RNA–Protein interactions for RNA: ENST00000388090.1

SNORA40-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 126 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40-201ENST00000388090 C7P10643 843 aa7.96□□□□□ -1.14
SNORA40-201ENST00000388090 SLC39A7Q92504 469 aa7.95□□□□□ -1.14
SNORA40-201ENST00000388090 MS4A3Q96HJ5 214 aa7.95□□□□□ -1.14
SNORA40-201ENST00000388090 MAMSTRQ6ZN01 415 aa7.94□□□□□ -1.14
SNORA40-201ENST00000388090 NPM1P06748 294 aaKnown RBP eCLIP7.92□□□□□ -1.14
SNORA40-201ENST00000388090 FAM163AQ96GL9 167 aaPredicted RBP7.92□□□□□ -1.14
SNORA40-201ENST00000388090 POTEFA5A3E0 1075 aa7.87□□□□□ -1.15
SNORA40-201ENST00000388090 ATN1P54259 1190 aaPredicted RBP7.87□□□□□ -1.15
SNORA40-201ENST00000388090 SCUBE2Q9NQ36 999 aa7.86□□□□□ -1.15
SNORA40-201ENST00000388090 SPDYE4A6NLX3 237 aa7.84□□□□□ -1.15
SNORA40-201ENST00000388090 CCDC61Q9Y6R9 512 aa7.81□□□□□ -1.16
SNORA40-201ENST00000388090 CDAN1Q8IWY9 1227 aa7.79□□□□□ -1.16
SNORA40-201ENST00000388090 BMP2KQ9NSY1 1161 aaPredicted RBP7.79□□□□□ -1.16
SNORA40-201ENST00000388090 TRPC6Q9Y210 931 aa7.79□□□□□ -1.16
SNORA40-201ENST00000388090 KIF12Q96FN5 646 aa7.78□□□□□ -1.16
SNORA40-201ENST00000388090 TSPYL2Q9H2G4 693 aaPredicted RBP7.78□□□□□ -1.16
SNORA40-201ENST00000388090 COLQQ9Y215 455 aaPredicted RBP7.75□□□□□ -1.17
SNORA40-201ENST00000388090 CSRNP3Q8WYN3 585 aa7.74□□□□□ -1.17
SNORA40-201ENST00000388090 TIE1P35590 1138 aa7.73□□□□□ -1.17
SNORA40-201ENST00000388090 MAP3K13O43283 966 aa7.71□□□□□ -1.18
SNORA40-201ENST00000388090 TTLL13PA6NNM8 815 aa7.69□□□□□ -1.18
SNORA40-201ENST00000388090 ST18O60284 1047 aa7.68□□□□□ -1.18
SNORA40-201ENST00000388090 SEC24BO95487 1268 aa7.67□□□□□ -1.18
SNORA40-201ENST00000388090 MMRN1Q13201 1228 aa7.64□□□□□ -1.19
SNORA40-201ENST00000388090 IER5LQ5T953 404 aa7.64□□□□□ -1.19
SNORA40-201ENST00000388090 PROM2Q8N271 834 aa7.64□□□□□ -1.19
SNORA40-201ENST00000388090 RASEFQ8IZ41 740 aa7.63□□□□□ -1.19
SNORA40-201ENST00000388090 SLAIN1Q8ND83 568 aa7.63□□□□□ -1.19
SNORA40-201ENST00000388090 TRIM35Q9UPQ4 493 aa7.63□□□□□ -1.19
SNORA40-201ENST00000388090 SPNS2Q8IVW8 549 aa7.62□□□□□ -1.19
SNORA40-201ENST00000388090 SGIP1Q9BQI5 828 aa7.57□□□□□ -1.2
SNORA40-201ENST00000388090 PCDHB13Q9Y5F0 798 aa7.55□□□□□ -1.2
SNORA40-201ENST00000388090 TMEM121BQ9BXQ6 578 aaPredicted RBP7.54□□□□□ -1.2
SNORA40-201ENST00000388090 IRX5P78411 483 aaPredicted RBP7.52□□□□□ -1.21
SNORA40-201ENST00000388090 IFNL1Q8IU54 200 aa7.52□□□□□ -1.21
SNORA40-201ENST00000388090 PLCG2P16885 1265 aa7.51□□□□□ -1.21
SNORA40-201ENST00000388090 MIER1Q8N108 512 aa7.51□□□□□ -1.21
SNORA40-201ENST00000388090 MARVELD3Q96A59 401 aa7.5□□□□□ -1.21
SNORA40-201ENST00000388090 TMEM106CQ9BVX2 250 aa7.5□□□□□ -1.21
SNORA40-201ENST00000388090 PLEKHG5O94827 1062 aa7.49□□□□□ -1.21
SNORA40-201ENST00000388090 SNPHO15079 494 aa7.46□□□□□ -1.22
SNORA40-201ENST00000388090 NUBP1P53384 320 aa7.46□□□□□ -1.22
SNORA40-201ENST00000388090 OCEL1Q9H607 264 aa7.44□□□□□ -1.22
SNORA40-201ENST00000388090 KRTAP3-3Q9BYR6 98 aa7.43□□□□□ -1.22
SNORA40-201ENST00000388090 KRTAP3-2Q9BYR7 98 aa7.43□□□□□ -1.22
SNORA40-201ENST00000388090 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.43□□□□□ -1.22
SNORA40-201ENST00000388090 POTEB3A0JP26 581 aa7.41□□□□□ -1.22
SNORA40-201ENST00000388090 POTEBQ6S5H4 581 aa7.41□□□□□ -1.22
SNORA40-201ENST00000388090 EMP3P54852 163 aa7.39□□□□□ -1.23
SNORA40-201ENST00000388090 PLCD3Q8N3E9 789 aa7.39□□□□□ -1.23
SNORA40-201ENST00000388090 HS3ST6Q96QI5 342 aa7.37□□□□□ -1.23
SNORA40-201ENST00000388090 FAM212AQ96EL1 285 aa7.36□□□□□ -1.23
SNORA40-201ENST00000388090 PDCD7Q8N8D1 485 aaKnown RBP7.35□□□□□ -1.23
SNORA40-201ENST00000388090 EHMT2Q96KQ7 1210 aa7.35□□□□□ -1.23
SNORA40-201ENST00000388090 ZBTB47Q9UFB7 747 aaPredicted RBP7.35□□□□□ -1.23
SNORA40-201ENST00000388090 FAM205CA6NFA0 338 aa7.34□□□□□ -1.23
SNORA40-201ENST00000388090 PCDHB8Q9UN66 801 aa7.32□□□□□ -1.24
SNORA40-201ENST00000388090 C3orf67Q6ZVT6 689 aa7.3□□□□□ -1.24
SNORA40-201ENST00000388090 PYGBP11216 843 aa7.29□□□□□ -1.24
SNORA40-201ENST00000388090 L3MBTL3Q96JM7 780 aaPredicted RBP7.27□□□□□ -1.25
SNORA40-201ENST00000388090 DCAF8Q5TAQ9 597 aa7.24□□□□□ -1.25
SNORA40-201ENST00000388090 HOXB3P14651 431 aaPredicted RBP7.23□□□□□ -1.25
SNORA40-201ENST00000388090 MKRN3Q13064 507 aaKnown RBP7.21□□□□□ -1.26
SNORA40-201ENST00000388090 ILDR1Q86SU0 546 aaPredicted RBP7.21□□□□□ -1.26
SNORA40-201ENST00000388090 RNF166Q96A37 237 aaPredicted RBP7.21□□□□□ -1.26
SNORA40-201ENST00000388090 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.21□□□□□ -1.26
SNORA40-201ENST00000388090 HOXB1P14653 301 aaPredicted RBP7.19□□□□□ -1.26
SNORA40-201ENST00000388090 GOLGA2Q08379 1002 aa7.18□□□□□ -1.26
SNORA40-201ENST00000388090 DPY19L2Q6NUT2 758 aa7.17□□□□□ -1.26
SNORA40-201ENST00000388090 ZNF467Q7Z7K2 595 aaPredicted RBP7.17□□□□□ -1.26
SNORA40-201ENST00000388090 MYT1LQ9UL68 1186 aa7.15□□□□□ -1.26
SNORA40-201ENST00000388090 ERBB3P21860 1342 aa7.15□□□□□ -1.26
SNORA40-201ENST00000388090 PSEN1P49768 467 aa7.13□□□□□ -1.27
SNORA40-201ENST00000388090 CHRM1P11229 460 aaPredicted RBP7.12□□□□□ -1.27
SNORA40-201ENST00000388090 ZNF710Q8N1W2 664 aa7.12□□□□□ -1.27
SNORA40-201ENST00000388090 BOLA1Q9Y3E2 137 aa7.12□□□□□ -1.27
SNORA40-201ENST00000388090 VARS2Q5ST30 1063 aaKnown RBP7.11□□□□□ -1.27
SNORA40-201ENST00000388090 DOK7Q18PE1 504 aa7.1□□□□□ -1.27
SNORA40-201ENST00000388090 GSE1Q14687 1217 aa7.08□□□□□ -1.28
SNORA40-201ENST00000388090 ZNF687Q8N1G0 1237 aa7.07□□□□□ -1.28
SNORA40-201ENST00000388090 PDAP1Q13442 181 aaKnown RBP7.06□□□□□ -1.28
SNORA40-201ENST00000388090 G3V3G9 751 aa7.05□□□□□ -1.28
SNORA40-201ENST00000388090 CABP2Q9NPB3 220 aa7.05□□□□□ -1.28
SNORA40-201ENST00000388090 PTGER2P43116 358 aa7.04□□□□□ -1.28
SNORA40-201ENST00000388090 RIMBP2O15034 1052 aa7.03□□□□□ -1.28
SNORA40-201ENST00000388090 GPR153Q6NV75 609 aa7.02□□□□□ -1.29
SNORA40-201ENST00000388090 ZSWIM6Q9HCJ5 1215 aa7.02□□□□□ -1.29
SNORA40-201ENST00000388090 FKBP8Q14318 412 aa7.01□□□□□ -1.29
SNORA40-201ENST00000388090 TMEM92Q6UXU6 159 aa7.01□□□□□ -1.29
SNORA40-201ENST00000388090 ANKRD13DQ6ZTN6 518 aa6.98□□□□□ -1.29
SNORA40-201ENST00000388090 KLHL34Q8N239 644 aa6.97□□□□□ -1.29
SNORA40-201ENST00000388090 FBXO3Q9UK99 471 aa6.97□□□□□ -1.29
SNORA40-201ENST00000388090 MICALL2Q8IY33 904 aa6.95□□□□□ -1.3
SNORA40-201ENST00000388090 VASPP50552 380 aaPredicted RBP6.94□□□□□ -1.3
SNORA40-201ENST00000388090 LSM11P83369 360 aaKnown RBP eCLIP6.94□□□□□ -1.3
SNORA40-201ENST00000388090 ARSIQ5FYB1 569 aa6.93□□□□□ -1.3
SNORA40-201ENST00000388090 EFCAB3Q8N7B9 438 aa6.93□□□□□ -1.3
SNORA40-201ENST00000388090 PLA2G2EQ9NZK7 142 aa6.93□□□□□ -1.3
SNORA40-201ENST00000388090 ZNF316A6NFI3 1004 aaPredicted RBP6.91□□□□□ -1.3
SNORA40-201ENST00000388090 KHSRPQ92945 711 aaKnown RBP eCLIP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms