RNA–Protein interactions for RNA: ENST00000393415.7

MDM2-211, Transcript of MDM2 proto-oncogene, humanhuman

TSL 5

Gene MDM2, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-211ENST00000393415 ABCC8Q09428 1581 aa12.33□□□□□ -0.44
MDM2-211ENST00000393415 SNAPC4Q5SXM2 1469 aa12.33□□□□□ -0.44
MDM2-211ENST00000393415 WIZO95785 1651 aa12.3□□□□□ -0.44
MDM2-211ENST00000393415 ABCC10Q5T3U5 1492 aa12.29□□□□□ -0.44
MDM2-211ENST00000393415 PRDM2Q13029 1718 aa12.28□□□□□ -0.44
MDM2-211ENST00000393415 TDRD9Q8NDG6 1382 aaKnown RBP12.27□□□□□ -0.45
MDM2-211ENST00000393415 MAGI1Q96QZ7 1491 aaPredicted RBP12.26□□□□□ -0.45
MDM2-211ENST00000393415 DNMBPQ6XZF7 1577 aa12.26□□□□□ -0.45
MDM2-211ENST00000393415 POLA1P09884 1462 aaPredicted RBP12.21□□□□□ -0.45
MDM2-211ENST00000393415 DIP2BQ9P265 1576 aa12.21□□□□□ -0.46
MDM2-211ENST00000393415 RAD54L2Q9Y4B4 1467 aa12.2□□□□□ -0.46
MDM2-211ENST00000393415 WDR97A6NE52 1622 aa12.17□□□□□ -0.46
MDM2-211ENST00000393415 GRIN2BQ13224 1484 aa12.16□□□□□ -0.46
MDM2-211ENST00000393415 SOGA1O94964 1423 aa12.16□□□□□ -0.46
MDM2-211ENST00000393415 MAPKBP1O60336 1514 aa12.16□□□□□ -0.46
MDM2-211ENST00000393415 NCBP3Q53F19 620 aaKnown RBP12.15□□□□□ -0.46
MDM2-211ENST00000393415 TSPOAP1O95153 1857 aa12.14□□□□□ -0.47
MDM2-211ENST00000393415 CEP170Q5SW79 1584 aa12.14□□□□□ -0.47
MDM2-211ENST00000393415 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.14□□□□□ -0.472e-8■■□□□ 11.8
MDM2-211ENST00000393415 NPM1P06748 294 aaKnown RBP eCLIP12.13□□□□□ -0.47
MDM2-211ENST00000393415 SPATA31D1Q6ZQQ2 1576 aa12.11□□□□□ -0.47
MDM2-211ENST00000393415 TOP2AP11388 1531 aaKnown RBP12.07□□□□□ -0.48
MDM2-211ENST00000393415 SHROOM2Q13796 1616 aa12.06□□□□□ -0.48
MDM2-211ENST00000393415 TOP2BQ02880 1626 aa12.05□□□□□ -0.48
MDM2-211ENST00000393415 CERKQ8TCT0 537 aa12.05□□□□□ -0.48
MDM2-211ENST00000393415 NUP160Q12769 1436 aa12.01□□□□□ -0.49
MDM2-211ENST00000393415 COL17A1Q9UMD9 1497 aaPredicted RBP12.01□□□□□ -0.49
MDM2-211ENST00000393415 GRIN2AQ12879 1464 aa12□□□□□ -0.49
MDM2-211ENST00000393415 PBRM1Q86U86 1689 aa12□□□□□ -0.49
MDM2-211ENST00000393415 FGD5Q6ZNL6 1462 aa11.99□□□□□ -0.49
MDM2-211ENST00000393415 CCDC88BA6NC98 1476 aa11.97□□□□□ -0.49
MDM2-211ENST00000393415 PRG4Q92954 1404 aaPredicted RBP11.97□□□□□ -0.49
MDM2-211ENST00000393415 ADCY10Q96PN6 1610 aa11.97□□□□□ -0.49
MDM2-211ENST00000393415 PPRC1Q5VV67 1664 aaKnown RBP11.96□□□□□ -0.5
MDM2-211ENST00000393415 JPH4Q96JJ6 628 aa11.91□□□□□ -0.5
MDM2-211ENST00000393415 PCF11O94913 1555 aaKnown RBP11.89□□□□□ -0.51
MDM2-211ENST00000393415 GLI2P10070 1586 aa11.88□□□□□ -0.51
MDM2-211ENST00000393415 PTPRMP28827 1452 aa11.87□□□□□ -0.51
MDM2-211ENST00000393415 NPM3O75607 178 aaKnown RBP11.86□□□□□ -0.51
MDM2-211ENST00000393415 ABCA5Q8WWZ7 1642 aa11.86□□□□□ -0.51
MDM2-211ENST00000393415 ADAMTS12P58397 1594 aa11.84□□□□□ -0.51
MDM2-211ENST00000393415 TEX14Q8IWB6 1497 aa11.82□□□□□ -0.52
MDM2-211ENST00000393415 CUX1P39880 1505 aa11.81□□□□□ -0.52
MDM2-211ENST00000393415 PLB1Q6P1J6 1458 aa11.8□□□□□ -0.52
MDM2-211ENST00000393415 ABCA10Q8WWZ4 1543 aa11.8□□□□□ -0.52
MDM2-211ENST00000393415 ASXL2Q76L83 1435 aa11.79□□□□□ -0.52
MDM2-211ENST00000393415 HSPA2P54652 639 aa11.79□□□□□ -0.52
MDM2-211ENST00000393415 FHAD1B1AJZ9 1412 aa11.78□□□□□ -0.52
MDM2-211ENST00000393415 KIF21BO75037 1637 aa11.78□□□□□ -0.52
MDM2-211ENST00000393415 CAPN15O75808 1086 aa11.77□□□□□ -0.53
MDM2-211ENST00000393415 POTEHQ6S545 545 aa11.77□□□□□ -0.53
MDM2-211ENST00000393415 MAP3K4Q9Y6R4 1608 aa11.77□□□□□ -0.53
MDM2-211ENST00000393415 ADAMTSL3P82987 1691 aa11.77□□□□□ -0.53
MDM2-211ENST00000393415 U3KPZ7 1027 aaPredicted RBP11.74□□□□□ -0.53
MDM2-211ENST00000393415 ABCC2Q92887 1545 aa11.72□□□□□ -0.53
MDM2-211ENST00000393415 EPRSP07814 1512 aaKnown RBP11.71□□□□□ -0.53
MDM2-211ENST00000393415 KIAA0586Q9BVV6 1533 aa11.7□□□□□ -0.54
MDM2-211ENST00000393415 RUSC2Q8N2Y8 1516 aa11.7□□□□□ -0.54
MDM2-211ENST00000393415 DSG3P32926 999 aa11.69□□□□□ -0.54
MDM2-211ENST00000393415 SPINK5Q9NQ38 1064 aaPredicted RBP11.67□□□□□ -0.54
MDM2-211ENST00000393415 PTPRGP23470 1445 aa11.66□□□□□ -0.54
MDM2-211ENST00000393415 MADDQ8WXG6 1647 aa11.64□□□□□ -0.55
MDM2-211ENST00000393415 CUL7Q14999 1698 aa11.64□□□□□ -0.55
MDM2-211ENST00000393415 ERICH3Q5RHP9 1530 aa11.63□□□□□ -0.55
MDM2-211ENST00000393415 BCORL1Q5H9F3 1711 aa11.62□□□□□ -0.55
MDM2-211ENST00000393415 MAGI3Q5TCQ9 1506 aa11.6□□□□□ -0.55
MDM2-211ENST00000393415 TTBK1Q5TCY1 1321 aaPredicted RBP11.6□□□□□ -0.55
MDM2-211ENST00000393415 UHRF1BP1LA0JNW5 1464 aa11.59□□□□□ -0.55
MDM2-211ENST00000393415 IQSEC2Q5JU85 1478 aa11.59□□□□□ -0.55
MDM2-211ENST00000393415 YEATS2Q9ULM3 1422 aa11.58□□□□□ -0.56
MDM2-211ENST00000393415 MED1Q15648 1581 aaPredicted RBP11.58□□□□□ -0.56
MDM2-211ENST00000393415 RIMS1Q86UR5 1692 aaKnown RBP11.56□□□□□ -0.56
MDM2-211ENST00000393415 APLP2Q06481 763 aa11.56□□□□□ -0.56
MDM2-211ENST00000393415 ARID4BQ4LE39 1312 aaPredicted RBP11.56□□□□□ -0.56
MDM2-211ENST00000393415 WRNQ14191 1432 aaPredicted RBP eCLIP11.55□□□□□ -0.56
MDM2-211ENST00000393415 CD109Q6YHK3 1445 aa11.55□□□□□ -0.56
MDM2-211ENST00000393415 KDM5BQ9UGL1 1544 aa11.55□□□□□ -0.56
MDM2-211ENST00000393415 TNIKQ9UKE5 1360 aa11.54□□□□□ -0.56
MDM2-211ENST00000393415 ARAP3Q8WWN8 1544 aa11.54□□□□□ -0.56
MDM2-211ENST00000393415 LTBP4Q8N2S1 1624 aa11.53□□□□□ -0.56
MDM2-211ENST00000393415 UACAQ9BZF9 1416 aa11.53□□□□□ -0.56
MDM2-211ENST00000393415 STRCQ7RTU9 1775 aa11.53□□□□□ -0.56
MDM2-211ENST00000393415 CFAP43Q8NDM7 1665 aa11.5□□□□□ -0.57
MDM2-211ENST00000393415 WDR7Q9Y4E6 1490 aa11.5□□□□□ -0.57
MDM2-211ENST00000393415 ZCCHC11Q5TAX3 1644 aaKnown RBP11.49□□□□□ -0.57
MDM2-211ENST00000393415 PTPRTO14522 1441 aa11.49□□□□□ -0.57
MDM2-211ENST00000393415 UBAP1LF5GYI3 381 aa11.48□□□□□ -0.57
MDM2-211ENST00000393415 CARMIL2Q6F5E8 1435 aa11.47□□□□□ -0.57
MDM2-211ENST00000393415 ZNF219Q9P2Y4 722 aaPredicted RBP11.47□□□□□ -0.57
MDM2-211ENST00000393415 RAPGEF3O95398 923 aa11.44□□□□□ -0.58
MDM2-211ENST00000393415 PREX1Q8TCU6 1659 aa11.43□□□□□ -0.58
MDM2-211ENST00000393415 HSPA1LP34931 641 aa11.43□□□□□ -0.58
MDM2-211ENST00000393415 KCNH8Q96L42 1107 aa11.43□□□□□ -0.58
MDM2-211ENST00000393415 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.42□□□□□ -0.58
MDM2-211ENST00000393415 ABCB7O75027 752 aa11.42□□□□□ -0.58
MDM2-211ENST00000393415 HNRNPUL2Q1KMD3 747 aaKnown RBP11.42□□□□□ -0.58
MDM2-211ENST00000393415 PHLDB1Q86UU1 1377 aa11.41□□□□□ -0.58
MDM2-211ENST00000393415 POGZQ7Z3K3 1410 aa11.39□□□□□ -0.59
MDM2-211ENST00000393415 TTC37Q6PGP7 1564 aa11.37□□□□□ -0.59
MDM2-211ENST00000393415 SLC4A2P04920 1241 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 1022.1 ms