RNA–Protein interactions for RNA: ENST00000390996.1

RNU6-1009P-201, Transcript of RNA, U6 small nuclear 1009, pseudogene, humanhuman

BASIC

Gene RNU6-1009P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1009P-201ENST00000390996 PELP1Q8IZL8 1130 aaKnown RBP11.97□□□□□ -0.49
RNU6-1009P-201ENST00000390996 ASTLQ6HA08 431 aaPredicted RBP11.94□□□□□ -0.5
RNU6-1009P-201ENST00000390996 PLCD3Q8N3E9 789 aa11.94□□□□□ -0.5
RNU6-1009P-201ENST00000390996 KIF12Q96FN5 646 aa11.94□□□□□ -0.5
RNU6-1009P-201ENST00000390996 POTEB2H3BUK9 544 aa11.91□□□□□ -0.5
RNU6-1009P-201ENST00000390996 ATMINO43313 823 aaPredicted RBP11.91□□□□□ -0.5
RNU6-1009P-201ENST00000390996 NUBP1P53384 320 aa11.88□□□□□ -0.51
RNU6-1009P-201ENST00000390996 MAP3K13O43283 966 aa11.86□□□□□ -0.51
RNU6-1009P-201ENST00000390996 ZBTB47Q9UFB7 747 aaPredicted RBP11.85□□□□□ -0.51
RNU6-1009P-201ENST00000390996 OTUD5Q96G74 571 aa11.84□□□□□ -0.51
RNU6-1009P-201ENST00000390996 TRPC6Q9Y210 931 aa11.84□□□□□ -0.51
RNU6-1009P-201ENST00000390996 METRNQ9UJH8 293 aa11.82□□□□□ -0.52
RNU6-1009P-201ENST00000390996 C7P10643 843 aa11.81□□□□□ -0.52
RNU6-1009P-201ENST00000390996 ATN1P54259 1190 aaPredicted RBP11.81□□□□□ -0.52
RNU6-1009P-201ENST00000390996 SLC39A7Q92504 469 aa11.81□□□□□ -0.52
RNU6-1009P-201ENST00000390996 BMP2KQ9NSY1 1161 aaPredicted RBP11.81□□□□□ -0.52
RNU6-1009P-201ENST00000390996 POTEJP0CG39 1038 aa11.76□□□□□ -0.53
RNU6-1009P-201ENST00000390996 TIE1P35590 1138 aa11.76□□□□□ -0.53
RNU6-1009P-201ENST00000390996 FBXO3Q9UK99 471 aa11.76□□□□□ -0.53
RNU6-1009P-201ENST00000390996 SGIP1Q9BQI5 828 aa11.75□□□□□ -0.53
RNU6-1009P-201ENST00000390996 FAM212AQ96EL1 285 aa11.73□□□□□ -0.53
RNU6-1009P-201ENST00000390996 POTEFA5A3E0 1075 aa11.71□□□□□ -0.53
RNU6-1009P-201ENST00000390996 TTLL13PA6NNM8 815 aa11.71□□□□□ -0.53
RNU6-1009P-201ENST00000390996 PCDHB13Q9Y5F0 798 aa11.71□□□□□ -0.53
RNU6-1009P-201ENST00000390996 IFNL1Q8IU54 200 aa11.69□□□□□ -0.54
RNU6-1009P-201ENST00000390996 VASPP50552 380 aaPredicted RBP11.68□□□□□ -0.54
RNU6-1009P-201ENST00000390996 TRIM35Q9UPQ4 493 aa11.62□□□□□ -0.55
RNU6-1009P-201ENST00000390996 COLQQ9Y215 455 aaPredicted RBP11.62□□□□□ -0.55
RNU6-1009P-201ENST00000390996 DCAF8Q5TAQ9 597 aa11.61□□□□□ -0.55
RNU6-1009P-201ENST00000390996 MAMSTRQ6ZN01 415 aa11.61□□□□□ -0.55
RNU6-1009P-201ENST00000390996 PYGBP11216 843 aa11.59□□□□□ -0.55
RNU6-1009P-201ENST00000390996 IER5LQ5T953 404 aa11.59□□□□□ -0.55
RNU6-1009P-201ENST00000390996 TMEM106CQ9BVX2 250 aa11.58□□□□□ -0.56
RNU6-1009P-201ENST00000390996 KLHL34Q8N239 644 aa11.55□□□□□ -0.56
RNU6-1009P-201ENST00000390996 SCUBE2Q9NQ36 999 aa11.55□□□□□ -0.56
RNU6-1009P-201ENST00000390996 SEC24BO95487 1268 aa11.54□□□□□ -0.56
RNU6-1009P-201ENST00000390996 PCDHB8Q9UN66 801 aa11.52□□□□□ -0.57
RNU6-1009P-201ENST00000390996 GSE1Q14687 1217 aa11.5□□□□□ -0.57
RNU6-1009P-201ENST00000390996 IRX5P78411 483 aaPredicted RBP11.48□□□□□ -0.57
RNU6-1009P-201ENST00000390996 LCE2DQ5TA82 110 aaPredicted RBP11.48□□□□□ -0.57
RNU6-1009P-201ENST00000390996 IFNLR1Q8IU57 520 aaPredicted RBP11.48□□□□□ -0.57
RNU6-1009P-201ENST00000390996 POTEMA6NI47 508 aa11.47□□□□□ -0.57
RNU6-1009P-201ENST00000390996 CHRM1P11229 460 aaPredicted RBP11.47□□□□□ -0.57
RNU6-1009P-201ENST00000390996 POTEGQ6S5H5 508 aa11.44□□□□□ -0.58
RNU6-1009P-201ENST00000390996 PLCG2P16885 1265 aa11.42□□□□□ -0.58
RNU6-1009P-201ENST00000390996 ZNF467Q7Z7K2 595 aaPredicted RBP11.41□□□□□ -0.58
RNU6-1009P-201ENST00000390996 SPOCK2Q92563 424 aa11.41□□□□□ -0.58
RNU6-1009P-201ENST00000390996 OCEL1Q9H607 264 aa11.39□□□□□ -0.59
RNU6-1009P-201ENST00000390996 FAM163AQ96GL9 167 aaPredicted RBP11.37□□□□□ -0.59
RNU6-1009P-201ENST00000390996 PSEN1P49768 467 aa11.33□□□□□ -0.6
RNU6-1009P-201ENST00000390996 PDCD7Q8N8D1 485 aaKnown RBP11.32□□□□□ -0.6
RNU6-1009P-201ENST00000390996 SLAIN1Q8ND83 568 aa11.32□□□□□ -0.6
RNU6-1009P-201ENST00000390996 PLSCR2Q9NRY7 297 aa11.31□□□□□ -0.6
RNU6-1009P-201ENST00000390996 CIZ1Q9ULV3 898 aaPredicted RBP11.31□□□□□ -0.6
RNU6-1009P-201ENST00000390996 PDAP1Q13442 181 aaKnown RBP11.28□□□□□ -0.6
RNU6-1009P-201ENST00000390996 PCDH10Q9P2E7 1040 aa11.28□□□□□ -0.6
RNU6-1009P-201ENST00000390996 MKRN3Q13064 507 aaKnown RBP11.26□□□□□ -0.61
RNU6-1009P-201ENST00000390996 ILDR1Q86SU0 546 aaPredicted RBP11.26□□□□□ -0.61
RNU6-1009P-201ENST00000390996 GOLGA2Q08379 1002 aa11.24□□□□□ -0.61
RNU6-1009P-201ENST00000390996 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.22□□□□□ -0.61
RNU6-1009P-201ENST00000390996 ST18O60284 1047 aa11.21□□□□□ -0.61
RNU6-1009P-201ENST00000390996 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.21□□□□□ -0.61
RNU6-1009P-201ENST00000390996 TRIM41Q8WV44 630 aa11.19□□□□□ -0.62
RNU6-1009P-201ENST00000390996 CABP2Q9NPB3 220 aa11.18□□□□□ -0.62
RNU6-1009P-201ENST00000390996 L3MBTL3Q96JM7 780 aaPredicted RBP11.17□□□□□ -0.62
RNU6-1009P-201ENST00000390996 DPY19L2Q6NUT2 758 aa11.15□□□□□ -0.62
RNU6-1009P-201ENST00000390996 C3orf67Q6ZVT6 689 aa11.13□□□□□ -0.63
RNU6-1009P-201ENST00000390996 RNF25Q96BH1 459 aaPredicted RBP11.11□□□□□ -0.63
RNU6-1009P-201ENST00000390996 SNPHO15079 494 aa11.1□□□□□ -0.63
RNU6-1009P-201ENST00000390996 CDAN1Q8IWY9 1227 aa11.1□□□□□ -0.63
RNU6-1009P-201ENST00000390996 TMEM121BQ9BXQ6 578 aaPredicted RBP11.09□□□□□ -0.63
RNU6-1009P-201ENST00000390996 BOLA1Q9Y3E2 137 aa11.07□□□□□ -0.64
RNU6-1009P-201ENST00000390996 RIOK3O14730 519 aaKnown RBP11.06□□□□□ -0.64
RNU6-1009P-201ENST00000390996 EFCAB3Q8N7B9 438 aa11.06□□□□□ -0.64
RNU6-1009P-201ENST00000390996 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.01□□□□□ -0.65
RNU6-1009P-201ENST00000390996 MARVELD3Q96A59 401 aa11.01□□□□□ -0.65
RNU6-1009P-201ENST00000390996 ZFP91Q96JP5 570 aaPredicted RBP11.01□□□□□ -0.65
RNU6-1009P-201ENST00000390996 VGFO15240 615 aaPredicted RBP11□□□□□ -0.65
RNU6-1009P-201ENST00000390996 G3V3G9 751 aa10.97□□□□□ -0.65
RNU6-1009P-201ENST00000390996 SOX12O15370 315 aa10.96□□□□□ -0.65
RNU6-1009P-201ENST00000390996 HOXB3P14651 431 aaPredicted RBP10.96□□□□□ -0.65
RNU6-1009P-201ENST00000390996 MS4A4AQ96JQ5 239 aa10.96□□□□□ -0.65
RNU6-1009P-201ENST00000390996 MICALL2Q8IY33 904 aa10.93□□□□□ -0.66
RNU6-1009P-201ENST00000390996 POTEB3A0JP26 581 aa10.92□□□□□ -0.66
RNU6-1009P-201ENST00000390996 EMP3P54852 163 aa10.92□□□□□ -0.66
RNU6-1009P-201ENST00000390996 POTEBQ6S5H4 581 aa10.92□□□□□ -0.66
RNU6-1009P-201ENST00000390996 PHF8Q9UPP1 1060 aa10.92□□□□□ -0.66
RNU6-1009P-201ENST00000390996 TMEM92Q6UXU6 159 aa10.9□□□□□ -0.66
RNU6-1009P-201ENST00000390996 HS3ST6Q96QI5 342 aa10.87□□□□□ -0.67
RNU6-1009P-201ENST00000390996 BCL11BQ9C0K0 894 aaPredicted RBP10.87□□□□□ -0.67
RNU6-1009P-201ENST00000390996 FBXO22Q8NEZ5 403 aa10.86□□□□□ -0.67
RNU6-1009P-201ENST00000390996 FAM205CA6NFA0 338 aa10.85□□□□□ -0.67
RNU6-1009P-201ENST00000390996 PKD2Q13563 968 aa10.85□□□□□ -0.67
RNU6-1009P-201ENST00000390996 SPNS2Q8IVW8 549 aa10.85□□□□□ -0.67
RNU6-1009P-201ENST00000390996 HOXB1P14653 301 aaPredicted RBP10.84□□□□□ -0.67
RNU6-1009P-201ENST00000390996 DOK7Q18PE1 504 aa10.84□□□□□ -0.67
RNU6-1009P-201ENST00000390996 TAOK2Q9UL54 1235 aa10.84□□□□□ -0.67
RNU6-1009P-201ENST00000390996 ECM2O94769 699 aaPredicted RBP10.83□□□□□ -0.68
RNU6-1009P-201ENST00000390996 KRTAP3-3Q9BYR6 98 aa10.83□□□□□ -0.68
RNU6-1009P-201ENST00000390996 KRTAP3-2Q9BYR7 98 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms