RNA–Protein interactions for RNA: ENST00000390485.1

TRAJ53-201, Transcript of T cell receptor alpha joining 53, humanhuman

APPRIS P1 BASIC

Gene TRAJ53, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ53-201ENST00000390485 PABPN1Q86U42 306 aaKnown RBP eCLIP4.32□□□□□ -1.72
TRAJ53-201ENST00000390485 ATN1P54259 1190 aaPredicted RBP4.31□□□□□ -1.72
TRAJ53-201ENST00000390485 MS4A3Q96HJ5 214 aa4.31□□□□□ -1.72
TRAJ53-201ENST00000390485 KRTAP3-3Q9BYR6 98 aa4.31□□□□□ -1.72
TRAJ53-201ENST00000390485 KRTAP3-2Q9BYR7 98 aa4.31□□□□□ -1.72
TRAJ53-201ENST00000390485 PAK3O75914 559 aaPredicted RBP4.3□□□□□ -1.72
TRAJ53-201ENST00000390485 MKRN4PQ13434 485 aaPredicted RBP4.29□□□□□ -1.72
TRAJ53-201ENST00000390485 SLAIN1Q8ND83 568 aa4.28□□□□□ -1.72
TRAJ53-201ENST00000390485 CREBZFQ9NS37 354 aa4.27□□□□□ -1.73
TRAJ53-201ENST00000390485 MARVELD3Q96A59 401 aa4.26□□□□□ -1.73
TRAJ53-201ENST00000390485 COLQQ9Y215 455 aaPredicted RBP4.26□□□□□ -1.73
TRAJ53-201ENST00000390485 KCNA4P22459 653 aa4.22□□□□□ -1.73
TRAJ53-201ENST00000390485 POTEB3A0JP26 581 aa4.21□□□□□ -1.74
TRAJ53-201ENST00000390485 POTEBQ6S5H4 581 aa4.21□□□□□ -1.74
TRAJ53-201ENST00000390485 BMP2KQ9NSY1 1161 aaPredicted RBP4.21□□□□□ -1.74
TRAJ53-201ENST00000390485 SNPHO15079 494 aa4.2□□□□□ -1.74
TRAJ53-201ENST00000390485 RNF166Q96A37 237 aaPredicted RBP4.2□□□□□ -1.74
TRAJ53-201ENST00000390485 SEC24BO95487 1268 aa4.19□□□□□ -1.74
TRAJ53-201ENST00000390485 HS3ST6Q96QI5 342 aa4.18□□□□□ -1.74
TRAJ53-201ENST00000390485 EMP3P54852 163 aa4.17□□□□□ -1.74
TRAJ53-201ENST00000390485 TIE1P35590 1138 aa4.16□□□□□ -1.74
TRAJ53-201ENST00000390485 IER5LQ5T953 404 aa4.16□□□□□ -1.74
TRAJ53-201ENST00000390485 FOXD4L1Q9NU39 408 aa4.16□□□□□ -1.74
TRAJ53-201ENST00000390485 NPM1P06748 294 aaKnown RBP eCLIP4.14□□□□□ -1.75
TRAJ53-201ENST00000390485 MNX1P50219 401 aaPredicted RBP4.14□□□□□ -1.75
TRAJ53-201ENST00000390485 TRPC6Q9Y210 931 aa4.14□□□□□ -1.75
TRAJ53-201ENST00000390485 ATXN8OSP0DMR3 200 aa4.13□□□□□ -1.75
TRAJ53-201ENST00000390485 FAM205CA6NFA0 338 aa4.12□□□□□ -1.75
TRAJ53-201ENST00000390485 MYT1LQ9UL68 1186 aa4.12□□□□□ -1.75
TRAJ53-201ENST00000390485 TTLL13PA6NNM8 815 aa4.11□□□□□ -1.75
TRAJ53-201ENST00000390485 KIF12Q96FN5 646 aa4.11□□□□□ -1.75
TRAJ53-201ENST00000390485 CCDC61Q9Y6R9 512 aa4.1□□□□□ -1.75
TRAJ53-201ENST00000390485 STAG3Q9UJ98 1225 aa4.08□□□□□ -1.76
TRAJ53-201ENST00000390485 TRIM35Q9UPQ4 493 aa4.07□□□□□ -1.76
TRAJ53-201ENST00000390485 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.05□□□□□ -1.76
TRAJ53-201ENST00000390485 MAP3K13O43283 966 aa4.03□□□□□ -1.76
TRAJ53-201ENST00000390485 PLCG2P16885 1265 aa4.03□□□□□ -1.76
TRAJ53-201ENST00000390485 PLA2G2EQ9NZK7 142 aa4.03□□□□□ -1.76
TRAJ53-201ENST00000390485 PTGER2P43116 358 aa4.02□□□□□ -1.77
TRAJ53-201ENST00000390485 IRX5P78411 483 aaPredicted RBP4.02□□□□□ -1.77
TRAJ53-201ENST00000390485 TSPYL2Q9H2G4 693 aaPredicted RBP4.02□□□□□ -1.77
TRAJ53-201ENST00000390485 OCEL1Q9H607 264 aa3.97□□□□□ -1.77
TRAJ53-201ENST00000390485 SGIP1Q9BQI5 828 aa3.95□□□□□ -1.78
TRAJ53-201ENST00000390485 IRX2Q9BZI1 471 aaPredicted RBP3.95□□□□□ -1.78
TRAJ53-201ENST00000390485 RGS20O76081 388 aa3.94□□□□□ -1.78
TRAJ53-201ENST00000390485 HOXB1P14653 301 aaPredicted RBP3.94□□□□□ -1.78
TRAJ53-201ENST00000390485 ERBB3P21860 1342 aa3.94□□□□□ -1.78
TRAJ53-201ENST00000390485 HOXB3P14651 431 aaPredicted RBP3.92□□□□□ -1.78
TRAJ53-201ENST00000390485 LOC100996750A0A140TA64 210 aa3.91□□□□□ -1.78
TRAJ53-201ENST00000390485 ZNF687Q8N1G0 1237 aa3.91□□□□□ -1.78
TRAJ53-201ENST00000390485 KRTAP4-6Q9BYQ5 205 aa3.91□□□□□ -1.78
TRAJ53-201ENST00000390485 C3orf67Q6ZVT6 689 aa3.9□□□□□ -1.79
TRAJ53-201ENST00000390485 TMEM106CQ9BVX2 250 aa3.9□□□□□ -1.79
TRAJ53-201ENST00000390485 HCSTQ9UBK5 93 aa3.9□□□□□ -1.79
TRAJ53-201ENST00000390485 VARS2Q5ST30 1063 aaKnown RBP3.89□□□□□ -1.79
TRAJ53-201ENST00000390485 ZBTB22O15209 634 aa3.88□□□□□ -1.79
TRAJ53-201ENST00000390485 PCDHB13Q9Y5F0 798 aa3.88□□□□□ -1.79
TRAJ53-201ENST00000390485 PDCD7Q8N8D1 485 aaKnown RBP3.86□□□□□ -1.79
TRAJ53-201ENST00000390485 ANKRD13DQ6ZTN6 518 aa3.85□□□□□ -1.79
TRAJ53-201ENST00000390485 IFNL1Q8IU54 200 aa3.85□□□□□ -1.79
TRAJ53-201ENST00000390485 L3MBTL3Q96JM7 780 aaPredicted RBP3.85□□□□□ -1.79
TRAJ53-201ENST00000390485 RASEFQ8IZ41 740 aa3.84□□□□□ -1.79
TRAJ53-201ENST00000390485 ZNF710Q8N1W2 664 aa3.84□□□□□ -1.79
TRAJ53-201ENST00000390485 SLC4A1APQ9BWU0 796 aaKnown RBP3.83□□□□□ -1.8
TRAJ53-201ENST00000390485 LSM11P83369 360 aaKnown RBP eCLIP3.82□□□□□ -1.8
TRAJ53-201ENST00000390485 DOK7Q18PE1 504 aa3.81□□□□□ -1.8
TRAJ53-201ENST00000390485 IFFO2Q5TF58 517 aa3.81□□□□□ -1.8
TRAJ53-201ENST00000390485 Q6ZNB5 142 aa3.81□□□□□ -1.8
TRAJ53-201ENST00000390485 LCE2BO14633 110 aa3.78□□□□□ -1.8
TRAJ53-201ENST00000390485 ZSWIM6Q9HCJ5 1215 aa3.77□□□□□ -1.81
TRAJ53-201ENST00000390485 RIMBP2O15034 1052 aa3.76□□□□□ -1.81
TRAJ53-201ENST00000390485 A0A0G2JS52 829 aa3.75□□□□□ -1.81
TRAJ53-201ENST00000390485 GPR153Q6NV75 609 aa3.75□□□□□ -1.81
TRAJ53-201ENST00000390485 ILDR1Q86SU0 546 aaPredicted RBP3.73□□□□□ -1.81
TRAJ53-201ENST00000390485 TRAF7Q6Q0C0 670 aa3.72□□□□□ -1.81
TRAJ53-201ENST00000390485 SPDYE4A6NLX3 237 aa3.71□□□□□ -1.82
TRAJ53-201ENST00000390485 PBX2P40425 430 aa3.71□□□□□ -1.82
TRAJ53-201ENST00000390485 ZNF775Q96BV0 537 aaPredicted RBP3.71□□□□□ -1.82
TRAJ53-201ENST00000390485 POTEEQ6S8J3 1075 aa3.7□□□□□ -1.82
TRAJ53-201ENST00000390485 LAPTM4AQ15012 233 aa3.69□□□□□ -1.82
TRAJ53-201ENST00000390485 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.69□□□□□ -1.82
TRAJ53-201ENST00000390485 ZNF316A6NFI3 1004 aaPredicted RBP3.68□□□□□ -1.82
TRAJ53-201ENST00000390485 MKRN3Q13064 507 aaKnown RBP3.67□□□□□ -1.82
TRAJ53-201ENST00000390485 DPY19L2Q6NUT2 758 aa3.67□□□□□ -1.82
TRAJ53-201ENST00000390485 BOLA1Q9Y3E2 137 aa3.67□□□□□ -1.82
TRAJ53-201ENST00000390485 NUBP1P53384 320 aa3.66□□□□□ -1.82
TRAJ53-201ENST00000390485 ADGRD1Q6QNK2 874 aa3.66□□□□□ -1.82
TRAJ53-201ENST00000390485 HRO43593 1189 aa3.65□□□□□ -1.83
TRAJ53-201ENST00000390485 ZNF787Q6DD87 383 aa3.65□□□□□ -1.83
TRAJ53-201ENST00000390485 PLEKHG5O94827 1062 aa3.63□□□□□ -1.83
TRAJ53-201ENST00000390485 ARSIQ5FYB1 569 aa3.63□□□□□ -1.83
TRAJ53-201ENST00000390485 PCDHB8Q9UN66 801 aa3.63□□□□□ -1.83
TRAJ53-201ENST00000390485 AXIN2Q9Y2T1 843 aa3.63□□□□□ -1.83
TRAJ53-201ENST00000390485 G3V3G9 751 aa3.62□□□□□ -1.83
TRAJ53-201ENST00000390485 TK2O00142 265 aa3.62□□□□□ -1.83
TRAJ53-201ENST00000390485 GOLGA2Q08379 1002 aa3.62□□□□□ -1.83
TRAJ53-201ENST00000390485 DCAF8Q5TAQ9 597 aa3.62□□□□□ -1.83
TRAJ53-201ENST00000390485 KCTD12Q96CX2 325 aaKnown RBP3.62□□□□□ -1.83
TRAJ53-201ENST00000390485 LCE2AQ5TA79 106 aaPredicted RBP3.6□□□□□ -1.83
TRAJ53-201ENST00000390485 MIER1Q8N108 512 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms