RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 RGL3Q3MIN7 710 aa19.89■□□□□ 0.77
LRRK1-201ENST00000388948 GTF3C3Q9Y5Q9 886 aa19.89■□□□□ 0.77
LRRK1-201ENST00000388948 ANP32BQ92688 251 aaKnown RBP19.88■□□□□ 0.77
LRRK1-201ENST00000388948 MYH16Q9H6N6 1097 aa19.88■□□□□ 0.77
LRRK1-201ENST00000388948 PPM1GO15355 546 aaPredicted RBP19.85■□□□□ 0.77
LRRK1-201ENST00000388948 MLECQ14165 292 aa19.81■□□□□ 0.76
LRRK1-201ENST00000388948 CFDP1Q9UEE9 299 aaPredicted RBP19.8■□□□□ 0.76
LRRK1-201ENST00000388948 CDK11BP21127 795 aaKnown RBP19.79■□□□□ 0.76
LRRK1-201ENST00000388948 POGKQ9P215 609 aa19.76■□□□□ 0.75
LRRK1-201ENST00000388948 RSF1Q96T23 1441 aaPredicted RBP19.75■□□□□ 0.75
LRRK1-201ENST00000388948 MRS2Q9HD23 443 aa19.74■□□□□ 0.75
LRRK1-201ENST00000388948 BAZ1BQ9UIG0 1483 aaKnown RBP19.71■□□□□ 0.75
LRRK1-201ENST00000388948 CFAP53Q96M91 514 aa19.7■□□□□ 0.74
LRRK1-201ENST00000388948 FKBP8Q14318 412 aa19.7■□□□□ 0.74
LRRK1-201ENST00000388948 ZCCHC6Q5VYS8 1495 aaKnown RBP19.69■□□□□ 0.74
LRRK1-201ENST00000388948 CCDC180Q9P1Z9 1646 aa19.68■□□□□ 0.74
LRRK1-201ENST00000388948 HIRIP3Q9BW71 556 aaPredicted RBP19.68■□□□□ 0.74
LRRK1-201ENST00000388948 CCDC136Q96JN2 1154 aa19.67■□□□□ 0.74
LRRK1-201ENST00000388948 CLIP1P30622 1438 aa19.67■□□□□ 0.74
LRRK1-201ENST00000388948 EIF4G2P78344 907 aaKnown RBP eCLIP19.66■□□□□ 0.74
LRRK1-201ENST00000388948 TULP1O00294 542 aaPredicted RBP19.65■□□□□ 0.74
LRRK1-201ENST00000388948 CDCA8Q53HL2 280 aa19.64■□□□□ 0.73
LRRK1-201ENST00000388948 KNSTRNQ9Y448 316 aa19.62■□□□□ 0.73
LRRK1-201ENST00000388948 LAS1LQ9Y4W2 734 aaKnown RBP19.62■□□□□ 0.73
LRRK1-201ENST00000388948 HDGFP51858 240 aaKnown RBP19.61■□□□□ 0.73
LRRK1-201ENST00000388948 SOX12O15370 315 aa19.56■□□□□ 0.72
LRRK1-201ENST00000388948 MAPK8IP3Q9UPT6 1336 aa19.55■□□□□ 0.72
LRRK1-201ENST00000388948 KIF27Q86VH2 1401 aa19.55■□□□□ 0.72
LRRK1-201ENST00000388948 TNNT2P45379 298 aaPredicted RBP19.53■□□□□ 0.72
LRRK1-201ENST00000388948 CARD11Q9BXL7 1154 aa19.53■□□□□ 0.72
LRRK1-201ENST00000388948 NEUROD2Q15784 382 aa19.53■□□□□ 0.72
LRRK1-201ENST00000388948 GOLGA2Q08379 1002 aa19.52■□□□□ 0.72
LRRK1-201ENST00000388948 ACIN1Q9UKV3 1341 aaKnown RBP19.52■□□□□ 0.71
LRRK1-201ENST00000388948 NUDCQ9Y266 331 aa19.51■□□□□ 0.71
LRRK1-201ENST00000388948 EIF4G1Q04637 1599 aaKnown RBP19.51■□□□□ 0.71
LRRK1-201ENST00000388948 KANK1Q14678 1352 aa19.51■□□□□ 0.71
LRRK1-201ENST00000388948 NACADO15069 1562 aa19.49■□□□□ 0.71
LRRK1-201ENST00000388948 GGT6Q6P531 493 aa19.48■□□□□ 0.71
LRRK1-201ENST00000388948 FTSJ3Q8IY81 847 aaKnown RBP19.48■□□□□ 0.71
LRRK1-201ENST00000388948 WRNQ14191 1432 aaPredicted RBP eCLIP19.47■□□□□ 0.71
LRRK1-201ENST00000388948 TAOK2Q9UL54 1235 aa19.47■□□□□ 0.71
LRRK1-201ENST00000388948 SENP3-EIF4A1A0A087X0R7 540 aa19.46■□□□□ 0.71
LRRK1-201ENST00000388948 U2SURPO15042 1029 aaKnown RBP19.44■□□□□ 0.7
LRRK1-201ENST00000388948 GOLGA3Q08378 1498 aa19.44■□□□□ 0.7
LRRK1-201ENST00000388948 SRPK2P78362 688 aaKnown RBP19.43■□□□□ 0.7
LRRK1-201ENST00000388948 SAFB2Q14151 953 aaKnown RBP eCLIP19.43■□□□□ 0.7
LRRK1-201ENST00000388948 OS9Q13438 667 aaPredicted RBP19.43■□□□□ 0.7
LRRK1-201ENST00000388948 CCNB3Q8WWL7 1395 aa19.43■□□□□ 0.7
LRRK1-201ENST00000388948 CCDC9Q9Y3X0 531 aaKnown RBP19.42■□□□□ 0.7
LRRK1-201ENST00000388948 NCLP19338 710 aaKnown RBP19.42■□□□□ 0.7
LRRK1-201ENST00000388948 CASC1Q6TDU7 716 aa19.42■□□□□ 0.7
LRRK1-201ENST00000388948 IRX6P78412 446 aaPredicted RBP19.42■□□□□ 0.7
LRRK1-201ENST00000388948 PAK3O75914 559 aaPredicted RBP19.41■□□□□ 0.7
LRRK1-201ENST00000388948 ZRSR1Q15695 479 aaKnown RBP19.39■□□□□ 0.7
LRRK1-201ENST00000388948 STK26Q9P289 416 aa19.37■□□□□ 0.69
LRRK1-201ENST00000388948 CSB-PGBD3P0DP91 1061 aa19.36■□□□□ 0.69
LRRK1-201ENST00000388948 EEA1Q15075 1411 aa19.35■□□□□ 0.69
LRRK1-201ENST00000388948 TPRNQ4KMQ1 711 aa19.35■□□□□ 0.69
LRRK1-201ENST00000388948 PNNQ9H307 717 aaKnown RBP19.34■□□□□ 0.69
LRRK1-201ENST00000388948 AEBP2Q6ZN18 517 aaPredicted RBP19.33■□□□□ 0.69
LRRK1-201ENST00000388948 FGD1P98174 961 aa19.32■□□□□ 0.68
LRRK1-201ENST00000388948 ISY1Q9ULR0 285 aaKnown RBP19.32■□□□□ 0.68
LRRK1-201ENST00000388948 CC2D1BQ5T0F9 858 aaKnown RBP19.32■□□□□ 0.68
LRRK1-201ENST00000388948 DCAF11Q8TEB1 546 aa19.31■□□□□ 0.68
LRRK1-201ENST00000388948 ZNF330Q9Y3S2 320 aaPredicted RBP19.3■□□□□ 0.68
LRRK1-201ENST00000388948 CEP162Q5TB80 1403 aa19.3■□□□□ 0.68
LRRK1-201ENST00000388948 NAP1L2Q9ULW6 460 aaPredicted RBP19.3■□□□□ 0.68
LRRK1-201ENST00000388948 BECN1Q14457 450 aa19.29■□□□□ 0.68
LRRK1-201ENST00000388948 FRAT1Q92837 279 aaPredicted RBP19.29■□□□□ 0.68
LRRK1-201ENST00000388948 TMX4Q9H1E5 349 aaPredicted RBP19.28■□□□□ 0.68
LRRK1-201ENST00000388948 KCNJ4P48050 445 aa19.28■□□□□ 0.68
LRRK1-201ENST00000388948 NBR1Q14596 966 aa19.27■□□□□ 0.68
LRRK1-201ENST00000388948 EIF5BO60841 1220 aaKnown RBP19.27■□□□□ 0.68
LRRK1-201ENST00000388948 RTF1Q92541 710 aaKnown RBP19.27■□□□□ 0.68
LRRK1-201ENST00000388948 CARMIL2Q6F5E8 1435 aa19.26■□□□□ 0.67
LRRK1-201ENST00000388948 TMF1P82094 1093 aa19.26■□□□□ 0.67
LRRK1-201ENST00000388948 CUX2O14529 1486 aa19.25■□□□□ 0.67
LRRK1-201ENST00000388948 GOLGA6L22H0YM25 854 aa19.25■□□□□ 0.67
LRRK1-201ENST00000388948 DCAF1Q9Y4B6 1507 aa19.24■□□□□ 0.67
LRRK1-201ENST00000388948 NCBP3Q53F19 620 aaKnown RBP19.24■□□□□ 0.67
LRRK1-201ENST00000388948 CEP164Q9UPV0 1460 aa19.24■□□□□ 0.67
LRRK1-201ENST00000388948 CARMIL1Q5VZK9 1371 aa19.23■□□□□ 0.67
LRRK1-201ENST00000388948 EID1Q9Y6B2 187 aa19.22■□□□□ 0.67
LRRK1-201ENST00000388948 PDS5BQ9NTI5 1447 aa19.21■□□□□ 0.67
LRRK1-201ENST00000388948 CLSTN1O94985 981 aa19.21■□□□□ 0.67
LRRK1-201ENST00000388948 CHMP4BQ9H444 224 aaKnown RBP19.21■□□□□ 0.67
LRRK1-201ENST00000388948 HDGFL2Q7Z4V5 671 aaPredicted RBP19.21■□□□□ 0.67
LRRK1-201ENST00000388948 FHAD1B1AJZ9 1412 aa19.2■□□□□ 0.66
LRRK1-201ENST00000388948 MORC1Q86VD1 984 aa19.2■□□□□ 0.66
LRRK1-201ENST00000388948 EFCAB2Q5VUJ9 269 aa19.17■□□□□ 0.66
LRRK1-201ENST00000388948 BAZ1AQ9NRL2 1556 aaPredicted RBP19.16■□□□□ 0.66
LRRK1-201ENST00000388948 SIN3AQ96ST3 1273 aa19.14■□□□□ 0.65
LRRK1-201ENST00000388948 MS4A1P11836 297 aa19.14■□□□□ 0.65
LRRK1-201ENST00000388948 MIER1Q8N108 512 aa19.14■□□□□ 0.65
LRRK1-201ENST00000388948 CECR2Q9BXF3 1484 aa19.13■□□□□ 0.65
LRRK1-201ENST00000388948 DDRGK1Q96HY6 314 aa19.12■□□□□ 0.65
LRRK1-201ENST00000388948 G3V3G9 751 aa19.11■□□□□ 0.65
LRRK1-201ENST00000388948 DCAF8Q5TAQ9 597 aa19.11■□□□□ 0.65
LRRK1-201ENST00000388948 KIF3BO15066 747 aa19.1■□□□□ 0.65
LRRK1-201ENST00000388948 CYB5RLQ6IPT4 315 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms