540 aa11.91□□□□□ -0.5
CDKL4-202ENST00000395035 G3V3G9 751 aa11.9□□□□□ -0.5
CDKL4-202ENST00000395035 TRIM41Q8WV44 630 aa11.88□□□□□ -0.51
CDKL4-202ENST00000395035 ZNF687Q8N1G0 1237 aa11.87□□□□□ -0.51
CDKL4-202ENST00000395035 PTGER2P43116 358 aa11.86□□□□□ -0.51
CDKL4-202ENST00000395035 RIMBP2O15034 1052 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms