RNA–Protein interactions for RNA: ENST00000384526.1

RNU6-880P-201, Transcript of RNA, U6 small nuclear 880, pseudogene, humanhuman

BASIC

Gene RNU6-880P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-880P-201ENST00000384526 PAK3O75914 559 aaPredicted RBP6.99□□□□□ -1.29
RNU6-880P-201ENST00000384526 C7P10643 843 aa6.99□□□□□ -1.29
RNU6-880P-201ENST00000384526 MS4A3Q96HJ5 214 aa6.99□□□□□ -1.29
RNU6-880P-201ENST00000384526 SCUBE2Q9NQ36 999 aa6.95□□□□□ -1.3
RNU6-880P-201ENST00000384526 CDAN1Q8IWY9 1227 aa6.93□□□□□ -1.3
RNU6-880P-201ENST00000384526 POTEFA5A3E0 1075 aa6.92□□□□□ -1.3
RNU6-880P-201ENST00000384526 MNX1P50219 401 aaPredicted RBP6.92□□□□□ -1.3
RNU6-880P-201ENST00000384526 ATN1P54259 1190 aaPredicted RBP6.9□□□□□ -1.3
RNU6-880P-201ENST00000384526 STAG3Q9UJ98 1225 aa6.9□□□□□ -1.3
RNU6-880P-201ENST00000384526 NPM1P06748 294 aaKnown RBP eCLIP6.86□□□□□ -1.31
RNU6-880P-201ENST00000384526 BMP2KQ9NSY1 1161 aaPredicted RBP6.84□□□□□ -1.31
RNU6-880P-201ENST00000384526 MMRN1Q13201 1228 aa6.82□□□□□ -1.32
RNU6-880P-201ENST00000384526 TRPC6Q9Y210 931 aa6.82□□□□□ -1.32
RNU6-880P-201ENST00000384526 COLQQ9Y215 455 aaPredicted RBP6.8□□□□□ -1.32
RNU6-880P-201ENST00000384526 CCDC61Q9Y6R9 512 aa6.8□□□□□ -1.32
RNU6-880P-201ENST00000384526 ST18O60284 1047 aa6.78□□□□□ -1.32
RNU6-880P-201ENST00000384526 SPNS2Q8IVW8 549 aa6.78□□□□□ -1.32
RNU6-880P-201ENST00000384526 KIF12Q96FN5 646 aa6.77□□□□□ -1.33
RNU6-880P-201ENST00000384526 TSPYL2Q9H2G4 693 aaPredicted RBP6.77□□□□□ -1.33
RNU6-880P-201ENST00000384526 TIE1P35590 1138 aa6.75□□□□□ -1.33
RNU6-880P-201ENST00000384526 SPDYE4A6NLX3 237 aa6.72□□□□□ -1.33
RNU6-880P-201ENST00000384526 TTLL13PA6NNM8 815 aa6.72□□□□□ -1.33
RNU6-880P-201ENST00000384526 SLAIN1Q8ND83 568 aa6.72□□□□□ -1.33
RNU6-880P-201ENST00000384526 MAP3K13O43283 966 aa6.71□□□□□ -1.34
RNU6-880P-201ENST00000384526 SEC24BO95487 1268 aa6.71□□□□□ -1.34
RNU6-880P-201ENST00000384526 IER5LQ5T953 404 aa6.68□□□□□ -1.34
RNU6-880P-201ENST00000384526 TRIM35Q9UPQ4 493 aa6.67□□□□□ -1.34
RNU6-880P-201ENST00000384526 TMEM121BQ9BXQ6 578 aaPredicted RBP6.66□□□□□ -1.34
RNU6-880P-201ENST00000384526 MARVELD3Q96A59 401 aa6.63□□□□□ -1.35
RNU6-880P-201ENST00000384526 RASEFQ8IZ41 740 aa6.62□□□□□ -1.35
RNU6-880P-201ENST00000384526 KRTAP3-3Q9BYR6 98 aa6.59□□□□□ -1.35
RNU6-880P-201ENST00000384526 KRTAP3-2Q9BYR7 98 aa6.59□□□□□ -1.35
RNU6-880P-201ENST00000384526 PLCG2P16885 1265 aa6.57□□□□□ -1.36
RNU6-880P-201ENST00000384526 IRX5P78411 483 aaPredicted RBP6.57□□□□□ -1.36
RNU6-880P-201ENST00000384526 POTEB3A0JP26 581 aa6.55□□□□□ -1.36
RNU6-880P-201ENST00000384526 POTEBQ6S5H4 581 aa6.55□□□□□ -1.36
RNU6-880P-201ENST00000384526 SGIP1Q9BQI5 828 aa6.55□□□□□ -1.36
RNU6-880P-201ENST00000384526 PCDHB13Q9Y5F0 798 aa6.55□□□□□ -1.36
RNU6-880P-201ENST00000384526 SNPHO15079 494 aa6.54□□□□□ -1.36
RNU6-880P-201ENST00000384526 PROM2Q8N271 834 aa6.54□□□□□ -1.36
RNU6-880P-201ENST00000384526 IFNL1Q8IU54 200 aa6.53□□□□□ -1.36
RNU6-880P-201ENST00000384526 TMEM106CQ9BVX2 250 aa6.53□□□□□ -1.36
RNU6-880P-201ENST00000384526 EMP3P54852 163 aa6.52□□□□□ -1.37
RNU6-880P-201ENST00000384526 HS3ST6Q96QI5 342 aa6.51□□□□□ -1.37
RNU6-880P-201ENST00000384526 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.49□□□□□ -1.37
RNU6-880P-201ENST00000384526 CSRNP3Q8WYN3 585 aa6.48□□□□□ -1.37
RNU6-880P-201ENST00000384526 OCEL1Q9H607 264 aa6.48□□□□□ -1.37
RNU6-880P-201ENST00000384526 FAM205CA6NFA0 338 aa6.47□□□□□ -1.37
RNU6-880P-201ENST00000384526 NUBP1P53384 320 aa6.43□□□□□ -1.38
RNU6-880P-201ENST00000384526 PLEKHG5O94827 1062 aa6.42□□□□□ -1.38
RNU6-880P-201ENST00000384526 MIER1Q8N108 512 aa6.42□□□□□ -1.38
RNU6-880P-201ENST00000384526 PDCD7Q8N8D1 485 aaKnown RBP6.42□□□□□ -1.38
RNU6-880P-201ENST00000384526 RNF166Q96A37 237 aaPredicted RBP6.41□□□□□ -1.38
RNU6-880P-201ENST00000384526 C3orf67Q6ZVT6 689 aa6.4□□□□□ -1.38
RNU6-880P-201ENST00000384526 FAM212AQ96EL1 285 aa6.35□□□□□ -1.39
RNU6-880P-201ENST00000384526 HOXB3P14651 431 aaPredicted RBP6.33□□□□□ -1.4
RNU6-880P-201ENST00000384526 PLCD3Q8N3E9 789 aa6.32□□□□□ -1.4
RNU6-880P-201ENST00000384526 MYT1LQ9UL68 1186 aa6.32□□□□□ -1.4
RNU6-880P-201ENST00000384526 PCDHB8Q9UN66 801 aa6.32□□□□□ -1.4
RNU6-880P-201ENST00000384526 L3MBTL3Q96JM7 780 aaPredicted RBP6.31□□□□□ -1.4
RNU6-880P-201ENST00000384526 HOXB1P14653 301 aaPredicted RBP6.3□□□□□ -1.4
RNU6-880P-201ENST00000384526 PYGBP11216 843 aa6.29□□□□□ -1.4
RNU6-880P-201ENST00000384526 ZBTB47Q9UFB7 747 aaPredicted RBP6.29□□□□□ -1.4
RNU6-880P-201ENST00000384526 ERBB3P21860 1342 aa6.27□□□□□ -1.41
RNU6-880P-201ENST00000384526 ILDR1Q86SU0 546 aaPredicted RBP6.25□□□□□ -1.41
RNU6-880P-201ENST00000384526 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.25□□□□□ -1.41
RNU6-880P-201ENST00000384526 MKRN3Q13064 507 aaKnown RBP6.24□□□□□ -1.41
RNU6-880P-201ENST00000384526 VARS2Q5ST30 1063 aaKnown RBP6.24□□□□□ -1.41
RNU6-880P-201ENST00000384526 DPY19L2Q6NUT2 758 aa6.22□□□□□ -1.41
RNU6-880P-201ENST00000384526 ZNF710Q8N1W2 664 aa6.22□□□□□ -1.41
RNU6-880P-201ENST00000384526 PTGER2P43116 358 aa6.21□□□□□ -1.42
RNU6-880P-201ENST00000384526 GOLGA2Q08379 1002 aa6.21□□□□□ -1.42
RNU6-880P-201ENST00000384526 DOK7Q18PE1 504 aa6.21□□□□□ -1.42
RNU6-880P-201ENST00000384526 DCAF8Q5TAQ9 597 aa6.19□□□□□ -1.42
RNU6-880P-201ENST00000384526 ZNF687Q8N1G0 1237 aa6.19□□□□□ -1.42
RNU6-880P-201ENST00000384526 BOLA1Q9Y3E2 137 aa6.18□□□□□ -1.42
RNU6-880P-201ENST00000384526 ZNF467Q7Z7K2 595 aaPredicted RBP6.17□□□□□ -1.42
RNU6-880P-201ENST00000384526 PSEN1P49768 467 aa6.16□□□□□ -1.42
RNU6-880P-201ENST00000384526 RIMBP2O15034 1052 aa6.14□□□□□ -1.43
RNU6-880P-201ENST00000384526 PLA2G2EQ9NZK7 142 aa6.14□□□□□ -1.43
RNU6-880P-201ENST00000384526 G3V3G9 751 aa6.12□□□□□ -1.43
RNU6-880P-201ENST00000384526 EHMT2Q96KQ7 1210 aa6.12□□□□□ -1.43
RNU6-880P-201ENST00000384526 ZSWIM6Q9HCJ5 1215 aa6.12□□□□□ -1.43
RNU6-880P-201ENST00000384526 GPR153Q6NV75 609 aa6.11□□□□□ -1.43
RNU6-880P-201ENST00000384526 ANKRD13DQ6ZTN6 518 aa6.11□□□□□ -1.43
RNU6-880P-201ENST00000384526 LSM11P83369 360 aaKnown RBP eCLIP6.1□□□□□ -1.43
RNU6-880P-201ENST00000384526 TMEM92Q6UXU6 159 aa6.1□□□□□ -1.43
RNU6-880P-201ENST00000384526 CABP2Q9NPB3 220 aa6.09□□□□□ -1.43
RNU6-880P-201ENST00000384526 CHRM1P11229 460 aaPredicted RBP6.07□□□□□ -1.44
RNU6-880P-201ENST00000384526 PDAP1Q13442 181 aaKnown RBP6.07□□□□□ -1.44
RNU6-880P-201ENST00000384526 ZNF316A6NFI3 1004 aaPredicted RBP6.04□□□□□ -1.44
RNU6-880P-201ENST00000384526 GSE1Q14687 1217 aa6.04□□□□□ -1.44
RNU6-880P-201ENST00000384526 POTEEQ6S8J3 1075 aa6.03□□□□□ -1.44
RNU6-880P-201ENST00000384526 MICALL2Q8IY33 904 aa6.03□□□□□ -1.44
RNU6-880P-201ENST00000384526 HCSTQ9UBK5 93 aa6.03□□□□□ -1.44
RNU6-880P-201ENST00000384526 ARSIQ5FYB1 569 aa6.02□□□□□ -1.45
RNU6-880P-201ENST00000384526 KHSRPQ92945 711 aaKnown RBP eCLIP6.02□□□□□ -1.45
RNU6-880P-201ENST00000384526 PBX2P40425 430 aa5.99□□□□□ -1.45
RNU6-880P-201ENST00000384526 EFCAB3Q8N7B9 438 aa5.96□□□□□ -1.46
RNU6-880P-201ENST00000384526 AXIN2Q9Y2T1 843 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms