RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 PLEKHG5O94827 1062 aa5.43□□□□□ -1.54
TRAV41-201ENST00000390468 METRNQ9UJH8 293 aa5.43□□□□□ -1.54
TRAV41-201ENST00000390468 ATMINO43313 823 aaPredicted RBP5.4□□□□□ -1.54
TRAV41-201ENST00000390468 PLCD3Q8N3E9 789 aa5.4□□□□□ -1.54
TRAV41-201ENST00000390468 ASTLQ6HA08 431 aaPredicted RBP5.39□□□□□ -1.55
TRAV41-201ENST00000390468 SLC39A7Q92504 469 aa5.39□□□□□ -1.55
TRAV41-201ENST00000390468 CCDC61Q9Y6R9 512 aa5.39□□□□□ -1.55
TRAV41-201ENST00000390468 ATN1P54259 1190 aaPredicted RBP5.38□□□□□ -1.55
TRAV41-201ENST00000390468 PROM2Q8N271 834 aa5.38□□□□□ -1.55
TRAV41-201ENST00000390468 TRPC6Q9Y210 931 aa5.38□□□□□ -1.55
TRAV41-201ENST00000390468 C7P10643 843 aa5.37□□□□□ -1.55
TRAV41-201ENST00000390468 RASEFQ8IZ41 740 aa5.37□□□□□ -1.55
TRAV41-201ENST00000390468 KIF12Q96FN5 646 aa5.37□□□□□ -1.55
TRAV41-201ENST00000390468 POTEMA6NI47 508 aa5.36□□□□□ -1.55
TRAV41-201ENST00000390468 MAP3K13O43283 966 aa5.36□□□□□ -1.55
TRAV41-201ENST00000390468 POTEGQ6S5H5 508 aa5.35□□□□□ -1.55
TRAV41-201ENST00000390468 BMP2KQ9NSY1 1161 aaPredicted RBP5.35□□□□□ -1.55
TRAV41-201ENST00000390468 POTEJP0CG39 1038 aa5.34□□□□□ -1.55
TRAV41-201ENST00000390468 SEC24BO95487 1268 aa5.33□□□□□ -1.56
TRAV41-201ENST00000390468 FAM163AQ96GL9 167 aaPredicted RBP5.33□□□□□ -1.56
TRAV41-201ENST00000390468 SCUBE2Q9NQ36 999 aa5.33□□□□□ -1.56
TRAV41-201ENST00000390468 FKBP8Q14318 412 aa5.32□□□□□ -1.56
TRAV41-201ENST00000390468 MAMSTRQ6ZN01 415 aa5.32□□□□□ -1.56
TRAV41-201ENST00000390468 PCDHB13Q9Y5F0 798 aa5.31□□□□□ -1.56
TRAV41-201ENST00000390468 TTLL13PA6NNM8 815 aa5.3□□□□□ -1.56
TRAV41-201ENST00000390468 POTEFA5A3E0 1075 aa5.29□□□□□ -1.56
TRAV41-201ENST00000390468 TIE1P35590 1138 aa5.29□□□□□ -1.56
TRAV41-201ENST00000390468 TRIM35Q9UPQ4 493 aa5.29□□□□□ -1.56
TRAV41-201ENST00000390468 FAM212AQ96EL1 285 aa5.28□□□□□ -1.56
TRAV41-201ENST00000390468 ZBTB47Q9UFB7 747 aaPredicted RBP5.28□□□□□ -1.56
TRAV41-201ENST00000390468 COLQQ9Y215 455 aaPredicted RBP5.28□□□□□ -1.56
TRAV41-201ENST00000390468 IFNL1Q8IU54 200 aa5.27□□□□□ -1.57
TRAV41-201ENST00000390468 NUBP1P53384 320 aa5.26□□□□□ -1.57
TRAV41-201ENST00000390468 DCAF8Q5TAQ9 597 aa5.26□□□□□ -1.57
TRAV41-201ENST00000390468 TMEM106CQ9BVX2 250 aa5.26□□□□□ -1.57
TRAV41-201ENST00000390468 PYGBP11216 843 aa5.25□□□□□ -1.57
TRAV41-201ENST00000390468 PLCG2P16885 1265 aa5.23□□□□□ -1.57
TRAV41-201ENST00000390468 LCE2DQ5TA82 110 aaPredicted RBP5.23□□□□□ -1.57
TRAV41-201ENST00000390468 SLAIN1Q8ND83 568 aa5.22□□□□□ -1.57
TRAV41-201ENST00000390468 IER5LQ5T953 404 aa5.21□□□□□ -1.58
TRAV41-201ENST00000390468 KLHL34Q8N239 644 aa5.21□□□□□ -1.58
TRAV41-201ENST00000390468 SGIP1Q9BQI5 828 aa5.21□□□□□ -1.58
TRAV41-201ENST00000390468 PCDHB8Q9UN66 801 aa5.21□□□□□ -1.58
TRAV41-201ENST00000390468 PCDH10Q9P2E7 1040 aa5.18□□□□□ -1.58
TRAV41-201ENST00000390468 FBXO3Q9UK99 471 aa5.18□□□□□ -1.58
TRAV41-201ENST00000390468 CDAN1Q8IWY9 1227 aa5.17□□□□□ -1.58
TRAV41-201ENST00000390468 ST18O60284 1047 aa5.15□□□□□ -1.59
TRAV41-201ENST00000390468 IRX5P78411 483 aaPredicted RBP5.15□□□□□ -1.59
TRAV41-201ENST00000390468 GOLGA2Q08379 1002 aa5.15□□□□□ -1.59
TRAV41-201ENST00000390468 VASPP50552 380 aaPredicted RBP5.14□□□□□ -1.59
TRAV41-201ENST00000390468 OCEL1Q9H607 264 aa5.14□□□□□ -1.59
TRAV41-201ENST00000390468 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.13□□□□□ -1.59
TRAV41-201ENST00000390468 MKRN3Q13064 507 aaKnown RBP5.12□□□□□ -1.59
TRAV41-201ENST00000390468 GSE1Q14687 1217 aa5.12□□□□□ -1.59
TRAV41-201ENST00000390468 C3orf67Q6ZVT6 689 aa5.11□□□□□ -1.59
TRAV41-201ENST00000390468 MARVELD3Q96A59 401 aa5.11□□□□□ -1.59
TRAV41-201ENST00000390468 CIZ1Q9ULV3 898 aaPredicted RBP5.11□□□□□ -1.59
TRAV41-201ENST00000390468 ZNF467Q7Z7K2 595 aaPredicted RBP5.1□□□□□ -1.59
TRAV41-201ENST00000390468 PSEN1P49768 467 aa5.09□□□□□ -1.59
TRAV41-201ENST00000390468 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.09□□□□□ -1.59
TRAV41-201ENST00000390468 SNPHO15079 494 aa5.08□□□□□ -1.6
TRAV41-201ENST00000390468 PDCD7Q8N8D1 485 aaKnown RBP5.07□□□□□ -1.6
TRAV41-201ENST00000390468 EMP3P54852 163 aa5.06□□□□□ -1.6
TRAV41-201ENST00000390468 CABP2Q9NPB3 220 aa5.06□□□□□ -1.6
TRAV41-201ENST00000390468 G3V3G9 751 aa5.05□□□□□ -1.6
TRAV41-201ENST00000390468 DPY19L2Q6NUT2 758 aa5.05□□□□□ -1.6
TRAV41-201ENST00000390468 L3MBTL3Q96JM7 780 aaPredicted RBP5.05□□□□□ -1.6
TRAV41-201ENST00000390468 TMEM121BQ9BXQ6 578 aaPredicted RBP5.05□□□□□ -1.6
TRAV41-201ENST00000390468 PDAP1Q13442 181 aaKnown RBP5.04□□□□□ -1.6
TRAV41-201ENST00000390468 SPOCK2Q92563 424 aa5.04□□□□□ -1.6
TRAV41-201ENST00000390468 IFNLR1Q8IU57 520 aaPredicted RBP5.03□□□□□ -1.6
TRAV41-201ENST00000390468 FAM205CA6NFA0 338 aa5.02□□□□□ -1.61
TRAV41-201ENST00000390468 CHRM1P11229 460 aaPredicted RBP5.01□□□□□ -1.61
TRAV41-201ENST00000390468 MMRN1Q13201 1228 aa5.01□□□□□ -1.61
TRAV41-201ENST00000390468 SPNS2Q8IVW8 549 aa5.01□□□□□ -1.61
TRAV41-201ENST00000390468 HS3ST6Q96QI5 342 aa5□□□□□ -1.61
TRAV41-201ENST00000390468 BOLA1Q9Y3E2 137 aa5□□□□□ -1.61
TRAV41-201ENST00000390468 ZNF710Q8N1W2 664 aa4.98□□□□□ -1.61
TRAV41-201ENST00000390468 POTEB3A0JP26 581 aa4.97□□□□□ -1.61
TRAV41-201ENST00000390468 POTEBQ6S5H4 581 aa4.97□□□□□ -1.61
TRAV41-201ENST00000390468 EFCAB3Q8N7B9 438 aa4.97□□□□□ -1.61
TRAV41-201ENST00000390468 KRTAP3-3Q9BYR6 98 aa4.95□□□□□ -1.62
TRAV41-201ENST00000390468 KRTAP3-2Q9BYR7 98 aa4.95□□□□□ -1.62
TRAV41-201ENST00000390468 ERBB3P21860 1342 aa4.95□□□□□ -1.62
TRAV41-201ENST00000390468 HOXB3P14651 431 aaPredicted RBP4.94□□□□□ -1.62
TRAV41-201ENST00000390468 ILDR1Q86SU0 546 aaPredicted RBP4.93□□□□□ -1.62
TRAV41-201ENST00000390468 CCDC180Q9P1Z9 1646 aa4.93□□□□□ -1.62
TRAV41-201ENST00000390468 DOK7Q18PE1 504 aa4.92□□□□□ -1.62
TRAV41-201ENST00000390468 RIMBP2O15034 1052 aa4.91□□□□□ -1.62
TRAV41-201ENST00000390468 VARS2Q5ST30 1063 aaKnown RBP4.91□□□□□ -1.62
TRAV41-201ENST00000390468 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.9□□□□□ -1.63
TRAV41-201ENST00000390468 RIOK3O14730 519 aaKnown RBP4.9□□□□□ -1.63
TRAV41-201ENST00000390468 HOXB1P14653 301 aaPredicted RBP4.9□□□□□ -1.63
TRAV41-201ENST00000390468 MICALL2Q8IY33 904 aa4.9□□□□□ -1.63
TRAV41-201ENST00000390468 TRIM41Q8WV44 630 aa4.9□□□□□ -1.63
TRAV41-201ENST00000390468 ZFP91Q96JP5 570 aaPredicted RBP4.9□□□□□ -1.63
TRAV41-201ENST00000390468 PHF8Q9UPP1 1060 aa4.9□□□□□ -1.63
TRAV41-201ENST00000390468 TMEM92Q6UXU6 159 aa4.88□□□□□ -1.63
TRAV41-201ENST00000390468 RNF25Q96BH1 459 aaPredicted RBP4.88□□□□□ -1.63
TRAV41-201ENST00000390468 MS4A4AQ96JQ5 239 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms