RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 IFNLR1Q8IU57 520 aaPredicted RBP11.21□□□□□ -0.61
TRAV40-201ENST00000390467 KLHL34Q8N239 644 aa11.19□□□□□ -0.62
TRAV40-201ENST00000390467 POTEIP0CG38 1075 aa11.17□□□□□ -0.62
TRAV40-201ENST00000390467 CLCN6P51797 869 aa11.17□□□□□ -0.62
TRAV40-201ENST00000390467 MS4A3Q96HJ5 214 aa11.16□□□□□ -0.62
TRAV40-201ENST00000390467 FAM212AQ96EL1 285 aa11.14□□□□□ -0.63
TRAV40-201ENST00000390467 KIF12Q96FN5 646 aa11.14□□□□□ -0.63
TRAV40-201ENST00000390467 MAP3K13O43283 966 aa11.1□□□□□ -0.63
TRAV40-201ENST00000390467 DCAF8Q5TAQ9 597 aa11.07□□□□□ -0.64
TRAV40-201ENST00000390467 SPOCK2Q92563 424 aa11.07□□□□□ -0.64
TRAV40-201ENST00000390467 DCBLD2Q96PD2 775 aa11.07□□□□□ -0.64
TRAV40-201ENST00000390467 TRPC6Q9Y210 931 aa11.04□□□□□ -0.64
TRAV40-201ENST00000390467 PYGBP11216 843 aa11.02□□□□□ -0.65
TRAV40-201ENST00000390467 PCDHB13Q9Y5F0 798 aa11.01□□□□□ -0.65
TRAV40-201ENST00000390467 GSE1Q14687 1217 aa10.99□□□□□ -0.65
TRAV40-201ENST00000390467 IFNL1Q8IU54 200 aa10.99□□□□□ -0.65
TRAV40-201ENST00000390467 PELP1Q8IZL8 1130 aaKnown RBP10.98□□□□□ -0.65
TRAV40-201ENST00000390467 ASTLQ6HA08 431 aaPredicted RBP10.97□□□□□ -0.65
TRAV40-201ENST00000390467 ATMINO43313 823 aaPredicted RBP10.96□□□□□ -0.65
TRAV40-201ENST00000390467 SGIP1Q9BQI5 828 aa10.96□□□□□ -0.65
TRAV40-201ENST00000390467 BMP2KQ9NSY1 1161 aaPredicted RBP10.96□□□□□ -0.65
TRAV40-201ENST00000390467 CIZ1Q9ULV3 898 aaPredicted RBP10.95□□□□□ -0.66
TRAV40-201ENST00000390467 ATN1P54259 1190 aaPredicted RBP10.93□□□□□ -0.66
TRAV40-201ENST00000390467 PCDHB8Q9UN66 801 aa10.92□□□□□ -0.66
TRAV40-201ENST00000390467 TIE1P35590 1138 aa10.91□□□□□ -0.66
TRAV40-201ENST00000390467 TTLL13PA6NNM8 815 aa10.9□□□□□ -0.66
TRAV40-201ENST00000390467 CHRM1P11229 460 aaPredicted RBP10.89□□□□□ -0.67
TRAV40-201ENST00000390467 LHX8Q68G74 356 aa10.84□□□□□ -0.67
TRAV40-201ENST00000390467 TMEM106CQ9BVX2 250 aa10.84□□□□□ -0.67
TRAV40-201ENST00000390467 METRNQ9UJH8 293 aa10.84□□□□□ -0.67
TRAV40-201ENST00000390467 ZNF467Q7Z7K2 595 aaPredicted RBP10.82□□□□□ -0.68
TRAV40-201ENST00000390467 SLC39A7Q92504 469 aa10.82□□□□□ -0.68
TRAV40-201ENST00000390467 TRIM35Q9UPQ4 493 aa10.82□□□□□ -0.68
TRAV40-201ENST00000390467 POTEB2H3BUK9 544 aa10.81□□□□□ -0.68
TRAV40-201ENST00000390467 POTEFA5A3E0 1075 aa10.79□□□□□ -0.68
TRAV40-201ENST00000390467 C7P10643 843 aa10.79□□□□□ -0.68
TRAV40-201ENST00000390467 TRIM41Q8WV44 630 aa10.77□□□□□ -0.69
TRAV40-201ENST00000390467 RNF25Q96BH1 459 aaPredicted RBP10.77□□□□□ -0.69
TRAV40-201ENST00000390467 PSEN1P49768 467 aa10.75□□□□□ -0.69
TRAV40-201ENST00000390467 COLQQ9Y215 455 aaPredicted RBP10.74□□□□□ -0.69
TRAV40-201ENST00000390467 PDAP1Q13442 181 aaKnown RBP10.73□□□□□ -0.69
TRAV40-201ENST00000390467 PKD2Q13563 968 aa10.73□□□□□ -0.69
TRAV40-201ENST00000390467 POTEJP0CG39 1038 aa10.72□□□□□ -0.69
TRAV40-201ENST00000390467 IER5LQ5T953 404 aa10.72□□□□□ -0.69
TRAV40-201ENST00000390467 RIOK3O14730 519 aaKnown RBP10.67□□□□□ -0.7
TRAV40-201ENST00000390467 SEC24BO95487 1268 aa10.67□□□□□ -0.7
TRAV40-201ENST00000390467 IRX5P78411 483 aaPredicted RBP10.67□□□□□ -0.7
TRAV40-201ENST00000390467 OTUD5Q96G74 571 aa10.67□□□□□ -0.7
TRAV40-201ENST00000390467 ECM2O94769 699 aaPredicted RBP10.66□□□□□ -0.7
TRAV40-201ENST00000390467 CABP2Q9NPB3 220 aa10.63□□□□□ -0.71
TRAV40-201ENST00000390467 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.62□□□□□ -0.71
TRAV40-201ENST00000390467 RGL2O15211 777 aa10.62□□□□□ -0.71
TRAV40-201ENST00000390467 ZFP91Q96JP5 570 aaPredicted RBP10.62□□□□□ -0.71
TRAV40-201ENST00000390467 PLCG2P16885 1265 aa10.61□□□□□ -0.71
TRAV40-201ENST00000390467 VGFO15240 615 aaPredicted RBP10.6□□□□□ -0.71
TRAV40-201ENST00000390467 GOLGA2Q08379 1002 aa10.6□□□□□ -0.71
TRAV40-201ENST00000390467 MKRN3Q13064 507 aaKnown RBP10.59□□□□□ -0.71
TRAV40-201ENST00000390467 PDCD7Q8N8D1 485 aaKnown RBP10.59□□□□□ -0.71
TRAV40-201ENST00000390467 OCEL1Q9H607 264 aa10.58□□□□□ -0.72
TRAV40-201ENST00000390467 ILDR1Q86SU0 546 aaPredicted RBP10.55□□□□□ -0.72
TRAV40-201ENST00000390467 EFCAB3Q8N7B9 438 aa10.55□□□□□ -0.72
TRAV40-201ENST00000390467 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.55□□□□□ -0.72
TRAV40-201ENST00000390467 MAMSTRQ6ZN01 415 aa10.53□□□□□ -0.72
TRAV40-201ENST00000390467 BCL11BQ9C0K0 894 aaPredicted RBP10.52□□□□□ -0.73
TRAV40-201ENST00000390467 DPY19L2Q6NUT2 758 aa10.51□□□□□ -0.73
TRAV40-201ENST00000390467 SCUBE2Q9NQ36 999 aa10.51□□□□□ -0.73
TRAV40-201ENST00000390467 STK25O00506 426 aa10.48□□□□□ -0.73
TRAV40-201ENST00000390467 STK24Q9Y6E0 443 aa10.48□□□□□ -0.73
TRAV40-201ENST00000390467 TAOK2Q9UL54 1235 aa10.46□□□□□ -0.73
TRAV40-201ENST00000390467 MS4A4AQ96JQ5 239 aa10.44□□□□□ -0.74
TRAV40-201ENST00000390467 PHF8Q9UPP1 1060 aa10.44□□□□□ -0.74
TRAV40-201ENST00000390467 SOX12O15370 315 aa10.42□□□□□ -0.74
TRAV40-201ENST00000390467 SLAIN1Q8ND83 568 aa10.4□□□□□ -0.74
TRAV40-201ENST00000390467 L3MBTL3Q96JM7 780 aaPredicted RBP10.4□□□□□ -0.74
TRAV40-201ENST00000390467 FBXO22Q8NEZ5 403 aa10.39□□□□□ -0.75
TRAV40-201ENST00000390467 MFRPQ9BY79 579 aa10.39□□□□□ -0.75
TRAV40-201ENST00000390467 BOLA1Q9Y3E2 137 aa10.38□□□□□ -0.75
TRAV40-201ENST00000390467 C3orf67Q6ZVT6 689 aa10.37□□□□□ -0.75
TRAV40-201ENST00000390467 HS6ST3Q8IZP7 471 aa10.37□□□□□ -0.75
TRAV40-201ENST00000390467 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.36□□□□□ -0.75
TRAV40-201ENST00000390467 LCE2DQ5TA82 110 aaPredicted RBP10.35□□□□□ -0.75
TRAV40-201ENST00000390467 CHGAP10645 457 aaKnown RBP10.34□□□□□ -0.75
TRAV40-201ENST00000390467 NLRP6P59044 892 aa10.34□□□□□ -0.75
TRAV40-201ENST00000390467 TMEM121BQ9BXQ6 578 aaPredicted RBP10.34□□□□□ -0.75
TRAV40-201ENST00000390467 MICALL2Q8IY33 904 aa10.33□□□□□ -0.76
TRAV40-201ENST00000390467 G3V3G9 751 aa10.3□□□□□ -0.76
TRAV40-201ENST00000390467 RTN4Q9NQC3 1192 aaKnown RBP10.28□□□□□ -0.76
TRAV40-201ENST00000390467 NKX1-1Q15270 411 aaPredicted RBP10.27□□□□□ -0.77
TRAV40-201ENST00000390467 TMEM92Q6UXU6 159 aa10.27□□□□□ -0.77
TRAV40-201ENST00000390467 FAM163AQ96GL9 167 aaPredicted RBP10.27□□□□□ -0.77
TRAV40-201ENST00000390467 DCAF8L2P0C7V8 631 aa10.25□□□□□ -0.77
TRAV40-201ENST00000390467 PPP1R37O75864 691 aa10.24□□□□□ -0.77
TRAV40-201ENST00000390467 DNAJC5Q9H3Z4 198 aa10.24□□□□□ -0.77
TRAV40-201ENST00000390467 AMER1Q5JTC6 1135 aaPredicted RBP10.23□□□□□ -0.77
TRAV40-201ENST00000390467 ST18O60284 1047 aa10.21□□□□□ -0.77
TRAV40-201ENST00000390467 POTEMA6NI47 508 aa10.2□□□□□ -0.78
TRAV40-201ENST00000390467 POTEGQ6S5H5 508 aa10.2□□□□□ -0.78
TRAV40-201ENST00000390467 HOXB3P14651 431 aaPredicted RBP10.17□□□□□ -0.78
TRAV40-201ENST00000390467 SNPHO15079 494 aa10.16□□□□□ -0.78
TRAV40-201ENST00000390467 KIF3CO14782 793 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms