RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 FARP1Q9Y4F1 1045 aaPredicted RBP7.24□□□□□ -1.25
RNU6-541P-201ENST00000384709 IFNLR1Q8IU57 520 aaPredicted RBP7.22□□□□□ -1.25
RNU6-541P-201ENST00000384709 PLCD3Q8N3E9 789 aa7.22□□□□□ -1.25
RNU6-541P-201ENST00000384709 ZBTB47Q9UFB7 747 aaPredicted RBP7.22□□□□□ -1.25
RNU6-541P-201ENST00000384709 PLEKHG5O94827 1062 aa7.21□□□□□ -1.26
RNU6-541P-201ENST00000384709 NPM1P06748 294 aaKnown RBP eCLIP7.19□□□□□ -1.26
RNU6-541P-201ENST00000384709 POTEJP0CG39 1038 aa7.19□□□□□ -1.26
RNU6-541P-201ENST00000384709 SPNS2Q8IVW8 549 aa7.17□□□□□ -1.26
RNU6-541P-201ENST00000384709 NUBP1P53384 320 aa7.16□□□□□ -1.26
RNU6-541P-201ENST00000384709 GALR2O43603 387 aaPredicted RBP7.11□□□□□ -1.27
RNU6-541P-201ENST00000384709 SPOCK2Q92563 424 aa7.11□□□□□ -1.27
RNU6-541P-201ENST00000384709 MAMSTRQ6ZN01 415 aa7.1□□□□□ -1.27
RNU6-541P-201ENST00000384709 PELP1Q8IZL8 1130 aaKnown RBP7.1□□□□□ -1.27
RNU6-541P-201ENST00000384709 RASEFQ8IZ41 740 aa7.09□□□□□ -1.27
RNU6-541P-201ENST00000384709 KLHL34Q8N239 644 aa7.09□□□□□ -1.27
RNU6-541P-201ENST00000384709 ZNF579Q8NAF0 562 aaKnown RBP7.06□□□□□ -1.28
RNU6-541P-201ENST00000384709 CCDC61Q9Y6R9 512 aa7.06□□□□□ -1.28
RNU6-541P-201ENST00000384709 GSE1Q14687 1217 aa7.04□□□□□ -1.28
RNU6-541P-201ENST00000384709 FAM212AQ96EL1 285 aa7.04□□□□□ -1.28
RNU6-541P-201ENST00000384709 PAK3O75914 559 aaPredicted RBP7.03□□□□□ -1.28
RNU6-541P-201ENST00000384709 CHRM1P11229 460 aaPredicted RBP7.02□□□□□ -1.29
RNU6-541P-201ENST00000384709 ZRANB1Q9UGI0 708 aa7.02□□□□□ -1.29
RNU6-541P-201ENST00000384709 SCUBE2Q9NQ36 999 aa7.01□□□□□ -1.29
RNU6-541P-201ENST00000384709 TRIM41Q8WV44 630 aa7□□□□□ -1.29
RNU6-541P-201ENST00000384709 SGIP1Q9BQI5 828 aa7□□□□□ -1.29
RNU6-541P-201ENST00000384709 TSPYL2Q9H2G4 693 aaPredicted RBP7□□□□□ -1.29
RNU6-541P-201ENST00000384709 METRNQ9UJH8 293 aa7□□□□□ -1.29
RNU6-541P-201ENST00000384709 DCAF8Q5TAQ9 597 aa6.99□□□□□ -1.29
RNU6-541P-201ENST00000384709 KIF12Q96FN5 646 aa6.98□□□□□ -1.29
RNU6-541P-201ENST00000384709 PKD2Q13563 968 aa6.97□□□□□ -1.29
RNU6-541P-201ENST00000384709 PHF12Q96QT6 1004 aa6.95□□□□□ -1.3
RNU6-541P-201ENST00000384709 C7P10643 843 aa6.93□□□□□ -1.3
RNU6-541P-201ENST00000384709 CIZ1Q9ULV3 898 aaPredicted RBP6.93□□□□□ -1.3
RNU6-541P-201ENST00000384709 MAP3K13O43283 966 aa6.92□□□□□ -1.3
RNU6-541P-201ENST00000384709 AMER1Q5JTC6 1135 aaPredicted RBP6.92□□□□□ -1.3
RNU6-541P-201ENST00000384709 PYGBP11216 843 aa6.91□□□□□ -1.3
RNU6-541P-201ENST00000384709 SLC39A7Q92504 469 aa6.91□□□□□ -1.3
RNU6-541P-201ENST00000384709 ST18O60284 1047 aa6.9□□□□□ -1.3
RNU6-541P-201ENST00000384709 MS4A3Q96HJ5 214 aa6.9□□□□□ -1.3
RNU6-541P-201ENST00000384709 ZNF467Q7Z7K2 595 aaPredicted RBP6.88□□□□□ -1.31
RNU6-541P-201ENST00000384709 IFNL1Q8IU54 200 aa6.88□□□□□ -1.31
RNU6-541P-201ENST00000384709 PCDHB13Q9Y5F0 798 aa6.88□□□□□ -1.31
RNU6-541P-201ENST00000384709 RNF25Q96BH1 459 aaPredicted RBP6.87□□□□□ -1.31
RNU6-541P-201ENST00000384709 ECM2O94769 699 aaPredicted RBP6.86□□□□□ -1.31
RNU6-541P-201ENST00000384709 TIE1P35590 1138 aa6.86□□□□□ -1.31
RNU6-541P-201ENST00000384709 ASTLQ6HA08 431 aaPredicted RBP6.85□□□□□ -1.31
RNU6-541P-201ENST00000384709 RTN4Q9NQC3 1192 aaKnown RBP6.85□□□□□ -1.31
RNU6-541P-201ENST00000384709 TRPC6Q9Y210 931 aa6.84□□□□□ -1.31
RNU6-541P-201ENST00000384709 RIOK3O14730 519 aaKnown RBP6.83□□□□□ -1.32
RNU6-541P-201ENST00000384709 PCDHB8Q9UN66 801 aa6.83□□□□□ -1.32
RNU6-541P-201ENST00000384709 RGL2O15211 777 aa6.82□□□□□ -1.32
RNU6-541P-201ENST00000384709 ATMINO43313 823 aaPredicted RBP6.82□□□□□ -1.32
RNU6-541P-201ENST00000384709 VGFO15240 615 aaPredicted RBP6.81□□□□□ -1.32
RNU6-541P-201ENST00000384709 PDAP1Q13442 181 aaKnown RBP6.81□□□□□ -1.32
RNU6-541P-201ENST00000384709 BMP2KQ9NSY1 1161 aaPredicted RBP6.81□□□□□ -1.32
RNU6-541P-201ENST00000384709 TTLL13PA6NNM8 815 aa6.79□□□□□ -1.32
RNU6-541P-201ENST00000384709 TAOK2Q9UL54 1235 aa6.79□□□□□ -1.32
RNU6-541P-201ENST00000384709 PSEN1P49768 467 aa6.78□□□□□ -1.32
RNU6-541P-201ENST00000384709 DNAJC5Q9H3Z4 198 aa6.78□□□□□ -1.32
RNU6-541P-201ENST00000384709 POTEFA5A3E0 1075 aa6.77□□□□□ -1.33
RNU6-541P-201ENST00000384709 ATN1P54259 1190 aaPredicted RBP6.77□□□□□ -1.33
RNU6-541P-201ENST00000384709 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.75□□□□□ -1.33
RNU6-541P-201ENST00000384709 ZFP91Q96JP5 570 aaPredicted RBP6.75□□□□□ -1.33
RNU6-541P-201ENST00000384709 TMEM106CQ9BVX2 250 aa6.75□□□□□ -1.33
RNU6-541P-201ENST00000384709 IER5LQ5T953 404 aa6.74□□□□□ -1.33
RNU6-541P-201ENST00000384709 ILDR1Q86SU0 546 aaPredicted RBP6.74□□□□□ -1.33
RNU6-541P-201ENST00000384709 HS6ST3Q8IZP7 471 aa6.73□□□□□ -1.33
RNU6-541P-201ENST00000384709 TRIM35Q9UPQ4 493 aa6.72□□□□□ -1.33
RNU6-541P-201ENST00000384709 IRX5P78411 483 aaPredicted RBP6.69□□□□□ -1.34
RNU6-541P-201ENST00000384709 BCL11BQ9C0K0 894 aaPredicted RBP6.69□□□□□ -1.34
RNU6-541P-201ENST00000384709 STK25O00506 426 aa6.67□□□□□ -1.34
RNU6-541P-201ENST00000384709 SOX12O15370 315 aa6.67□□□□□ -1.34
RNU6-541P-201ENST00000384709 MARVELD3Q96A59 401 aa6.67□□□□□ -1.34
RNU6-541P-201ENST00000384709 KRTAP3-3Q9BYR6 98 aa6.67□□□□□ -1.34
RNU6-541P-201ENST00000384709 KRTAP3-2Q9BYR7 98 aa6.67□□□□□ -1.34
RNU6-541P-201ENST00000384709 CABP2Q9NPB3 220 aa6.67□□□□□ -1.34
RNU6-541P-201ENST00000384709 EFCAB3Q8N7B9 438 aa6.66□□□□□ -1.34
RNU6-541P-201ENST00000384709 SLAIN1Q8ND83 568 aa6.66□□□□□ -1.34
RNU6-541P-201ENST00000384709 TMEM121BQ9BXQ6 578 aaPredicted RBP6.66□□□□□ -1.34
RNU6-541P-201ENST00000384709 STK24Q9Y6E0 443 aa6.66□□□□□ -1.34
RNU6-541P-201ENST00000384709 PDCD7Q8N8D1 485 aaKnown RBP6.65□□□□□ -1.34
RNU6-541P-201ENST00000384709 FBXO22Q8NEZ5 403 aa6.64□□□□□ -1.35
RNU6-541P-201ENST00000384709 CHGAP10645 457 aaKnown RBP6.63□□□□□ -1.35
RNU6-541P-201ENST00000384709 MKRN3Q13064 507 aaKnown RBP6.63□□□□□ -1.35
RNU6-541P-201ENST00000384709 OCEL1Q9H607 264 aa6.63□□□□□ -1.35
RNU6-541P-201ENST00000384709 GOLGA2Q08379 1002 aa6.62□□□□□ -1.35
RNU6-541P-201ENST00000384709 NKX1-1Q15270 411 aaPredicted RBP6.62□□□□□ -1.35
RNU6-541P-201ENST00000384709 MFRPQ9BY79 579 aa6.62□□□□□ -1.35
RNU6-541P-201ENST00000384709 COLQQ9Y215 455 aaPredicted RBP6.62□□□□□ -1.35
RNU6-541P-201ENST00000384709 NLRP6P59044 892 aa6.6□□□□□ -1.35
RNU6-541P-201ENST00000384709 BBXQ8WY36 941 aaPredicted RBP6.6□□□□□ -1.35
RNU6-541P-201ENST00000384709 MS4A4AQ96JQ5 239 aa6.6□□□□□ -1.35
RNU6-541P-201ENST00000384709 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.59□□□□□ -1.35
RNU6-541P-201ENST00000384709 PHF8Q9UPP1 1060 aa6.59□□□□□ -1.35
RNU6-541P-201ENST00000384709 PLCG2P16885 1265 aa6.58□□□□□ -1.36
RNU6-541P-201ENST00000384709 SEC24BO95487 1268 aa6.57□□□□□ -1.36
RNU6-541P-201ENST00000384709 POTEB3A0JP26 581 aa6.56□□□□□ -1.36
RNU6-541P-201ENST00000384709 GTPBP6O43824 516 aaPredicted RBP6.56□□□□□ -1.36
RNU6-541P-201ENST00000384709 DCAF8L2P0C7V8 631 aa6.56□□□□□ -1.36
RNU6-541P-201ENST00000384709 POTEBQ6S5H4 581 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms