RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 MMRN1Q13201 1228 aa6.65□□□□□ -1.34
RNU6-440P-201ENST00000390882 ATMINO43313 823 aaPredicted RBP6.64□□□□□ -1.35
RNU6-440P-201ENST00000390882 SLC4A1APQ9BWU0 796 aaKnown RBP6.61□□□□□ -1.35
RNU6-440P-201ENST00000390882 CREBZFQ9NS37 354 aa6.61□□□□□ -1.35
RNU6-440P-201ENST00000390882 SPNS2Q8IVW8 549 aa6.6□□□□□ -1.35
RNU6-440P-201ENST00000390882 MS4A3Q96HJ5 214 aa6.56□□□□□ -1.36
RNU6-440P-201ENST00000390882 ST18O60284 1047 aa6.53□□□□□ -1.36
RNU6-440P-201ENST00000390882 ATN1P54259 1190 aaPredicted RBP6.53□□□□□ -1.36
RNU6-440P-201ENST00000390882 NPM1P06748 294 aaKnown RBP eCLIP6.52□□□□□ -1.37
RNU6-440P-201ENST00000390882 STAG3Q9UJ98 1225 aa6.52□□□□□ -1.37
RNU6-440P-201ENST00000390882 POTEFA5A3E0 1075 aa6.51□□□□□ -1.37
RNU6-440P-201ENST00000390882 ZBTB22O15209 634 aa6.49□□□□□ -1.37
RNU6-440P-201ENST00000390882 SEC24BO95487 1268 aa6.44□□□□□ -1.38
RNU6-440P-201ENST00000390882 SLAIN1Q8ND83 568 aa6.43□□□□□ -1.38
RNU6-440P-201ENST00000390882 TMEM121BQ9BXQ6 578 aaPredicted RBP6.42□□□□□ -1.38
RNU6-440P-201ENST00000390882 MNX1P50219 401 aaPredicted RBP6.41□□□□□ -1.38
RNU6-440P-201ENST00000390882 BMP2KQ9NSY1 1161 aaPredicted RBP6.41□□□□□ -1.38
RNU6-440P-201ENST00000390882 COLQQ9Y215 455 aaPredicted RBP6.41□□□□□ -1.38
RNU6-440P-201ENST00000390882 TIE1P35590 1138 aa6.38□□□□□ -1.39
RNU6-440P-201ENST00000390882 KIF12Q96FN5 646 aa6.36□□□□□ -1.39
RNU6-440P-201ENST00000390882 SNPHO15079 494 aa6.35□□□□□ -1.39
RNU6-440P-201ENST00000390882 CCDC61Q9Y6R9 512 aa6.35□□□□□ -1.39
RNU6-440P-201ENST00000390882 IER5LQ5T953 404 aa6.34□□□□□ -1.39
RNU6-440P-201ENST00000390882 TSPYL2Q9H2G4 693 aaPredicted RBP6.34□□□□□ -1.39
RNU6-440P-201ENST00000390882 TRPC6Q9Y210 931 aa6.34□□□□□ -1.39
RNU6-440P-201ENST00000390882 MARVELD3Q96A59 401 aa6.33□□□□□ -1.4
RNU6-440P-201ENST00000390882 TTLL13PA6NNM8 815 aa6.31□□□□□ -1.4
RNU6-440P-201ENST00000390882 MAP3K13O43283 966 aa6.28□□□□□ -1.4
RNU6-440P-201ENST00000390882 KRTAP3-3Q9BYR6 98 aa6.27□□□□□ -1.41
RNU6-440P-201ENST00000390882 KRTAP3-2Q9BYR7 98 aa6.27□□□□□ -1.41
RNU6-440P-201ENST00000390882 TRIM35Q9UPQ4 493 aa6.27□□□□□ -1.41
RNU6-440P-201ENST00000390882 EMP3P54852 163 aa6.24□□□□□ -1.41
RNU6-440P-201ENST00000390882 PLCG2P16885 1265 aa6.22□□□□□ -1.41
RNU6-440P-201ENST00000390882 HS3ST6Q96QI5 342 aa6.22□□□□□ -1.41
RNU6-440P-201ENST00000390882 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.21□□□□□ -1.42
RNU6-440P-201ENST00000390882 POTEB3A0JP26 581 aa6.2□□□□□ -1.42
RNU6-440P-201ENST00000390882 FAM205CA6NFA0 338 aa6.2□□□□□ -1.42
RNU6-440P-201ENST00000390882 POTEBQ6S5H4 581 aa6.2□□□□□ -1.42
RNU6-440P-201ENST00000390882 SGIP1Q9BQI5 828 aa6.19□□□□□ -1.42
RNU6-440P-201ENST00000390882 RNF166Q96A37 237 aaPredicted RBP6.18□□□□□ -1.42
RNU6-440P-201ENST00000390882 SPDYE4A6NLX3 237 aa6.16□□□□□ -1.42
RNU6-440P-201ENST00000390882 IRX5P78411 483 aaPredicted RBP6.16□□□□□ -1.42
RNU6-440P-201ENST00000390882 OCEL1Q9H607 264 aa6.14□□□□□ -1.43
RNU6-440P-201ENST00000390882 PCDHB13Q9Y5F0 798 aa6.14□□□□□ -1.43
RNU6-440P-201ENST00000390882 TMEM106CQ9BVX2 250 aa6.12□□□□□ -1.43
RNU6-440P-201ENST00000390882 RASEFQ8IZ41 740 aa6.1□□□□□ -1.43
RNU6-440P-201ENST00000390882 MYT1LQ9UL68 1186 aa6.1□□□□□ -1.43
RNU6-440P-201ENST00000390882 IFNL1Q8IU54 200 aa6.07□□□□□ -1.44
RNU6-440P-201ENST00000390882 PLEKHG5O94827 1062 aa6.05□□□□□ -1.44
RNU6-440P-201ENST00000390882 C3orf67Q6ZVT6 689 aa6.05□□□□□ -1.44
RNU6-440P-201ENST00000390882 PTGER2P43116 358 aa6.01□□□□□ -1.45
RNU6-440P-201ENST00000390882 L3MBTL3Q96JM7 780 aaPredicted RBP6.01□□□□□ -1.45
RNU6-440P-201ENST00000390882 ERBB3P21860 1342 aa6□□□□□ -1.45
RNU6-440P-201ENST00000390882 HOXB1P14653 301 aaPredicted RBP5.98□□□□□ -1.45
RNU6-440P-201ENST00000390882 MIER1Q8N108 512 aa5.98□□□□□ -1.45
RNU6-440P-201ENST00000390882 ZNF710Q8N1W2 664 aa5.95□□□□□ -1.46
RNU6-440P-201ENST00000390882 PDCD7Q8N8D1 485 aaKnown RBP5.95□□□□□ -1.46
RNU6-440P-201ENST00000390882 PLA2G2EQ9NZK7 142 aa5.95□□□□□ -1.46
RNU6-440P-201ENST00000390882 HOXB3P14651 431 aaPredicted RBP5.94□□□□□ -1.46
RNU6-440P-201ENST00000390882 VARS2Q5ST30 1063 aaKnown RBP5.92□□□□□ -1.46
RNU6-440P-201ENST00000390882 ZNF687Q8N1G0 1237 aa5.92□□□□□ -1.46
RNU6-440P-201ENST00000390882 DOK7Q18PE1 504 aa5.9□□□□□ -1.46
RNU6-440P-201ENST00000390882 NUBP1P53384 320 aa5.89□□□□□ -1.47
RNU6-440P-201ENST00000390882 PROM2Q8N271 834 aa5.89□□□□□ -1.47
RNU6-440P-201ENST00000390882 FAM212AQ96EL1 285 aa5.89□□□□□ -1.47
RNU6-440P-201ENST00000390882 MKRN3Q13064 507 aaKnown RBP5.88□□□□□ -1.47
RNU6-440P-201ENST00000390882 GOLGA2Q08379 1002 aa5.87□□□□□ -1.47
RNU6-440P-201ENST00000390882 ANKRD13DQ6ZTN6 518 aa5.87□□□□□ -1.47
RNU6-440P-201ENST00000390882 ZBTB47Q9UFB7 747 aaPredicted RBP5.87□□□□□ -1.47
RNU6-440P-201ENST00000390882 RIMBP2O15034 1052 aa5.86□□□□□ -1.47
RNU6-440P-201ENST00000390882 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.86□□□□□ -1.47
RNU6-440P-201ENST00000390882 HCSTQ9UBK5 93 aa5.84□□□□□ -1.47
RNU6-440P-201ENST00000390882 PCDHB8Q9UN66 801 aa5.84□□□□□ -1.47
RNU6-440P-201ENST00000390882 PLCD3Q8N3E9 789 aa5.83□□□□□ -1.48
RNU6-440P-201ENST00000390882 G3V3G9 751 aa5.82□□□□□ -1.48
RNU6-440P-201ENST00000390882 DCAF8Q5TAQ9 597 aa5.82□□□□□ -1.48
RNU6-440P-201ENST00000390882 ZSWIM6Q9HCJ5 1215 aa5.81□□□□□ -1.48
RNU6-440P-201ENST00000390882 PYGBP11216 843 aa5.8□□□□□ -1.48
RNU6-440P-201ENST00000390882 IRX2Q9BZI1 471 aaPredicted RBP5.8□□□□□ -1.48
RNU6-440P-201ENST00000390882 BOLA1Q9Y3E2 137 aa5.79□□□□□ -1.48
RNU6-440P-201ENST00000390882 RGS20O76081 388 aa5.78□□□□□ -1.48
RNU6-440P-201ENST00000390882 LSM11P83369 360 aaKnown RBP eCLIP5.78□□□□□ -1.48
RNU6-440P-201ENST00000390882 DPY19L2Q6NUT2 758 aa5.78□□□□□ -1.48
RNU6-440P-201ENST00000390882 ILDR1Q86SU0 546 aaPredicted RBP5.78□□□□□ -1.48
RNU6-440P-201ENST00000390882 GPR153Q6NV75 609 aa5.76□□□□□ -1.49
RNU6-440P-201ENST00000390882 ZNF467Q7Z7K2 595 aaPredicted RBP5.74□□□□□ -1.49
RNU6-440P-201ENST00000390882 ZNF316A6NFI3 1004 aaPredicted RBP5.69□□□□□ -1.5
RNU6-440P-201ENST00000390882 PBX2P40425 430 aa5.68□□□□□ -1.5
RNU6-440P-201ENST00000390882 PSEN1P49768 467 aa5.68□□□□□ -1.5
RNU6-440P-201ENST00000390882 ARSIQ5FYB1 569 aa5.67□□□□□ -1.5
RNU6-440P-201ENST00000390882 CSRNP3Q8WYN3 585 aa5.66□□□□□ -1.5
RNU6-440P-201ENST00000390882 IFFO2Q5TF58 517 aa5.64□□□□□ -1.51
RNU6-440P-201ENST00000390882 Q6ZNB5 142 aa5.63□□□□□ -1.51
RNU6-440P-201ENST00000390882 CABP2Q9NPB3 220 aa5.62□□□□□ -1.51
RNU6-440P-201ENST00000390882 CHRM1P11229 460 aaPredicted RBP5.61□□□□□ -1.51
RNU6-440P-201ENST00000390882 ADGRD1Q6QNK2 874 aa5.61□□□□□ -1.51
RNU6-440P-201ENST00000390882 TMEM92Q6UXU6 159 aa5.61□□□□□ -1.51
RNU6-440P-201ENST00000390882 AXIN2Q9Y2T1 843 aa5.61□□□□□ -1.51
RNU6-440P-201ENST00000390882 PDAP1Q13442 181 aaKnown RBP5.6□□□□□ -1.51
RNU6-440P-201ENST00000390882 POTEEQ6S8J3 1075 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 825.4 ms