RNA–Protein interactions for RNA: ENST00000389858.4

LGR4-202, Transcript of leucine rich repeat containing G protein-coupled receptor 4, humanhuman

TSL 1 (best) BASIC

Gene LGR4, Length 5,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR4-202ENST00000389858 CEP162Q5TB80 1403 aa27.72■■■□□ 2.03
LGR4-202ENST00000389858 HIRIP3Q9BW71 556 aaPredicted RBP27.7■■■□□ 2.03
LGR4-202ENST00000389858 BAZ1BQ9UIG0 1483 aaKnown RBP27.68■■■□□ 2.02
LGR4-202ENST00000389858 ANP32BQ92688 251 aaKnown RBP27.64■■■□□ 2.02
LGR4-202ENST00000389858 NACADO15069 1562 aa27.63■■■□□ 2.01
LGR4-202ENST00000389858 KIF27Q86VH2 1401 aa27.62■■■□□ 2.01
LGR4-202ENST00000389858 MIER1Q8N108 512 aa27.61■■■□□ 2.01
LGR4-202ENST00000389858 PPP1R15AO75807 674 aaPredicted RBP27.58■■■□□ 2.01
LGR4-202ENST00000389858 CFDP1Q9UEE9 299 aaPredicted RBP27.57■■■□□ 2
LGR4-202ENST00000389858 RGL3Q3MIN7 710 aa27.54■■■□□ 2
LGR4-202ENST00000389858 SCAF1Q9H7N4 1312 aaKnown RBP27.54■■■□□ 2
LGR4-202ENST00000389858 TNIKQ9UKE5 1360 aa27.51■■□□□ 1.99
LGR4-202ENST00000389858 SENP3Q9H4L4 574 aaPredicted RBP27.51■■□□□ 1.99
LGR4-202ENST00000389858 MYO15BQ96JP2 1530 aa27.51■■□□□ 1.99
LGR4-202ENST00000389858 CEP164Q9UPV0 1460 aa27.51■■□□□ 1.99
LGR4-202ENST00000389858 MYH16Q9H6N6 1097 aa27.45■■□□□ 1.99
LGR4-202ENST00000389858 IRX6P78412 446 aaPredicted RBP27.45■■□□□ 1.98
LGR4-202ENST00000389858 C14orf37Q86TY3 774 aa27.41■■□□□ 1.98
LGR4-202ENST00000389858 CDCA8Q53HL2 280 aa27.41■■□□□ 1.98
LGR4-202ENST00000389858 ZBTB7CA1YPR0 619 aa27.39■■□□□ 1.97
LGR4-202ENST00000389858 CFAP53Q96M91 514 aa27.35■■□□□ 1.97
LGR4-202ENST00000389858 CARD11Q9BXL7 1154 aa27.35■■□□□ 1.97
LGR4-202ENST00000389858 A0A0G2JS52 829 aa27.34■■□□□ 1.97
LGR4-202ENST00000389858 PLEKHG5O94827 1062 aa27.34■■□□□ 1.97
LGR4-202ENST00000389858 KNSTRNQ9Y448 316 aa27.34■■□□□ 1.97
LGR4-202ENST00000389858 BAZ1AQ9NRL2 1556 aaPredicted RBP27.33■■□□□ 1.97
LGR4-202ENST00000389858 ARID4BQ4LE39 1312 aaPredicted RBP27.33■■□□□ 1.97
LGR4-202ENST00000389858 ERCC6Q03468 1493 aa27.3■■□□□ 1.96
LGR4-202ENST00000389858 NBR1Q14596 966 aa27.26■■□□□ 1.95
LGR4-202ENST00000389858 SIN3AQ96ST3 1273 aa27.2■■□□□ 1.94
LGR4-202ENST00000389858 FHAD1B1AJZ9 1412 aa27.2■■□□□ 1.94
LGR4-202ENST00000389858 CCNB3Q8WWL7 1395 aa27.2■■□□□ 1.94
LGR4-202ENST00000389858 PPM1GO15355 546 aaPredicted RBP27.19■■□□□ 1.94
LGR4-202ENST00000389858 CECR2Q9BXF3 1484 aa27.18■■□□□ 1.94
LGR4-202ENST00000389858 EIF5BO60841 1220 aaKnown RBP27.17■■□□□ 1.94
LGR4-202ENST00000389858 CARMIL1Q5VZK9 1371 aa27.16■■□□□ 1.94
LGR4-202ENST00000389858 SENP3-EIF4A1A0A087X0R7 540 aa27.16■■□□□ 1.94
LGR4-202ENST00000389858 ARXQ96QS3 562 aa27.15■■□□□ 1.94
LGR4-202ENST00000389858 POGKQ9P215 609 aa27.13■■□□□ 1.93
LGR4-202ENST00000389858 HAP1P54257 671 aaPredicted RBP27.13■■□□□ 1.93
LGR4-202ENST00000389858 CUX2O14529 1486 aa27.12■■□□□ 1.93
LGR4-202ENST00000389858 BECN1Q14457 450 aa27.11■■□□□ 1.93
LGR4-202ENST00000389858 MAPK8IP3Q9UPT6 1336 aa27.09■■□□□ 1.93
LGR4-202ENST00000389858 NUDCQ9Y266 331 aa27.09■■□□□ 1.93
LGR4-202ENST00000389858 DDRGK1Q96HY6 314 aa27.08■■□□□ 1.93
LGR4-202ENST00000389858 NEUROD2Q15784 382 aa27.07■■□□□ 1.92
LGR4-202ENST00000389858 FTSJ3Q8IY81 847 aaKnown RBP27.05■■□□□ 1.92
LGR4-202ENST00000389858 EIF4G1Q04637 1599 aaKnown RBP27.05■■□□□ 1.92
LGR4-202ENST00000389858 SUPT16HQ9Y5B9 1047 aaKnown RBP27.05■■□□□ 1.92
LGR4-202ENST00000389858 SOGA1O94964 1423 aa27.04■■□□□ 1.92
LGR4-202ENST00000389858 LAS1LQ9Y4W2 734 aaKnown RBP26.99■■□□□ 1.91
LGR4-202ENST00000389858 DCAF11Q8TEB1 546 aa26.99■■□□□ 1.91
LGR4-202ENST00000389858 KANK1Q14678 1352 aa26.97■■□□□ 1.91
LGR4-202ENST00000389858 TNNT2P45379 298 aaPredicted RBP26.97■■□□□ 1.91
LGR4-202ENST00000389858 CC2D1BQ5T0F9 858 aaKnown RBP26.96■■□□□ 1.91
LGR4-202ENST00000389858 LMOD2Q6P5Q4 547 aa26.96■■□□□ 1.91
LGR4-202ENST00000389858 NCLP19338 710 aaKnown RBP26.95■■□□□ 1.9
LGR4-202ENST00000389858 TMF1P82094 1093 aa26.95■■□□□ 1.9
LGR4-202ENST00000389858 TIMELESSQ9UNS1 1208 aa26.94■■□□□ 1.9
LGR4-202ENST00000389858 GOLGA6L22H0YM25 854 aa26.92■■□□□ 1.9
LGR4-202ENST00000389858 CASC1Q6TDU7 716 aa26.91■■□□□ 1.9
LGR4-202ENST00000389858 U2SURPO15042 1029 aaKnown RBP26.89■■□□□ 1.9
LGR4-202ENST00000389858 FRAT1Q92837 279 aaPredicted RBP26.88■■□□□ 1.89
LGR4-202ENST00000389858 ANP32EQ9BTT0 268 aa26.88■■□□□ 1.89
LGR4-202ENST00000389858 VPS8Q8N3P4 1428 aa26.86■■□□□ 1.89
LGR4-202ENST00000389858 PPP4R2Q9NY27 417 aa26.86■■□□□ 1.89
LGR4-202ENST00000389858 ARHGAP35Q9NRY4 1499 aa26.84■■□□□ 1.89
LGR4-202ENST00000389858 SETD5Q9C0A6 1442 aa26.84■■□□□ 1.89
LGR4-202ENST00000389858 PNNQ9H307 717 aaKnown RBP26.84■■□□□ 1.89
LGR4-202ENST00000389858 CCDC88BA6NC98 1476 aa26.84■■□□□ 1.89
LGR4-202ENST00000389858 HDGFP51858 240 aaKnown RBP26.84■■□□□ 1.89
LGR4-202ENST00000389858 CHMP4BQ9H444 224 aaKnown RBP26.83■■□□□ 1.89
LGR4-202ENST00000389858 MS4A1P11836 297 aa26.81■■□□□ 1.88
LGR4-202ENST00000389858 MLECQ14165 292 aa26.81■■□□□ 1.88
LGR4-202ENST00000389858 CDK11BP21127 795 aaKnown RBP26.8■■□□□ 1.88
LGR4-202ENST00000389858 MROH2BQ7Z745 1585 aa26.8■■□□□ 1.88
LGR4-202ENST00000389858 CARMIL2Q6F5E8 1435 aa26.8■■□□□ 1.88
LGR4-202ENST00000389858 RGS3P49796 1198 aa26.8■■□□□ 1.88
LGR4-202ENST00000389858 SRPK2P78362 688 aaKnown RBP26.78■■□□□ 1.88
LGR4-202ENST00000389858 PKD2Q13563 968 aa26.77■■□□□ 1.88
LGR4-202ENST00000389858 PDS5BQ9NTI5 1447 aa26.77■■□□□ 1.88
LGR4-202ENST00000389858 KANK4Q5T7N3 995 aaPredicted RBP26.75■■□□□ 1.87
LGR4-202ENST00000389858 GGT6Q6P531 493 aa26.75■■□□□ 1.87
LGR4-202ENST00000389858 TRIM44Q96DX7 344 aaPredicted RBP26.74■■□□□ 1.87
LGR4-202ENST00000389858 SMARCA2P51531 1590 aa26.74■■□□□ 1.87
LGR4-202ENST00000389858 MORC1Q86VD1 984 aa26.73■■□□□ 1.87
LGR4-202ENST00000389858 ABCC8Q09428 1581 aa26.72■■□□□ 1.87
LGR4-202ENST00000389858 GLIPR1L2Q4G1C9 344 aa26.72■■□□□ 1.87
LGR4-202ENST00000389858 HSPA5P11021 654 aaKnown RBP26.72■■□□□ 1.87
LGR4-202ENST00000389858 TRHP20396 242 aaPredicted RBP26.72■■□□□ 1.87
LGR4-202ENST00000389858 TDRD9Q8NDG6 1382 aaKnown RBP26.71■■□□□ 1.87
LGR4-202ENST00000389858 SAFB2Q14151 953 aaKnown RBP eCLIP26.7■■□□□ 1.87
LGR4-202ENST00000389858 ZRSR1Q15695 479 aaKnown RBP26.69■■□□□ 1.86
LGR4-202ENST00000389858 FMN1Q68DA7 1419 aa26.68■■□□□ 1.86
LGR4-202ENST00000389858 CCER2I3L3R5 266 aa26.68■■□□□ 1.86
LGR4-202ENST00000389858 OS9Q13438 667 aaPredicted RBP26.68■■□□□ 1.86
LGR4-202ENST00000389858 SOX12O15370 315 aa26.66■■□□□ 1.86
LGR4-202ENST00000389858 FOXD1Q16676 465 aa26.66■■□□□ 1.86
LGR4-202ENST00000389858 EFCAB2Q5VUJ9 269 aa26.65■■□□□ 1.86
LGR4-202ENST00000389858 B4GALNT3Q6L9W6 998 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms