RNA–Protein interactions for RNA: ENST00000390728.2

MIR548U-201, Transcript of microRNA 548u, humanhuman

BASIC

Gene MIR548U, Length 81 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548U-201ENST00000390728 MAMSTRQ6ZN01 415 aa4.23□□□□□ -1.73
MIR548U-201ENST00000390728 CDAN1Q8IWY9 1227 aa4.23□□□□□ -1.73
MIR548U-201ENST00000390728 SLC39A7Q92504 469 aa4.22□□□□□ -1.73
MIR548U-201ENST00000390728 MS4A3Q96HJ5 214 aa4.22□□□□□ -1.73
MIR548U-201ENST00000390728 MNX1P50219 401 aaPredicted RBP4.21□□□□□ -1.74
MIR548U-201ENST00000390728 MMRN1Q13201 1228 aa4.19□□□□□ -1.74
MIR548U-201ENST00000390728 ATN1P54259 1190 aaPredicted RBP4.18□□□□□ -1.74
MIR548U-201ENST00000390728 SCUBE2Q9NQ36 999 aa4.18□□□□□ -1.74
MIR548U-201ENST00000390728 SPNS2Q8IVW8 549 aa4.16□□□□□ -1.74
MIR548U-201ENST00000390728 PAK3O75914 559 aaPredicted RBP4.15□□□□□ -1.75
MIR548U-201ENST00000390728 ST18O60284 1047 aa4.14□□□□□ -1.75
MIR548U-201ENST00000390728 TRPC6Q9Y210 931 aa4.14□□□□□ -1.75
MIR548U-201ENST00000390728 COLQQ9Y215 455 aaPredicted RBP4.14□□□□□ -1.75
MIR548U-201ENST00000390728 BMP2KQ9NSY1 1161 aaPredicted RBP4.13□□□□□ -1.75
MIR548U-201ENST00000390728 CCDC61Q9Y6R9 512 aa4.11□□□□□ -1.75
MIR548U-201ENST00000390728 STAG3Q9UJ98 1225 aa4.1□□□□□ -1.75
MIR548U-201ENST00000390728 NPM1P06748 294 aaKnown RBP eCLIP4.09□□□□□ -1.75
MIR548U-201ENST00000390728 KIF12Q96FN5 646 aa4.09□□□□□ -1.75
MIR548U-201ENST00000390728 TIE1P35590 1138 aa4.07□□□□□ -1.76
MIR548U-201ENST00000390728 TTLL13PA6NNM8 815 aa4.05□□□□□ -1.76
MIR548U-201ENST00000390728 SLAIN1Q8ND83 568 aa4.04□□□□□ -1.76
MIR548U-201ENST00000390728 TMEM121BQ9BXQ6 578 aaPredicted RBP4.04□□□□□ -1.76
MIR548U-201ENST00000390728 KRTAP3-3Q9BYR6 98 aa4.04□□□□□ -1.76
MIR548U-201ENST00000390728 KRTAP3-2Q9BYR7 98 aa4.04□□□□□ -1.76
MIR548U-201ENST00000390728 MAP3K13O43283 966 aa4.03□□□□□ -1.76
MIR548U-201ENST00000390728 IER5LQ5T953 404 aa4.03□□□□□ -1.76
MIR548U-201ENST00000390728 TSPYL2Q9H2G4 693 aaPredicted RBP4.03□□□□□ -1.76
MIR548U-201ENST00000390728 POTEB3A0JP26 581 aa4.02□□□□□ -1.77
MIR548U-201ENST00000390728 POTEBQ6S5H4 581 aa4.02□□□□□ -1.77
MIR548U-201ENST00000390728 MARVELD3Q96A59 401 aa4.02□□□□□ -1.77
MIR548U-201ENST00000390728 TRIM35Q9UPQ4 493 aa4.01□□□□□ -1.77
MIR548U-201ENST00000390728 SEC24BO95487 1268 aa4□□□□□ -1.77
MIR548U-201ENST00000390728 IRX5P78411 483 aaPredicted RBP3.98□□□□□ -1.77
MIR548U-201ENST00000390728 SPDYE4A6NLX3 237 aa3.97□□□□□ -1.77
MIR548U-201ENST00000390728 RASEFQ8IZ41 740 aa3.97□□□□□ -1.77
MIR548U-201ENST00000390728 HS3ST6Q96QI5 342 aa3.94□□□□□ -1.78
MIR548U-201ENST00000390728 SNPHO15079 494 aa3.93□□□□□ -1.78
MIR548U-201ENST00000390728 EMP3P54852 163 aa3.93□□□□□ -1.78
MIR548U-201ENST00000390728 PROM2Q8N271 834 aa3.93□□□□□ -1.78
MIR548U-201ENST00000390728 SGIP1Q9BQI5 828 aa3.93□□□□□ -1.78
MIR548U-201ENST00000390728 PLCG2P16885 1265 aa3.92□□□□□ -1.78
MIR548U-201ENST00000390728 IFNL1Q8IU54 200 aa3.92□□□□□ -1.78
MIR548U-201ENST00000390728 FAM205CA6NFA0 338 aa3.9□□□□□ -1.79
MIR548U-201ENST00000390728 TMEM106CQ9BVX2 250 aa3.9□□□□□ -1.79
MIR548U-201ENST00000390728 PCDHB13Q9Y5F0 798 aa3.9□□□□□ -1.79
MIR548U-201ENST00000390728 OCEL1Q9H607 264 aa3.89□□□□□ -1.79
MIR548U-201ENST00000390728 EIF2AK3Q9NZJ5 1116 aaKnown RBP3.89□□□□□ -1.79
MIR548U-201ENST00000390728 PDCD7Q8N8D1 485 aaKnown RBP3.88□□□□□ -1.79
MIR548U-201ENST00000390728 RNF166Q96A37 237 aaPredicted RBP3.87□□□□□ -1.79
MIR548U-201ENST00000390728 HOXB3P14651 431 aaPredicted RBP3.85□□□□□ -1.79
MIR548U-201ENST00000390728 NUBP1P53384 320 aa3.85□□□□□ -1.79
MIR548U-201ENST00000390728 MYT1LQ9UL68 1186 aa3.82□□□□□ -1.8
MIR548U-201ENST00000390728 HOXB1P14653 301 aaPredicted RBP3.81□□□□□ -1.8
MIR548U-201ENST00000390728 ILDR1Q86SU0 546 aaPredicted RBP3.81□□□□□ -1.8
MIR548U-201ENST00000390728 C3orf67Q6ZVT6 689 aa3.8□□□□□ -1.8
MIR548U-201ENST00000390728 CSRNP3Q8WYN3 585 aa3.8□□□□□ -1.8
MIR548U-201ENST00000390728 MIER1Q8N108 512 aa3.79□□□□□ -1.8
MIR548U-201ENST00000390728 L3MBTL3Q96JM7 780 aaPredicted RBP3.77□□□□□ -1.81
MIR548U-201ENST00000390728 PCDHB8Q9UN66 801 aa3.77□□□□□ -1.81
MIR548U-201ENST00000390728 ERBB3P21860 1342 aa3.75□□□□□ -1.81
MIR548U-201ENST00000390728 VARS2Q5ST30 1063 aaKnown RBP3.75□□□□□ -1.81
MIR548U-201ENST00000390728 PTGER2P43116 358 aa3.74□□□□□ -1.81
MIR548U-201ENST00000390728 DPY19L2Q6NUT2 758 aa3.74□□□□□ -1.81
MIR548U-201ENST00000390728 ZNF687Q8N1G0 1237 aa3.74□□□□□ -1.81
MIR548U-201ENST00000390728 FAM212AQ96EL1 285 aa3.74□□□□□ -1.81
MIR548U-201ENST00000390728 PLEKHG5O94827 1062 aa3.73□□□□□ -1.81
MIR548U-201ENST00000390728 PYGBP11216 843 aa3.73□□□□□ -1.81
MIR548U-201ENST00000390728 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.72□□□□□ -1.81
MIR548U-201ENST00000390728 PLA2G2EQ9NZK7 142 aa3.71□□□□□ -1.82
MIR548U-201ENST00000390728 DOK7Q18PE1 504 aa3.7□□□□□ -1.82
MIR548U-201ENST00000390728 GPR153Q6NV75 609 aa3.7□□□□□ -1.82
MIR548U-201ENST00000390728 ZNF710Q8N1W2 664 aa3.7□□□□□ -1.82
MIR548U-201ENST00000390728 PLCD3Q8N3E9 789 aa3.7□□□□□ -1.82
MIR548U-201ENST00000390728 MKRN3Q13064 507 aaKnown RBP3.69□□□□□ -1.82
MIR548U-201ENST00000390728 TMEM92Q6UXU6 159 aa3.69□□□□□ -1.82
MIR548U-201ENST00000390728 BOLA1Q9Y3E2 137 aa3.69□□□□□ -1.82
MIR548U-201ENST00000390728 ZBTB47Q9UFB7 747 aaPredicted RBP3.68□□□□□ -1.82
MIR548U-201ENST00000390728 LSM11P83369 360 aaKnown RBP eCLIP3.67□□□□□ -1.82
MIR548U-201ENST00000390728 POTEEQ6S8J3 1075 aa3.67□□□□□ -1.82
MIR548U-201ENST00000390728 ZSWIM6Q9HCJ5 1215 aa3.67□□□□□ -1.82
MIR548U-201ENST00000390728 ANKRD13DQ6ZTN6 518 aa3.66□□□□□ -1.82
MIR548U-201ENST00000390728 ZNF467Q7Z7K2 595 aaPredicted RBP3.66□□□□□ -1.82
MIR548U-201ENST00000390728 PSEN1P49768 467 aa3.65□□□□□ -1.83
MIR548U-201ENST00000390728 DCAF8Q5TAQ9 597 aa3.65□□□□□ -1.83
MIR548U-201ENST00000390728 RIMBP2O15034 1052 aa3.64□□□□□ -1.83
MIR548U-201ENST00000390728 GOLGA2Q08379 1002 aa3.64□□□□□ -1.83
MIR548U-201ENST00000390728 CHRM1P11229 460 aaPredicted RBP3.63□□□□□ -1.83
MIR548U-201ENST00000390728 HCSTQ9UBK5 93 aa3.63□□□□□ -1.83
MIR548U-201ENST00000390728 ZNF316A6NFI3 1004 aaPredicted RBP3.62□□□□□ -1.83
MIR548U-201ENST00000390728 KHSRPQ92945 711 aaKnown RBP eCLIP3.62□□□□□ -1.83
MIR548U-201ENST00000390728 ARSIQ5FYB1 569 aa3.61□□□□□ -1.83
MIR548U-201ENST00000390728 PDAP1Q13442 181 aaKnown RBP3.6□□□□□ -1.83
MIR548U-201ENST00000390728 MICALL2Q8IY33 904 aa3.6□□□□□ -1.83
MIR548U-201ENST00000390728 CABP2Q9NPB3 220 aa3.6□□□□□ -1.83
MIR548U-201ENST00000390728 RGS20O76081 388 aa3.59□□□□□ -1.83
MIR548U-201ENST00000390728 PBX2P40425 430 aa3.59□□□□□ -1.83
MIR548U-201ENST00000390728 G3V3G9 751 aa3.58□□□□□ -1.84
MIR548U-201ENST00000390728 IRX2Q9BZI1 471 aaPredicted RBP3.58□□□□□ -1.84
MIR548U-201ENST00000390728 AXIN2Q9Y2T1 843 aa3.58□□□□□ -1.84
MIR548U-201ENST00000390728 LCE2BO14633 110 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms