RNA–Protein interactions for RNA: ENST00000393579.2

PCNPP3-201, Transcript of PEST containing nuclear protein pseudogene 3, humanhuman

BASIC

Gene PCNPP3, Length 471 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNPP3-201ENST00000393579 MS4A3Q96HJ5 214 aa9.28□□□□□ -0.92
PCNPP3-201ENST00000393579 SCUBE2Q9NQ36 999 aa9.28□□□□□ -0.92
PCNPP3-201ENST00000393579 ATMINO43313 823 aaPredicted RBP9.26□□□□□ -0.93
PCNPP3-201ENST00000393579 POTEJP0CG39 1038 aa9.25□□□□□ -0.93
PCNPP3-201ENST00000393579 ASTLQ6HA08 431 aaPredicted RBP9.25□□□□□ -0.93
PCNPP3-201ENST00000393579 LCE2DQ5TA82 110 aaPredicted RBP9.2□□□□□ -0.94
PCNPP3-201ENST00000393579 SPDYE4A6NLX3 237 aa9.19□□□□□ -0.94
PCNPP3-201ENST00000393579 TSPYL2Q9H2G4 693 aaPredicted RBP9.18□□□□□ -0.94
PCNPP3-201ENST00000393579 ATN1P54259 1190 aaPredicted RBP9.17□□□□□ -0.94
PCNPP3-201ENST00000393579 MNX1P50219 401 aaPredicted RBP9.15□□□□□ -0.94
PCNPP3-201ENST00000393579 CDAN1Q8IWY9 1227 aa9.12□□□□□ -0.95
PCNPP3-201ENST00000393579 SEC24BO95487 1268 aa9.09□□□□□ -0.95
PCNPP3-201ENST00000393579 BMP2KQ9NSY1 1161 aaPredicted RBP9.07□□□□□ -0.96
PCNPP3-201ENST00000393579 POTEFA5A3E0 1075 aa9.04□□□□□ -0.96
PCNPP3-201ENST00000393579 KIF12Q96FN5 646 aa9.04□□□□□ -0.96
PCNPP3-201ENST00000393579 CCDC61Q9Y6R9 512 aa9.04□□□□□ -0.96
PCNPP3-201ENST00000393579 TRPC6Q9Y210 931 aa9.03□□□□□ -0.96
PCNPP3-201ENST00000393579 COLQQ9Y215 455 aaPredicted RBP9□□□□□ -0.97
PCNPP3-201ENST00000393579 MAP3K13O43283 966 aa8.99□□□□□ -0.97
PCNPP3-201ENST00000393579 TIE1P35590 1138 aa8.99□□□□□ -0.97
PCNPP3-201ENST00000393579 SLAIN1Q8ND83 568 aa8.98□□□□□ -0.97
PCNPP3-201ENST00000393579 TTLL13PA6NNM8 815 aa8.95□□□□□ -0.98
PCNPP3-201ENST00000393579 ST18O60284 1047 aa8.95□□□□□ -0.98
PCNPP3-201ENST00000393579 PLEKHG5O94827 1062 aa8.95□□□□□ -0.98
PCNPP3-201ENST00000393579 CSRNP3Q8WYN3 585 aa8.95□□□□□ -0.98
PCNPP3-201ENST00000393579 TRIM35Q9UPQ4 493 aa8.93□□□□□ -0.98
PCNPP3-201ENST00000393579 MMRN1Q13201 1228 aa8.92□□□□□ -0.98
PCNPP3-201ENST00000393579 IER5LQ5T953 404 aa8.88□□□□□ -0.99
PCNPP3-201ENST00000393579 SPNS2Q8IVW8 549 aa8.88□□□□□ -0.99
PCNPP3-201ENST00000393579 RASEFQ8IZ41 740 aa8.88□□□□□ -0.99
PCNPP3-201ENST00000393579 PLCG2P16885 1265 aa8.87□□□□□ -0.99
PCNPP3-201ENST00000393579 MIER1Q8N108 512 aa8.87□□□□□ -0.99
PCNPP3-201ENST00000393579 PCDHB13Q9Y5F0 798 aa8.87□□□□□ -0.99
PCNPP3-201ENST00000393579 MARVELD3Q96A59 401 aa8.82□□□□□ -1
PCNPP3-201ENST00000393579 TMEM106CQ9BVX2 250 aa8.81□□□□□ -1
PCNPP3-201ENST00000393579 TMEM121BQ9BXQ6 578 aaPredicted RBP8.8□□□□□ -1
PCNPP3-201ENST00000393579 SNPHO15079 494 aa8.78□□□□□ -1
PCNPP3-201ENST00000393579 SGIP1Q9BQI5 828 aa8.77□□□□□ -1.01
PCNPP3-201ENST00000393579 IFNL1Q8IU54 200 aa8.76□□□□□ -1.01
PCNPP3-201ENST00000393579 PLCD3Q8N3E9 789 aa8.76□□□□□ -1.01
PCNPP3-201ENST00000393579 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.75□□□□□ -1.01
PCNPP3-201ENST00000393579 EHMT2Q96KQ7 1210 aa8.73□□□□□ -1.01
PCNPP3-201ENST00000393579 EMP3P54852 163 aa8.72□□□□□ -1.01
PCNPP3-201ENST00000393579 PROM2Q8N271 834 aa8.72□□□□□ -1.01
PCNPP3-201ENST00000393579 IRX5P78411 483 aaPredicted RBP8.71□□□□□ -1.02
PCNPP3-201ENST00000393579 OCEL1Q9H607 264 aa8.7□□□□□ -1.02
PCNPP3-201ENST00000393579 FAM212AQ96EL1 285 aa8.69□□□□□ -1.02
PCNPP3-201ENST00000393579 ZBTB47Q9UFB7 747 aaPredicted RBP8.68□□□□□ -1.02
PCNPP3-201ENST00000393579 C3orf67Q6ZVT6 689 aa8.66□□□□□ -1.02
PCNPP3-201ENST00000393579 FAM205CA6NFA0 338 aa8.64□□□□□ -1.03
PCNPP3-201ENST00000393579 NUBP1P53384 320 aa8.63□□□□□ -1.03
PCNPP3-201ENST00000393579 HS3ST6Q96QI5 342 aa8.63□□□□□ -1.03
PCNPP3-201ENST00000393579 KRTAP3-3Q9BYR6 98 aa8.6□□□□□ -1.03
PCNPP3-201ENST00000393579 KRTAP3-2Q9BYR7 98 aa8.6□□□□□ -1.03
PCNPP3-201ENST00000393579 PYGBP11216 843 aa8.59□□□□□ -1.03
PCNPP3-201ENST00000393579 GOLGA2Q08379 1002 aa8.58□□□□□ -1.04
PCNPP3-201ENST00000393579 DCAF8Q5TAQ9 597 aa8.57□□□□□ -1.04
PCNPP3-201ENST00000393579 PCDHB8Q9UN66 801 aa8.56□□□□□ -1.04
PCNPP3-201ENST00000393579 POTEB3A0JP26 581 aa8.55□□□□□ -1.04
PCNPP3-201ENST00000393579 POTEBQ6S5H4 581 aa8.55□□□□□ -1.04
PCNPP3-201ENST00000393579 MKRN3Q13064 507 aaKnown RBP8.54□□□□□ -1.04
PCNPP3-201ENST00000393579 L3MBTL3Q96JM7 780 aaPredicted RBP8.54□□□□□ -1.04
PCNPP3-201ENST00000393579 PDCD7Q8N8D1 485 aaKnown RBP8.5□□□□□ -1.05
PCNPP3-201ENST00000393579 RNF166Q96A37 237 aaPredicted RBP8.49□□□□□ -1.05
PCNPP3-201ENST00000393579 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.48□□□□□ -1.05
PCNPP3-201ENST00000393579 ZNF710Q8N1W2 664 aa8.47□□□□□ -1.05
PCNPP3-201ENST00000393579 G3V3G9 751 aa8.46□□□□□ -1.06
PCNPP3-201ENST00000393579 ERBB3P21860 1342 aa8.45□□□□□ -1.06
PCNPP3-201ENST00000393579 ZNF467Q7Z7K2 595 aaPredicted RBP8.42□□□□□ -1.06
PCNPP3-201ENST00000393579 MYT1LQ9UL68 1186 aa8.41□□□□□ -1.06
PCNPP3-201ENST00000393579 VARS2Q5ST30 1063 aaKnown RBP8.37□□□□□ -1.07
PCNPP3-201ENST00000393579 HOXB1P14653 301 aaPredicted RBP8.36□□□□□ -1.07
PCNPP3-201ENST00000393579 PSEN1P49768 467 aa8.36□□□□□ -1.07
PCNPP3-201ENST00000393579 DOK7Q18PE1 504 aa8.36□□□□□ -1.07
PCNPP3-201ENST00000393579 DPY19L2Q6NUT2 758 aa8.36□□□□□ -1.07
PCNPP3-201ENST00000393579 RIMBP2O15034 1052 aa8.35□□□□□ -1.07
PCNPP3-201ENST00000393579 HOXB3P14651 431 aaPredicted RBP8.35□□□□□ -1.07
PCNPP3-201ENST00000393579 BOLA1Q9Y3E2 137 aa8.35□□□□□ -1.07
PCNPP3-201ENST00000393579 GSE1Q14687 1217 aa8.33□□□□□ -1.08
PCNPP3-201ENST00000393579 KLHL34Q8N239 644 aa8.32□□□□□ -1.08
PCNPP3-201ENST00000393579 CABP2Q9NPB3 220 aa8.3□□□□□ -1.08
PCNPP3-201ENST00000393579 PDAP1Q13442 181 aaKnown RBP8.27□□□□□ -1.09
PCNPP3-201ENST00000393579 ANKRD13DQ6ZTN6 518 aa8.27□□□□□ -1.09
PCNPP3-201ENST00000393579 PTGER2P43116 358 aa8.26□□□□□ -1.09
PCNPP3-201ENST00000393579 FKBP8Q14318 412 aa8.26□□□□□ -1.09
PCNPP3-201ENST00000393579 ZNF687Q8N1G0 1237 aa8.24□□□□□ -1.09
PCNPP3-201ENST00000393579 ILDR1Q86SU0 546 aaPredicted RBP8.23□□□□□ -1.09
PCNPP3-201ENST00000393579 FBXO3Q9UK99 471 aa8.22□□□□□ -1.09
PCNPP3-201ENST00000393579 CHRM1P11229 460 aaPredicted RBP8.2□□□□□ -1.1
PCNPP3-201ENST00000393579 ZSWIM6Q9HCJ5 1215 aa8.18□□□□□ -1.1
PCNPP3-201ENST00000393579 PLA2G2EQ9NZK7 142 aa8.18□□□□□ -1.1
PCNPP3-201ENST00000393579 CIZ1Q9ULV3 898 aaPredicted RBP8.15□□□□□ -1.1
PCNPP3-201ENST00000393579 LSM11P83369 360 aaKnown RBP eCLIP8.13□□□□□ -1.11
PCNPP3-201ENST00000393579 ARSIQ5FYB1 569 aa8.13□□□□□ -1.11
PCNPP3-201ENST00000393579 GPR153Q6NV75 609 aa8.13□□□□□ -1.11
PCNPP3-201ENST00000393579 VASPP50552 380 aaPredicted RBP8.11□□□□□ -1.11
PCNPP3-201ENST00000393579 MICALL2Q8IY33 904 aa8.11□□□□□ -1.11
PCNPP3-201ENST00000393579 EFCAB3Q8N7B9 438 aa8.11□□□□□ -1.11
PCNPP3-201ENST00000393579 TMEM92Q6UXU6 159 aa8.1□□□□□ -1.11
PCNPP3-201ENST00000393579 ZNF316A6NFI3 1004 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms