RNA–Protein interactions for RNA: ENST00000393868.6

SUCLG1-201, Transcript of succinate-CoA ligase alpha subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUCLG1, Length 1,475 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUCLG1-201ENST00000393868 DCAF8Q5TAQ9 597 aa12.53□□□□□ -0.4
SUCLG1-201ENST00000393868 ZNF579Q8NAF0 562 aaKnown RBP12.52□□□□□ -0.41
SUCLG1-201ENST00000393868 SP7Q8TDD2 431 aaPredicted RBP12.48□□□□□ -0.41
SUCLG1-201ENST00000393868 CIZ1Q9ULV3 898 aaPredicted RBP12.48□□□□□ -0.41
SUCLG1-201ENST00000393868 CCDC61Q9Y6R9 512 aa12.48□□□□□ -0.41
SUCLG1-201ENST00000393868 CLCN6P51797 869 aa12.44□□□□□ -0.42
SUCLG1-201ENST00000393868 PHF12Q96QT6 1004 aa12.44□□□□□ -0.42
SUCLG1-201ENST00000393868 TRIM41Q8WV44 630 aa12.4□□□□□ -0.43
SUCLG1-201ENST00000393868 KIF12Q96FN5 646 aa12.37□□□□□ -0.43
SUCLG1-201ENST00000393868 PYGBP11216 843 aa12.36□□□□□ -0.43
SUCLG1-201ENST00000393868 GABBR2O75899 941 aa12.35□□□□□ -0.43
SUCLG1-201ENST00000393868 CHRM1P11229 460 aaPredicted RBP12.34□□□□□ -0.43
SUCLG1-201ENST00000393868 MAP3K13O43283 966 aa12.33□□□□□ -0.44
SUCLG1-201ENST00000393868 SGIP1Q9BQI5 828 aa12.33□□□□□ -0.44
SUCLG1-201ENST00000393868 PCDHB13Q9Y5F0 798 aa12.31□□□□□ -0.44
SUCLG1-201ENST00000393868 MS4A3Q96HJ5 214 aa12.3□□□□□ -0.44
SUCLG1-201ENST00000393868 GALR2O43603 387 aaPredicted RBP12.28□□□□□ -0.44
SUCLG1-201ENST00000393868 ECM2O94769 699 aaPredicted RBP12.27□□□□□ -0.44
SUCLG1-201ENST00000393868 PKD2Q13563 968 aa12.27□□□□□ -0.44
SUCLG1-201ENST00000393868 AMER1Q5JTC6 1135 aaPredicted RBP12.25□□□□□ -0.45
SUCLG1-201ENST00000393868 ZNF467Q7Z7K2 595 aaPredicted RBP12.25□□□□□ -0.45
SUCLG1-201ENST00000393868 IFNL1Q8IU54 200 aa12.23□□□□□ -0.45
SUCLG1-201ENST00000393868 DCBLD2Q96PD2 775 aa12.2□□□□□ -0.46
SUCLG1-201ENST00000393868 PCDHB8Q9UN66 801 aa12.2□□□□□ -0.46
SUCLG1-201ENST00000393868 RIOK3O14730 519 aaKnown RBP12.16□□□□□ -0.46
SUCLG1-201ENST00000393868 TIE1P35590 1138 aa12.15□□□□□ -0.46
SUCLG1-201ENST00000393868 RTN4Q9NQC3 1192 aaKnown RBP12.14□□□□□ -0.47
SUCLG1-201ENST00000393868 RNF25Q96BH1 459 aaPredicted RBP12.14□□□□□ -0.47
SUCLG1-201ENST00000393868 TAOK2Q9UL54 1235 aa12.14□□□□□ -0.47
SUCLG1-201ENST00000393868 TRPC6Q9Y210 931 aa12.14□□□□□ -0.47
SUCLG1-201ENST00000393868 PDAP1Q13442 181 aaKnown RBP12.13□□□□□ -0.47
SUCLG1-201ENST00000393868 RGL2O15211 777 aa12.11□□□□□ -0.47
SUCLG1-201ENST00000393868 VGFO15240 615 aaPredicted RBP12.1□□□□□ -0.47
SUCLG1-201ENST00000393868 PSEN1P49768 467 aa12.1□□□□□ -0.47
SUCLG1-201ENST00000393868 BMP2KQ9NSY1 1161 aaPredicted RBP12.1□□□□□ -0.47
SUCLG1-201ENST00000393868 TMEM106CQ9BVX2 250 aa12.09□□□□□ -0.47
SUCLG1-201ENST00000393868 ASTLQ6HA08 431 aaPredicted RBP12.08□□□□□ -0.47
SUCLG1-201ENST00000393868 TTLL13PA6NNM8 815 aa12.08□□□□□ -0.48
SUCLG1-201ENST00000393868 ATMINO43313 823 aaPredicted RBP12.08□□□□□ -0.48
SUCLG1-201ENST00000393868 POTEIP0CG38 1075 aa12.06□□□□□ -0.48
SUCLG1-201ENST00000393868 ATN1P54259 1190 aaPredicted RBP12.03□□□□□ -0.48
SUCLG1-201ENST00000393868 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.02□□□□□ -0.49
SUCLG1-201ENST00000393868 ZFP91Q96JP5 570 aaPredicted RBP12.02□□□□□ -0.49
SUCLG1-201ENST00000393868 TRIM35Q9UPQ4 493 aa12.01□□□□□ -0.49
SUCLG1-201ENST00000393868 GOLGA2Q08379 1002 aa11.99□□□□□ -0.49
SUCLG1-201ENST00000393868 DCAF8L2P0C7V8 631 aa11.98□□□□□ -0.49
SUCLG1-201ENST00000393868 PELP1Q8IZL8 1130 aaKnown RBP11.96□□□□□ -0.49
SUCLG1-201ENST00000393868 SLC39A7Q92504 469 aa11.96□□□□□ -0.49
SUCLG1-201ENST00000393868 STK25O00506 426 aa11.95□□□□□ -0.5
SUCLG1-201ENST00000393868 BCL11BQ9C0K0 894 aaPredicted RBP11.95□□□□□ -0.5
SUCLG1-201ENST00000393868 CABP2Q9NPB3 220 aa11.94□□□□□ -0.5
SUCLG1-201ENST00000393868 C7P10643 843 aa11.93□□□□□ -0.5
SUCLG1-201ENST00000393868 IER5LQ5T953 404 aa11.93□□□□□ -0.5
SUCLG1-201ENST00000393868 STK24Q9Y6E0 443 aa11.93□□□□□ -0.5
SUCLG1-201ENST00000393868 MKRN3Q13064 507 aaKnown RBP11.92□□□□□ -0.5
SUCLG1-201ENST00000393868 METRNQ9UJH8 293 aa11.9□□□□□ -0.5
SUCLG1-201ENST00000393868 CHGAP10645 457 aaKnown RBP11.89□□□□□ -0.51
SUCLG1-201ENST00000393868 HS6ST3Q8IZP7 471 aa11.89□□□□□ -0.51
SUCLG1-201ENST00000393868 SEC24BO95487 1268 aa11.86□□□□□ -0.51
SUCLG1-201ENST00000393868 EFCAB3Q8N7B9 438 aa11.86□□□□□ -0.51
SUCLG1-201ENST00000393868 PLCG2P16885 1265 aa11.83□□□□□ -0.52
SUCLG1-201ENST00000393868 SOX12O15370 315 aa11.82□□□□□ -0.52
SUCLG1-201ENST00000393868 IRX5P78411 483 aaPredicted RBP11.82□□□□□ -0.52
SUCLG1-201ENST00000393868 OCEL1Q9H607 264 aa11.82□□□□□ -0.52
SUCLG1-201ENST00000393868 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.82□□□□□ -0.52
SUCLG1-201ENST00000393868 ABCC9O60706 1549 aa11.79□□□□□ -0.52
SUCLG1-201ENST00000393868 COLQQ9Y215 455 aaPredicted RBP11.78□□□□□ -0.52
SUCLG1-201ENST00000393868 DNAJC5Q9H3Z4 198 aa11.77□□□□□ -0.52
SUCLG1-201ENST00000393868 POTEFA5A3E0 1075 aa11.76□□□□□ -0.53
SUCLG1-201ENST00000393868 NLRP6P59044 892 aa11.76□□□□□ -0.53
SUCLG1-201ENST00000393868 CCDC180Q9P1Z9 1646 aa11.75□□□□□ -0.53
SUCLG1-201ENST00000393868 ILDR1Q86SU0 546 aaPredicted RBP11.75□□□□□ -0.53
SUCLG1-201ENST00000393868 PDCD7Q8N8D1 485 aaKnown RBP11.74□□□□□ -0.53
SUCLG1-201ENST00000393868 PHF8Q9UPP1 1060 aa11.74□□□□□ -0.53
SUCLG1-201ENST00000393868 MFRPQ9BY79 579 aa11.72□□□□□ -0.53
SUCLG1-201ENST00000393868 LHX8Q68G74 356 aa11.7□□□□□ -0.54
SUCLG1-201ENST00000393868 RYDENQ9NUL5 291 aaKnown RBP11.7□□□□□ -0.54
SUCLG1-201ENST00000393868 FBXO22Q8NEZ5 403 aa11.69□□□□□ -0.54
SUCLG1-201ENST00000393868 BBXQ8WY36 941 aaPredicted RBP11.69□□□□□ -0.54
SUCLG1-201ENST00000393868 L3MBTL3Q96JM7 780 aaPredicted RBP11.69□□□□□ -0.54
SUCLG1-201ENST00000393868 NKX1-1Q15270 411 aaPredicted RBP11.68□□□□□ -0.54
SUCLG1-201ENST00000393868 POTEB2H3BUK9 544 aa11.67□□□□□ -0.54
SUCLG1-201ENST00000393868 G3V3G9 751 aa11.66□□□□□ -0.54
SUCLG1-201ENST00000393868 MS4A4AQ96JQ5 239 aa11.66□□□□□ -0.54
SUCLG1-201ENST00000393868 MAMSTRQ6ZN01 415 aa11.65□□□□□ -0.54
SUCLG1-201ENST00000393868 DPY19L2Q6NUT2 758 aa11.64□□□□□ -0.55
SUCLG1-201ENST00000393868 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.63□□□□□ -0.55
SUCLG1-201ENST00000393868 SCUBE2Q9NQ36 999 aa11.62□□□□□ -0.55
SUCLG1-201ENST00000393868 BOLA1Q9Y3E2 137 aa11.61□□□□□ -0.55
SUCLG1-201ENST00000393868 POTEJP0CG39 1038 aa11.6□□□□□ -0.55
SUCLG1-201ENST00000393868 GTPBP6O43824 516 aaPredicted RBP11.57□□□□□ -0.56
SUCLG1-201ENST00000393868 C3orf67Q6ZVT6 689 aa11.57□□□□□ -0.56
SUCLG1-201ENST00000393868 MICALL2Q8IY33 904 aa11.56□□□□□ -0.56
SUCLG1-201ENST00000393868 TMEM121BQ9BXQ6 578 aaPredicted RBP11.54□□□□□ -0.56
SUCLG1-201ENST00000393868 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.54□□□□□ -0.56
SUCLG1-201ENST00000393868 PPP1R37O75864 691 aa11.53□□□□□ -0.56
SUCLG1-201ENST00000393868 SPRYD3Q8NCJ5 442 aa11.53□□□□□ -0.56
SUCLG1-201ENST00000393868 OTUD5Q96G74 571 aa11.53□□□□□ -0.56
SUCLG1-201ENST00000393868 PAXIP1Q6ZW49 1069 aaPredicted RBP11.5□□□□□ -0.57
SUCLG1-201ENST00000393868 CFAP44Q96MT7 982 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms