RNA–Protein interactions for RNA: ENST00000383829.6

BRPF1-201, Transcript of bromodomain and PHD finger containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene BRPF1, Length 4,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1-201ENST00000383829 FHAD1B1AJZ9 1412 aa23.33■■□□□ 1.32
BRPF1-201ENST00000383829 CARMIL1Q5VZK9 1371 aa23.29■■□□□ 1.32
BRPF1-201ENST00000383829 SMARCA2P51531 1590 aa23.27■■□□□ 1.32
BRPF1-201ENST00000383829 CUX2O14529 1486 aa23.26■■□□□ 1.31
BRPF1-201ENST00000383829 NEFMP07197 916 aa23.25■■□□□ 1.31
BRPF1-201ENST00000383829 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.23■■□□□ 1.312e-7■■□□□ 13.3
BRPF1-201ENST00000383829 ZBTB47Q9UFB7 747 aaPredicted RBP23.23■■□□□ 1.31
BRPF1-201ENST00000383829 KDM2AQ9Y2K7 1162 aa23.23■■□□□ 1.31
BRPF1-201ENST00000383829 SIN3AQ96ST3 1273 aa23.22■■□□□ 1.31
BRPF1-201ENST00000383829 CCDC136Q96JN2 1154 aa23.21■■□□□ 1.31
BRPF1-201ENST00000383829 TIMELESSQ9UNS1 1208 aa23.21■■□□□ 1.31
BRPF1-201ENST00000383829 PLEKHD1A6NEE1 506 aa23.18■■□□□ 1.3
BRPF1-201ENST00000383829 NPM2Q86SE8 214 aaKnown RBP23.18■■□□□ 1.3
BRPF1-201ENST00000383829 SALL2Q9Y467 1007 aaPredicted RBP23.16■■□□□ 1.3
BRPF1-201ENST00000383829 CHGAP10645 457 aaKnown RBP23.15■■□□□ 1.3
BRPF1-201ENST00000383829 KANK4Q5T7N3 995 aaPredicted RBP23.14■■□□□ 1.29
BRPF1-201ENST00000383829 CFDP1Q9UEE9 299 aaPredicted RBP23.14■■□□□ 1.29
BRPF1-201ENST00000383829 IRX6P78412 446 aaPredicted RBP23.1■■□□□ 1.29
BRPF1-201ENST00000383829 SETD5Q9C0A6 1442 aa23.1■■□□□ 1.29
BRPF1-201ENST00000383829 NPM1P06748 294 aaKnown RBP eCLIP23.1■■□□□ 1.29
BRPF1-201ENST00000383829 SMARCA4P51532 1647 aa23.07■■□□□ 1.28
BRPF1-201ENST00000383829 WDR43Q15061 677 aaKnown RBP eCLIP23.07■■□□□ 1.28
BRPF1-201ENST00000383829 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.06■■□□□ 1.28
BRPF1-201ENST00000383829 ARHGAP35Q9NRY4 1499 aa23.01■■□□□ 1.27
BRPF1-201ENST00000383829 ATAD2BQ9ULI0 1458 aa22.98■■□□□ 1.27
BRPF1-201ENST00000383829 SUPT16HQ9Y5B9 1047 aaKnown RBP22.97■■□□□ 1.27
BRPF1-201ENST00000383829 RAPGEF2Q9Y4G8 1499 aa22.97■■□□□ 1.27
BRPF1-201ENST00000383829 RAB3GAP2Q9H2M9 1393 aa22.96■■□□□ 1.27
BRPF1-201ENST00000383829 STAG3Q9UJ98 1225 aa22.94■■□□□ 1.26
BRPF1-201ENST00000383829 CCER2I3L3R5 266 aa22.94■■□□□ 1.26
BRPF1-201ENST00000383829 CARD11Q9BXL7 1154 aa22.94■■□□□ 1.26
BRPF1-201ENST00000383829 UPF2Q9HAU5 1272 aaKnown RBP22.93■■□□□ 1.26
BRPF1-201ENST00000383829 RUSC2Q8N2Y8 1516 aa22.93■■□□□ 1.26
BRPF1-201ENST00000383829 RGL3Q3MIN7 710 aa22.93■■□□□ 1.26
BRPF1-201ENST00000383829 KCNH8Q96L42 1107 aa22.91■■□□□ 1.26
BRPF1-201ENST00000383829 ESF1Q9H501 851 aaKnown RBP22.91■■□□□ 1.26
BRPF1-201ENST00000383829 BCL11AQ9H165 835 aa22.91■■□□□ 1.26
BRPF1-201ENST00000383829 FMN1Q68DA7 1419 aa22.91■■□□□ 1.26
BRPF1-201ENST00000383829 EIF4G1Q04637 1599 aaKnown RBP22.89■■□□□ 1.25
BRPF1-201ENST00000383829 SLC24A1O60721 1099 aa22.86■■□□□ 1.25
BRPF1-201ENST00000383829 CADPSQ9ULU8 1353 aa22.85■■□□□ 1.25
BRPF1-201ENST00000383829 CDCA8Q53HL2 280 aa22.84■■□□□ 1.25
BRPF1-201ENST00000383829 PPP4R2Q9NY27 417 aa22.83■■□□□ 1.24
BRPF1-201ENST00000383829 NBR1Q14596 966 aa22.79■■□□□ 1.24
BRPF1-201ENST00000383829 PDS5BQ9NTI5 1447 aa22.79■■□□□ 1.24
BRPF1-201ENST00000383829 PPP1R15AO75807 674 aaPredicted RBP22.78■■□□□ 1.24
BRPF1-201ENST00000383829 KNSTRNQ9Y448 316 aa22.78■■□□□ 1.24
BRPF1-201ENST00000383829 TDRD9Q8NDG6 1382 aaKnown RBP22.78■■□□□ 1.24
BRPF1-201ENST00000383829 HSPA5P11021 654 aaKnown RBP22.77■■□□□ 1.24
BRPF1-201ENST00000383829 DHX57Q6P158 1386 aaKnown RBP22.76■■□□□ 1.23
BRPF1-201ENST00000383829 ERCC6Q03468 1493 aa22.75■■□□□ 1.23
BRPF1-201ENST00000383829 ANP32EQ9BTT0 268 aa22.74■■□□□ 1.23
BRPF1-201ENST00000383829 HSP90AA1P07900 732 aaKnown RBP22.73■■□□□ 1.23
BRPF1-201ENST00000383829 FHOD3Q2V2M9 1422 aa22.71■■□□□ 1.23
BRPF1-201ENST00000383829 SENP3-EIF4A1A0A087X0R7 540 aa22.69■■□□□ 1.22
BRPF1-201ENST00000383829 MPHOSPH9Q99550 1183 aa22.68■■□□□ 1.22
BRPF1-201ENST00000383829 DCAF11Q8TEB1 546 aa22.68■■□□□ 1.22
BRPF1-201ENST00000383829 DDRGK1Q96HY6 314 aa22.65■■□□□ 1.22
BRPF1-201ENST00000383829 PKD2Q13563 968 aa22.63■■□□□ 1.21
BRPF1-201ENST00000383829 CFAP53Q96M91 514 aa22.63■■□□□ 1.21
BRPF1-201ENST00000383829 FOXD1Q16676 465 aa22.62■■□□□ 1.21
BRPF1-201ENST00000383829 CARMIL2Q6F5E8 1435 aa22.62■■□□□ 1.21
BRPF1-201ENST00000383829 TMF1P82094 1093 aa22.59■■□□□ 1.21
BRPF1-201ENST00000383829 ANP32BQ92688 251 aaKnown RBP22.59■■□□□ 1.21
BRPF1-201ENST00000383829 ERICH6BQ5W0A0 696 aa22.59■■□□□ 1.21
BRPF1-201ENST00000383829 B4GALNT3Q6L9W6 998 aa22.59■■□□□ 1.21
BRPF1-201ENST00000383829 CC2D1BQ5T0F9 858 aaKnown RBP22.55■■□□□ 1.2
BRPF1-201ENST00000383829 L3MBTL2Q969R5 705 aa22.54■■□□□ 1.2
BRPF1-201ENST00000383829 ANKRD30AQ9BXX3 1397 aa22.54■■□□□ 1.2
BRPF1-201ENST00000383829 BECN1Q14457 450 aa22.52■■□□□ 1.2
BRPF1-201ENST00000383829 IGF1RP08069 1367 aa22.52■■□□□ 1.2
BRPF1-201ENST00000383829 FANCD2Q9BXW9 1451 aa22.52■■□□□ 1.19
BRPF1-201ENST00000383829 MYH16Q9H6N6 1097 aa22.5■■□□□ 1.19
BRPF1-201ENST00000383829 CCDC18Q5T9S5 1454 aa22.5■■□□□ 1.19
BRPF1-201ENST00000383829 NUP155O75694 1391 aa22.5■■□□□ 1.19
BRPF1-201ENST00000383829 KIF21BO75037 1637 aa22.5■■□□□ 1.19
BRPF1-201ENST00000383829 RBM19Q9Y4C8 960 aaKnown RBP22.48■■□□□ 1.19
BRPF1-201ENST00000383829 KANK1Q14678 1352 aa22.45■■□□□ 1.19
BRPF1-201ENST00000383829 PPM1GO15355 546 aaPredicted RBP22.45■■□□□ 1.18
BRPF1-201ENST00000383829 KTN1Q86UP2 1357 aaKnown RBP22.44■■□□□ 1.18
BRPF1-201ENST00000383829 NOP58Q9Y2X3 529 aaKnown RBP22.44■■□□□ 1.18
BRPF1-201ENST00000383829 NCAPD3P42695 1498 aa22.43■■□□□ 1.18
BRPF1-201ENST00000383829 RALBP1Q15311 655 aa22.43■■□□□ 1.18
BRPF1-201ENST00000383829 NEUROD2Q15784 382 aa22.43■■□□□ 1.18
BRPF1-201ENST00000383829 FGD5Q6ZNL6 1462 aa22.42■■□□□ 1.18
BRPF1-201ENST00000383829 NUDCQ9Y266 331 aa22.42■■□□□ 1.18
BRPF1-201ENST00000383829 PLPPR3Q6T4P5 718 aa22.42■■□□□ 1.18
BRPF1-201ENST00000383829 SENP3Q9H4L4 574 aaPredicted RBP22.41■■□□□ 1.18
BRPF1-201ENST00000383829 EIF5BO60841 1220 aaKnown RBP22.4■■□□□ 1.18
BRPF1-201ENST00000383829 ROCK2O75116 1388 aaKnown RBP22.39■■□□□ 1.18
BRPF1-201ENST00000383829 FTSJ3Q8IY81 847 aaKnown RBP22.39■■□□□ 1.17
BRPF1-201ENST00000383829 MAPK8IP3Q9UPT6 1336 aa22.38■■□□□ 1.17
BRPF1-201ENST00000383829 TSHZ2Q9NRE2 1034 aa22.38■■□□□ 1.17
BRPF1-201ENST00000383829 ERICH3Q5RHP9 1530 aa22.37■■□□□ 1.17
BRPF1-201ENST00000383829 RSPH4AQ5TD94 716 aa22.36■■□□□ 1.17
BRPF1-201ENST00000383829 RGS3P49796 1198 aa22.35■■□□□ 1.17
BRPF1-201ENST00000383829 EFCAB2Q5VUJ9 269 aa22.35■■□□□ 1.17
BRPF1-201ENST00000383829 SYNJ1O43426 1573 aa22.34■■□□□ 1.17
BRPF1-201ENST00000383829 POGKQ9P215 609 aa22.33■■□□□ 1.17
BRPF1-201ENST00000383829 FRAT1Q92837 279 aaPredicted RBP22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms