RNA–Protein interactions for RNA: ENST00000383999.1

RNU6-259P-201, Transcript of RNA, U6 small nuclear 259, pseudogene, humanhuman

BASIC

Gene RNU6-259P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-259P-201ENST00000383999 CLCN6P51797 869 aa11.77□□□□□ -0.53
RNU6-259P-201ENST00000383999 PHF12Q96QT6 1004 aa11.77□□□□□ -0.53
RNU6-259P-201ENST00000383999 KLHL34Q8N239 644 aa11.76□□□□□ -0.53
RNU6-259P-201ENST00000383999 CCDC61Q9Y6R9 512 aa11.72□□□□□ -0.53
RNU6-259P-201ENST00000383999 IFNLR1Q8IU57 520 aaPredicted RBP11.7□□□□□ -0.54
RNU6-259P-201ENST00000383999 GALR2O43603 387 aaPredicted RBP11.68□□□□□ -0.54
RNU6-259P-201ENST00000383999 FAM212AQ96EL1 285 aa11.66□□□□□ -0.54
RNU6-259P-201ENST00000383999 DCAF8Q5TAQ9 597 aa11.65□□□□□ -0.54
RNU6-259P-201ENST00000383999 KIF12Q96FN5 646 aa11.64□□□□□ -0.55
RNU6-259P-201ENST00000383999 DCBLD2Q96PD2 775 aa11.62□□□□□ -0.55
RNU6-259P-201ENST00000383999 SPOCK2Q92563 424 aa11.61□□□□□ -0.55
RNU6-259P-201ENST00000383999 MS4A3Q96HJ5 214 aa11.61□□□□□ -0.55
RNU6-259P-201ENST00000383999 POTEMA6NI47 508 aa11.6□□□□□ -0.55
RNU6-259P-201ENST00000383999 MAP3K13O43283 966 aa11.59□□□□□ -0.55
RNU6-259P-201ENST00000383999 OTUD5Q96G74 571 aa11.59□□□□□ -0.55
RNU6-259P-201ENST00000383999 GSE1Q14687 1217 aa11.55□□□□□ -0.56
RNU6-259P-201ENST00000383999 POTEGQ6S5H5 508 aa11.53□□□□□ -0.56
RNU6-259P-201ENST00000383999 SGIP1Q9BQI5 828 aa11.52□□□□□ -0.57
RNU6-259P-201ENST00000383999 PYGBP11216 843 aa11.51□□□□□ -0.57
RNU6-259P-201ENST00000383999 PCDHB13Q9Y5F0 798 aa11.51□□□□□ -0.57
RNU6-259P-201ENST00000383999 CIZ1Q9ULV3 898 aaPredicted RBP11.49□□□□□ -0.57
RNU6-259P-201ENST00000383999 POTEB2H3BUK9 544 aa11.48□□□□□ -0.57
RNU6-259P-201ENST00000383999 TRPC6Q9Y210 931 aa11.48□□□□□ -0.57
RNU6-259P-201ENST00000383999 IFNL1Q8IU54 200 aa11.46□□□□□ -0.57
RNU6-259P-201ENST00000383999 ATMINO43313 823 aaPredicted RBP11.45□□□□□ -0.58
RNU6-259P-201ENST00000383999 ASTLQ6HA08 431 aaPredicted RBP11.45□□□□□ -0.58
RNU6-259P-201ENST00000383999 CHRM1P11229 460 aaPredicted RBP11.44□□□□□ -0.58
RNU6-259P-201ENST00000383999 PELP1Q8IZL8 1130 aaKnown RBP11.44□□□□□ -0.58
RNU6-259P-201ENST00000383999 BMP2KQ9NSY1 1161 aaPredicted RBP11.43□□□□□ -0.58
RNU6-259P-201ENST00000383999 PCDH10Q9P2E7 1040 aa11.43□□□□□ -0.58
RNU6-259P-201ENST00000383999 TIE1P35590 1138 aa11.42□□□□□ -0.58
RNU6-259P-201ENST00000383999 ATN1P54259 1190 aaPredicted RBP11.4□□□□□ -0.58
RNU6-259P-201ENST00000383999 PCDHB8Q9UN66 801 aa11.4□□□□□ -0.58
RNU6-259P-201ENST00000383999 TTLL13PA6NNM8 815 aa11.37□□□□□ -0.59
RNU6-259P-201ENST00000383999 ZNF467Q7Z7K2 595 aaPredicted RBP11.35□□□□□ -0.59
RNU6-259P-201ENST00000383999 TRIM41Q8WV44 630 aa11.33□□□□□ -0.6
RNU6-259P-201ENST00000383999 SLC39A7Q92504 469 aa11.33□□□□□ -0.6
RNU6-259P-201ENST00000383999 TMEM106CQ9BVX2 250 aa11.33□□□□□ -0.6
RNU6-259P-201ENST00000383999 C7P10643 843 aa11.32□□□□□ -0.6
RNU6-259P-201ENST00000383999 METRNQ9UJH8 293 aa11.31□□□□□ -0.6
RNU6-259P-201ENST00000383999 TRIM35Q9UPQ4 493 aa11.29□□□□□ -0.6
RNU6-259P-201ENST00000383999 PSEN1P49768 467 aa11.26□□□□□ -0.61
RNU6-259P-201ENST00000383999 PDAP1Q13442 181 aaKnown RBP11.24□□□□□ -0.61
RNU6-259P-201ENST00000383999 IER5LQ5T953 404 aa11.22□□□□□ -0.61
RNU6-259P-201ENST00000383999 LCE2DQ5TA82 110 aaPredicted RBP11.22□□□□□ -0.61
RNU6-259P-201ENST00000383999 POTEFA5A3E0 1075 aa11.21□□□□□ -0.61
RNU6-259P-201ENST00000383999 PKD2Q13563 968 aa11.2□□□□□ -0.62
RNU6-259P-201ENST00000383999 POTEJP0CG39 1038 aa11.19□□□□□ -0.62
RNU6-259P-201ENST00000383999 RNF25Q96BH1 459 aaPredicted RBP11.19□□□□□ -0.62
RNU6-259P-201ENST00000383999 COLQQ9Y215 455 aaPredicted RBP11.19□□□□□ -0.62
RNU6-259P-201ENST00000383999 SEC24BO95487 1268 aa11.18□□□□□ -0.62
RNU6-259P-201ENST00000383999 RIOK3O14730 519 aaKnown RBP11.17□□□□□ -0.62
RNU6-259P-201ENST00000383999 ECM2O94769 699 aaPredicted RBP11.17□□□□□ -0.62
RNU6-259P-201ENST00000383999 FAM163AQ96GL9 167 aaPredicted RBP11.14□□□□□ -0.63
RNU6-259P-201ENST00000383999 IRX5P78411 483 aaPredicted RBP11.13□□□□□ -0.63
RNU6-259P-201ENST00000383999 GOLGA2Q08379 1002 aa11.13□□□□□ -0.63
RNU6-259P-201ENST00000383999 MKRN3Q13064 507 aaKnown RBP11.12□□□□□ -0.63
RNU6-259P-201ENST00000383999 VGFO15240 615 aaPredicted RBP11.11□□□□□ -0.63
RNU6-259P-201ENST00000383999 PLCG2P16885 1265 aa11.11□□□□□ -0.63
RNU6-259P-201ENST00000383999 MAMSTRQ6ZN01 415 aa11.11□□□□□ -0.63
RNU6-259P-201ENST00000383999 OCEL1Q9H607 264 aa11.11□□□□□ -0.63
RNU6-259P-201ENST00000383999 CABP2Q9NPB3 220 aa11.11□□□□□ -0.63
RNU6-259P-201ENST00000383999 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.09□□□□□ -0.63
RNU6-259P-201ENST00000383999 ZFP91Q96JP5 570 aaPredicted RBP11.09□□□□□ -0.63
RNU6-259P-201ENST00000383999 RGL2O15211 777 aa11.08□□□□□ -0.64
RNU6-259P-201ENST00000383999 TAOK2Q9UL54 1235 aa11.06□□□□□ -0.64
RNU6-259P-201ENST00000383999 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.05□□□□□ -0.64
RNU6-259P-201ENST00000383999 EFCAB3Q8N7B9 438 aa11.02□□□□□ -0.65
RNU6-259P-201ENST00000383999 PDCD7Q8N8D1 485 aaKnown RBP11.02□□□□□ -0.65
RNU6-259P-201ENST00000383999 ILDR1Q86SU0 546 aaPredicted RBP11.01□□□□□ -0.65
RNU6-259P-201ENST00000383999 SCUBE2Q9NQ36 999 aa11.01□□□□□ -0.65
RNU6-259P-201ENST00000383999 BCL11BQ9C0K0 894 aaPredicted RBP10.99□□□□□ -0.65
RNU6-259P-201ENST00000383999 CDAN1Q8IWY9 1227 aa10.97□□□□□ -0.65
RNU6-259P-201ENST00000383999 STK24Q9Y6E0 443 aa10.97□□□□□ -0.65
RNU6-259P-201ENST00000383999 STK25O00506 426 aa10.96□□□□□ -0.65
RNU6-259P-201ENST00000383999 DPY19L2Q6NUT2 758 aa10.96□□□□□ -0.65
RNU6-259P-201ENST00000383999 L3MBTL3Q96JM7 780 aaPredicted RBP10.95□□□□□ -0.66
RNU6-259P-201ENST00000383999 SOX12O15370 315 aa10.94□□□□□ -0.66
RNU6-259P-201ENST00000383999 PHF8Q9UPP1 1060 aa10.9□□□□□ -0.66
RNU6-259P-201ENST00000383999 SLAIN1Q8ND83 568 aa10.88□□□□□ -0.67
RNU6-259P-201ENST00000383999 MS4A4AQ96JQ5 239 aa10.87□□□□□ -0.67
RNU6-259P-201ENST00000383999 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.87□□□□□ -0.67
RNU6-259P-201ENST00000383999 NLRP6P59044 892 aa10.86□□□□□ -0.67
RNU6-259P-201ENST00000383999 BOLA1Q9Y3E2 137 aa10.86□□□□□ -0.67
RNU6-259P-201ENST00000383999 G3V3G9 751 aa10.84□□□□□ -0.67
RNU6-259P-201ENST00000383999 C3orf67Q6ZVT6 689 aa10.84□□□□□ -0.67
RNU6-259P-201ENST00000383999 CHGAP10645 457 aaKnown RBP10.83□□□□□ -0.68
RNU6-259P-201ENST00000383999 HS6ST3Q8IZP7 471 aa10.83□□□□□ -0.68
RNU6-259P-201ENST00000383999 FBXO22Q8NEZ5 403 aa10.83□□□□□ -0.68
RNU6-259P-201ENST00000383999 MFRPQ9BY79 579 aa10.83□□□□□ -0.68
RNU6-259P-201ENST00000383999 TMEM121BQ9BXQ6 578 aaPredicted RBP10.81□□□□□ -0.68
RNU6-259P-201ENST00000383999 MMRN1Q13201 1228 aa10.78□□□□□ -0.68
RNU6-259P-201ENST00000383999 MICALL2Q8IY33 904 aa10.77□□□□□ -0.69
RNU6-259P-201ENST00000383999 AMER1Q5JTC6 1135 aaPredicted RBP10.75□□□□□ -0.69
RNU6-259P-201ENST00000383999 DCAF8L2P0C7V8 631 aa10.74□□□□□ -0.69
RNU6-259P-201ENST00000383999 SPNS2Q8IVW8 549 aa10.73□□□□□ -0.69
RNU6-259P-201ENST00000383999 DNAJC5Q9H3Z4 198 aa10.73□□□□□ -0.69
RNU6-259P-201ENST00000383999 RTN4Q9NQC3 1192 aaKnown RBP10.73□□□□□ -0.69
RNU6-259P-201ENST00000383999 ST18O60284 1047 aa10.72□□□□□ -0.69
RNU6-259P-201ENST00000383999 SNPHO15079 494 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms