RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 AMER1Q5JTC6 1135 aaPredicted RBP16.71■□□□□ 0.27
SNORA40.4-201ENST00000390971 EVX2Q03828 476 aa16.68■□□□□ 0.26
SNORA40.4-201ENST00000390971 CCDC61Q9Y6R9 512 aa16.68■□□□□ 0.26
SNORA40.4-201ENST00000390971 TRIM41Q8WV44 630 aa16.67■□□□□ 0.26
SNORA40.4-201ENST00000390971 ZNF579Q8NAF0 562 aaKnown RBP16.64■□□□□ 0.25
SNORA40.4-201ENST00000390971 PKD2Q13563 968 aa16.62■□□□□ 0.25
SNORA40.4-201ENST00000390971 CHRM1P11229 460 aaPredicted RBP16.6■□□□□ 0.25
SNORA40.4-201ENST00000390971 RTN4Q9NQC3 1192 aaKnown RBP16.59■□□□□ 0.25
SNORA40.4-201ENST00000390971 PYGBP11216 843 aa16.58■□□□□ 0.24
SNORA40.4-201ENST00000390971 PHF12Q96QT6 1004 aa16.57■□□□□ 0.24
SNORA40.4-201ENST00000390971 ECM2O94769 699 aaPredicted RBP16.56■□□□□ 0.24
SNORA40.4-201ENST00000390971 CLCN6P51797 869 aa16.55■□□□□ 0.24
SNORA40.4-201ENST00000390971 KIF12Q96FN5 646 aa16.54■□□□□ 0.24
SNORA40.4-201ENST00000390971 SGIP1Q9BQI5 828 aa16.49■□□□□ 0.23
SNORA40.4-201ENST00000390971 MAP3K13O43283 966 aa16.48■□□□□ 0.23
SNORA40.4-201ENST00000390971 SP7Q8TDD2 431 aaPredicted RBP16.47■□□□□ 0.23
SNORA40.4-201ENST00000390971 PCDHB13Q9Y5F0 798 aa16.45■□□□□ 0.22
SNORA40.4-201ENST00000390971 GABBR2O75899 941 aa16.41■□□□□ 0.22
SNORA40.4-201ENST00000390971 ZNF467Q7Z7K2 595 aaPredicted RBP16.41■□□□□ 0.22
SNORA40.4-201ENST00000390971 MS4A3Q96HJ5 214 aa16.38■□□□□ 0.21
SNORA40.4-201ENST00000390971 RGL2O15211 777 aa16.36■□□□□ 0.21
SNORA40.4-201ENST00000390971 IFNL1Q8IU54 200 aa16.36■□□□□ 0.21
SNORA40.4-201ENST00000390971 RIOK3O14730 519 aaKnown RBP16.35■□□□□ 0.21
SNORA40.4-201ENST00000390971 PCDHB8Q9UN66 801 aa16.35■□□□□ 0.21
SNORA40.4-201ENST00000390971 GALR2O43603 387 aaPredicted RBP16.34■□□□□ 0.21
SNORA40.4-201ENST00000390971 RNF25Q96BH1 459 aaPredicted RBP16.33■□□□□ 0.2
SNORA40.4-201ENST00000390971 TAOK2Q9UL54 1235 aa16.33■□□□□ 0.2
SNORA40.4-201ENST00000390971 VGFO15240 615 aaPredicted RBP16.26■□□□□ 0.19
SNORA40.4-201ENST00000390971 PDAP1Q13442 181 aaKnown RBP16.25■□□□□ 0.19
SNORA40.4-201ENST00000390971 PSEN1P49768 467 aa16.22■□□□□ 0.19
SNORA40.4-201ENST00000390971 DCAF8L2P0C7V8 631 aa16.21■□□□□ 0.19
SNORA40.4-201ENST00000390971 TIE1P35590 1138 aa16.2■□□□□ 0.18
SNORA40.4-201ENST00000390971 TRPC6Q9Y210 931 aa16.2■□□□□ 0.18
SNORA40.4-201ENST00000390971 DCBLD2Q96PD2 775 aa16.19■□□□□ 0.18
SNORA40.4-201ENST00000390971 TMEM106CQ9BVX2 250 aa16.15■□□□□ 0.18
SNORA40.4-201ENST00000390971 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.14■□□□□ 0.17
SNORA40.4-201ENST00000390971 ZFP91Q96JP5 570 aaPredicted RBP16.14■□□□□ 0.17
SNORA40.4-201ENST00000390971 BMP2KQ9NSY1 1161 aaPredicted RBP16.13■□□□□ 0.17
SNORA40.4-201ENST00000390971 TTLL13PA6NNM8 815 aa16.11■□□□□ 0.17
SNORA40.4-201ENST00000390971 ASTLQ6HA08 431 aaPredicted RBP16.1■□□□□ 0.17
SNORA40.4-201ENST00000390971 ATMINO43313 823 aaPredicted RBP16.09■□□□□ 0.17
SNORA40.4-201ENST00000390971 STK25O00506 426 aa16.08■□□□□ 0.16
SNORA40.4-201ENST00000390971 CHGAP10645 457 aaKnown RBP16.08■□□□□ 0.16
SNORA40.4-201ENST00000390971 BCL11BQ9C0K0 894 aaPredicted RBP16.06■□□□□ 0.16
SNORA40.4-201ENST00000390971 HS6ST3Q8IZP7 471 aa16.04■□□□□ 0.16
SNORA40.4-201ENST00000390971 STK24Q9Y6E0 443 aa16.04■□□□□ 0.16
SNORA40.4-201ENST00000390971 ATN1P54259 1190 aaPredicted RBP16.03■□□□□ 0.16
SNORA40.4-201ENST00000390971 POTEIP0CG38 1075 aa16.02■□□□□ 0.16
SNORA40.4-201ENST00000390971 GOLGA2Q08379 1002 aa16.01■□□□□ 0.15
SNORA40.4-201ENST00000390971 TRIM35Q9UPQ4 493 aa16■□□□□ 0.15
SNORA40.4-201ENST00000390971 CABP2Q9NPB3 220 aa15.99■□□□□ 0.15
SNORA40.4-201ENST00000390971 MKRN3Q13064 507 aaKnown RBP15.95■□□□□ 0.14
SNORA40.4-201ENST00000390971 PELP1Q8IZL8 1130 aaKnown RBP15.95■□□□□ 0.14
SNORA40.4-201ENST00000390971 IER5LQ5T953 404 aa15.91■□□□□ 0.14
SNORA40.4-201ENST00000390971 EFCAB3Q8N7B9 438 aa15.91■□□□□ 0.14
SNORA40.4-201ENST00000390971 SLC39A7Q92504 469 aa15.91■□□□□ 0.14
SNORA40.4-201ENST00000390971 DNAJC5Q9H3Z4 198 aa15.91■□□□□ 0.14
SNORA40.4-201ENST00000390971 C7P10643 843 aa15.89■□□□□ 0.13
SNORA40.4-201ENST00000390971 SOX12O15370 315 aa15.88■□□□□ 0.13
SNORA40.4-201ENST00000390971 BBXQ8WY36 941 aaPredicted RBP15.87■□□□□ 0.13
SNORA40.4-201ENST00000390971 METRNQ9UJH8 293 aa15.81■□□□□ 0.12
SNORA40.4-201ENST00000390971 SEC24BO95487 1268 aa15.8■□□□□ 0.12
SNORA40.4-201ENST00000390971 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.8■□□□□ 0.12
SNORA40.4-201ENST00000390971 OCEL1Q9H607 264 aa15.79■□□□□ 0.12
SNORA40.4-201ENST00000390971 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.79■□□□□ 0.12
SNORA40.4-201ENST00000390971 NLRP6P59044 892 aa15.78■□□□□ 0.12
SNORA40.4-201ENST00000390971 IRX5P78411 483 aaPredicted RBP15.78■□□□□ 0.12
SNORA40.4-201ENST00000390971 NKX1-1Q15270 411 aaPredicted RBP15.77■□□□□ 0.12
SNORA40.4-201ENST00000390971 PLCG2P16885 1265 aa15.76■□□□□ 0.11
SNORA40.4-201ENST00000390971 PHF8Q9UPP1 1060 aa15.76■□□□□ 0.11
SNORA40.4-201ENST00000390971 MFRPQ9BY79 579 aa15.75■□□□□ 0.11
SNORA40.4-201ENST00000390971 RYDENQ9NUL5 291 aaKnown RBP15.75■□□□□ 0.11
SNORA40.4-201ENST00000390971 ILDR1Q86SU0 546 aaPredicted RBP15.74■□□□□ 0.11
SNORA40.4-201ENST00000390971 COLQQ9Y215 455 aaPredicted RBP15.72■□□□□ 0.11
SNORA40.4-201ENST00000390971 FBXO22Q8NEZ5 403 aa15.71■□□□□ 0.11
SNORA40.4-201ENST00000390971 POTEFA5A3E0 1075 aa15.68■□□□□ 0.1
SNORA40.4-201ENST00000390971 PDCD7Q8N8D1 485 aaKnown RBP15.67■□□□□ 0.1
SNORA40.4-201ENST00000390971 GTPBP6O43824 516 aaPredicted RBP15.66■□□□□ 0.1
SNORA40.4-201ENST00000390971 SPRYD3Q8NCJ5 442 aa15.66■□□□□ 0.1
SNORA40.4-201ENST00000390971 MS4A4AQ96JQ5 239 aa15.65■□□□□ 0.1
SNORA40.4-201ENST00000390971 PAXIP1Q6ZW49 1069 aaPredicted RBP15.62■□□□□ 0.09
SNORA40.4-201ENST00000390971 DPY19L2Q6NUT2 758 aa15.61■□□□□ 0.09
SNORA40.4-201ENST00000390971 L3MBTL3Q96JM7 780 aaPredicted RBP15.61■□□□□ 0.09
SNORA40.4-201ENST00000390971 CFAP44Q96MT7 982 aa15.59■□□□□ 0.09
SNORA40.4-201ENST00000390971 G3V3G9 751 aa15.56■□□□□ 0.08
SNORA40.4-201ENST00000390971 PPP1R37O75864 691 aa15.53■□□□□ 0.08
SNORA40.4-201ENST00000390971 BOLA1Q9Y3E2 137 aa15.53■□□□□ 0.08
SNORA40.4-201ENST00000390971 POTEB2H3BUK9 544 aa15.52■□□□□ 0.08
SNORA40.4-201ENST00000390971 PLCB2Q00722 1185 aa15.5■□□□□ 0.07
SNORA40.4-201ENST00000390971 LHX8Q68G74 356 aa15.48■□□□□ 0.07
SNORA40.4-201ENST00000390971 MAMSTRQ6ZN01 415 aa15.46■□□□□ 0.07
SNORA40.4-201ENST00000390971 TMEM121BQ9BXQ6 578 aaPredicted RBP15.46■□□□□ 0.07
SNORA40.4-201ENST00000390971 MICALL2Q8IY33 904 aa15.45■□□□□ 0.06
SNORA40.4-201ENST00000390971 POTEJP0CG39 1038 aa15.44■□□□□ 0.06
SNORA40.4-201ENST00000390971 C3orf67Q6ZVT6 689 aa15.41■□□□□ 0.06
SNORA40.4-201ENST00000390971 SCUBE2Q9NQ36 999 aa15.4■□□□□ 0.06
SNORA40.4-201ENST00000390971 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.38■□□□□ 0.05
SNORA40.4-201ENST00000390971 OTUD5Q96G74 571 aa15.29■□□□□ 0.04
SNORA40.4-201ENST00000390971 TSHZ2Q9NRE2 1034 aa15.29■□□□□ 0.04
SNORA40.4-201ENST00000390971 HAP1P54257 671 aaPredicted RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms