RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 ABCC9O60706 1549 aa20.66■□□□□ 0.9
ALK-201ENST00000389048 AMER1Q5JTC6 1135 aaPredicted RBP20.65■□□□□ 0.9
ALK-201ENST00000389048 C14orf37Q86TY3 774 aa20.64■□□□□ 0.9
ALK-201ENST00000389048 MYH16Q9H6N6 1097 aa20.63■□□□□ 0.89
ALK-201ENST00000389048 DNTTIP2Q5QJE6 756 aaKnown RBP20.6■□□□□ 0.89
ALK-201ENST00000389048 PTMAP06454 111 aaKnown RBP20.59■□□□□ 0.89
ALK-201ENST00000389048 LAS1LQ9Y4W2 734 aaKnown RBP20.59■□□□□ 0.89
ALK-201ENST00000389048 CSRNP3Q8WYN3 585 aa20.57■□□□□ 0.88
ALK-201ENST00000389048 NAP1L5Q96NT1 182 aaPredicted RBP20.55■□□□□ 0.88
ALK-201ENST00000389048 PLCB2Q00722 1185 aa20.53■□□□□ 0.88
ALK-201ENST00000389048 BECN1Q14457 450 aa20.49■□□□□ 0.87
ALK-201ENST00000389048 ANP32EQ9BTT0 268 aa20.48■□□□□ 0.87
ALK-201ENST00000389048 NCBP3Q53F19 620 aaKnown RBP20.46■□□□□ 0.87
ALK-201ENST00000389048 PPM1GO15355 546 aaPredicted RBP20.46■□□□□ 0.87
ALK-201ENST00000389048 DDRGK1Q96HY6 314 aa20.45■□□□□ 0.86
ALK-201ENST00000389048 ARID4BQ4LE39 1312 aaPredicted RBP20.45■□□□□ 0.86
ALK-201ENST00000389048 TNNT2P45379 298 aaPredicted RBP20.44■□□□□ 0.86
ALK-201ENST00000389048 NEUROD2Q15784 382 aa20.42■□□□□ 0.86
ALK-201ENST00000389048 ZRSR1Q15695 479 aaKnown RBP20.42■□□□□ 0.86
ALK-201ENST00000389048 GOLGA6L22H0YM25 854 aa20.42■□□□□ 0.86
ALK-201ENST00000389048 SUPT16HQ9Y5B9 1047 aaKnown RBP20.41■□□□□ 0.86
ALK-201ENST00000389048 RRP7BPQ9NSQ0 103 aa20.38■□□□□ 0.85
ALK-201ENST00000389048 RGS3P49796 1198 aa20.37■□□□□ 0.85
ALK-201ENST00000389048 RGL3Q3MIN7 710 aa20.37■□□□□ 0.85
ALK-201ENST00000389048 SPRYD3Q8NCJ5 442 aa20.36■□□□□ 0.85
ALK-201ENST00000389048 NPM1P06748 294 aaKnown RBP eCLIP20.33■□□□□ 0.85
ALK-201ENST00000389048 ARID3AQ99856 593 aa20.33■□□□□ 0.84
ALK-201ENST00000389048 NAP1L2Q9ULW6 460 aaPredicted RBP20.32■□□□□ 0.84
ALK-201ENST00000389048 FTSJ3Q8IY81 847 aaKnown RBP20.31■□□□□ 0.84
ALK-201ENST00000389048 FRAT1Q92837 279 aaPredicted RBP20.29■□□□□ 0.84
ALK-201ENST00000389048 PPP1R15AO75807 674 aaPredicted RBP20.28■□□□□ 0.84
ALK-201ENST00000389048 HAP1P54257 671 aaPredicted RBP20.28■□□□□ 0.84
ALK-201ENST00000389048 CASC1Q6TDU7 716 aa20.27■□□□□ 0.84
ALK-201ENST00000389048 EIF4G2P78344 907 aaKnown RBP eCLIP20.25■□□□□ 0.83
ALK-201ENST00000389048 HSP90AB1P08238 724 aaKnown RBP20.23■□□□□ 0.83
ALK-201ENST00000389048 KCNH8Q96L42 1107 aa20.22■□□□□ 0.83
ALK-201ENST00000389048 TSPY4P0CV99 314 aa20.22■□□□□ 0.83
ALK-201ENST00000389048 TSPY10P0CW01 314 aa20.22■□□□□ 0.83
ALK-201ENST00000389048 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.21■□□□□ 0.83
ALK-201ENST00000389048 CLSTN1O94985 981 aa20.2■□□□□ 0.82
ALK-201ENST00000389048 LMOD2Q6P5Q4 547 aa20.2■□□□□ 0.82
ALK-201ENST00000389048 B4GALNT3Q6L9W6 998 aa20.19■□□□□ 0.82
ALK-201ENST00000389048 NOP58Q9Y2X3 529 aaKnown RBP20.18■□□□□ 0.82
ALK-201ENST00000389048 CC2D1BQ5T0F9 858 aaKnown RBP20.18■□□□□ 0.82
ALK-201ENST00000389048 ERICH6BQ5W0A0 696 aa20.17■□□□□ 0.82
ALK-201ENST00000389048 NPHP1O15259 732 aa20.17■□□□□ 0.82
ALK-201ENST00000389048 OS9Q13438 667 aaPredicted RBP20.16■□□□□ 0.82
ALK-201ENST00000389048 FGD1P98174 961 aa20.15■□□□□ 0.82
ALK-201ENST00000389048 MTUS2Q5JR59 1369 aa20.14■□□□□ 0.81
ALK-201ENST00000389048 KNSTRNQ9Y448 316 aa20.11■□□□□ 0.81
ALK-201ENST00000389048 KCNJ4P48050 445 aa20.11■□□□□ 0.81
ALK-201ENST00000389048 DEKP35659 375 aaKnown RBP20.1■□□□□ 0.81
ALK-201ENST00000389048 CFAP53Q96M91 514 aa20.1■□□□□ 0.81
ALK-201ENST00000389048 SOX12O15370 315 aa20.09■□□□□ 0.81
ALK-201ENST00000389048 DRC7Q8IY82 874 aa20.09■□□□□ 0.81
ALK-201ENST00000389048 MAPK8IP3Q9UPT6 1336 aa20.06■□□□□ 0.8
ALK-201ENST00000389048 U2SURPO15042 1029 aaKnown RBP20.06■□□□□ 0.8
ALK-201ENST00000389048 GOLGA6L6A8MZA4 724 aa20.05■□□□□ 0.8
ALK-201ENST00000389048 APBB1O00213 710 aa20.04■□□□□ 0.8
ALK-201ENST00000389048 CARD11Q9BXL7 1154 aa20.04■□□□□ 0.8
ALK-201ENST00000389048 ISY1Q9ULR0 285 aaKnown RBP20.03■□□□□ 0.8
ALK-201ENST00000389048 GZF1Q9H116 711 aaPredicted RBP20.01■□□□□ 0.79
ALK-201ENST00000389048 DCAF1Q9Y4B6 1507 aa20.01■□□□□ 0.79
ALK-201ENST00000389048 MSNP26038 577 aaKnown RBP20.01■□□□□ 0.79
ALK-201ENST00000389048 GOLGA6L4A6NEF3 574 aa20■□□□□ 0.79
ALK-201ENST00000389048 PPP4R2Q9NY27 417 aa20■□□□□ 0.79
ALK-201ENST00000389048 PDE4CQ08493 712 aa19.99■□□□□ 0.79
ALK-201ENST00000389048 SIN3AQ96ST3 1273 aa19.99■□□□□ 0.79
ALK-201ENST00000389048 GOLGA2Q08379 1002 aa19.98■□□□□ 0.79
ALK-201ENST00000389048 SCRIBQ14160 1630 aa19.97■□□□□ 0.79
ALK-201ENST00000389048 HSCBQ8IWL3 235 aa19.97■□□□□ 0.79
ALK-201ENST00000389048 CHMP7Q8WUX9 453 aaPredicted RBP19.97■□□□□ 0.79
ALK-201ENST00000389048 CHAF1AQ13111 956 aaPredicted RBP19.96■□□□□ 0.79
ALK-201ENST00000389048 ANO8Q9HCE9 1232 aaPredicted RBP19.96■□□□□ 0.79
ALK-201ENST00000389048 POGKQ9P215 609 aa19.92■□□□□ 0.78
ALK-201ENST00000389048 SAFB2Q14151 953 aaKnown RBP eCLIP19.9■□□□□ 0.78
ALK-201ENST00000389048 NUDCQ9Y266 331 aa19.87■□□□□ 0.77
ALK-201ENST00000389048 NRDCO43847 1150 aa19.86■□□□□ 0.77
ALK-201ENST00000389048 GNL2Q13823 731 aaKnown RBP19.86■□□□□ 0.77
ALK-201ENST00000389048 SLKQ9H2G2 1235 aaPredicted RBP19.86■□□□□ 0.77
ALK-201ENST00000389048 CLIP1P30622 1438 aa19.85■□□□□ 0.77
ALK-201ENST00000389048 ZCCHC6Q5VYS8 1495 aaKnown RBP19.84■□□□□ 0.77
ALK-201ENST00000389048 FOXD4L1Q9NU39 408 aa19.83■□□□□ 0.77
ALK-201ENST00000389048 NOC3LQ8WTT2 800 aaKnown RBP19.81■□□□□ 0.76
ALK-201ENST00000389048 RBM19Q9Y4C8 960 aaKnown RBP19.81■□□□□ 0.76
ALK-201ENST00000389048 PNNQ9H307 717 aaKnown RBP19.81■□□□□ 0.76
ALK-201ENST00000389048 ZNF330Q9Y3S2 320 aaPredicted RBP19.8■□□□□ 0.76
ALK-201ENST00000389048 L1TD1Q5T7N2 865 aaKnown RBP19.8■□□□□ 0.76
ALK-201ENST00000389048 PRM3Q9NNZ6 103 aa19.8■□□□□ 0.76
ALK-201ENST00000389048 CDCA8Q53HL2 280 aa19.79■□□□□ 0.76
ALK-201ENST00000389048 NOL8Q76FK4 1167 aaKnown RBP19.79■□□□□ 0.76
ALK-201ENST00000389048 MYO15BQ96JP2 1530 aa19.78■□□□□ 0.76
ALK-201ENST00000389048 HSP90B1P14625 803 aaKnown RBP19.77■□□□□ 0.75
ALK-201ENST00000389048 MCCP23508 829 aa19.76■□□□□ 0.75
ALK-201ENST00000389048 CREBRFQ8IUR6 639 aa19.76■□□□□ 0.75
ALK-201ENST00000389048 PLEKHD1A6NEE1 506 aa19.76■□□□□ 0.75
ALK-201ENST00000389048 CFDP1Q9UEE9 299 aaPredicted RBP19.75■□□□□ 0.75
ALK-201ENST00000389048 MLECQ14165 292 aa19.74■□□□□ 0.75
ALK-201ENST00000389048 FOXD4L5Q5VV16 416 aaPredicted RBP19.73■□□□□ 0.75
ALK-201ENST00000389048 FOXD4L4Q8WXT5 416 aaPredicted RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms