RNA–Protein interactions for RNA: ENST00000381571.5

COMMD8-201, Transcript of COMM domain containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD8, Length 1,469 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD8-201ENST00000381571 CCDC61Q9Y6R9 512 aa12.73□□□□□ -0.37
COMMD8-201ENST00000381571 PHF12Q96QT6 1004 aa12.72□□□□□ -0.37
COMMD8-201ENST00000381571 GSE1Q14687 1217 aa12.72□□□□□ -0.37
COMMD8-201ENST00000381571 ZNF579Q8NAF0 562 aaKnown RBP12.72□□□□□ -0.37
COMMD8-201ENST00000381571 SP7Q8TDD2 431 aaPredicted RBP12.69□□□□□ -0.38
COMMD8-201ENST00000381571 PYGBP11216 843 aa12.65□□□□□ -0.38
COMMD8-201ENST00000381571 KIF12Q96FN5 646 aa12.62□□□□□ -0.39
COMMD8-201ENST00000381571 GABBR2O75899 941 aa12.6□□□□□ -0.39
COMMD8-201ENST00000381571 MAP3K13O43283 966 aa12.59□□□□□ -0.39
COMMD8-201ENST00000381571 PKD2Q13563 968 aa12.58□□□□□ -0.4
COMMD8-201ENST00000381571 GALR2O43603 387 aaPredicted RBP12.56□□□□□ -0.4
COMMD8-201ENST00000381571 MS4A3Q96HJ5 214 aa12.55□□□□□ -0.4
COMMD8-201ENST00000381571 CHRM1P11229 460 aaPredicted RBP12.54□□□□□ -0.4
COMMD8-201ENST00000381571 CLCN6P51797 869 aa12.54□□□□□ -0.4
COMMD8-201ENST00000381571 PCDHB13Q9Y5F0 798 aa12.54□□□□□ -0.4
COMMD8-201ENST00000381571 TRIM41Q8WV44 630 aa12.53□□□□□ -0.4
COMMD8-201ENST00000381571 ECM2O94769 699 aaPredicted RBP12.53□□□□□ -0.4
COMMD8-201ENST00000381571 IFNL1Q8IU54 200 aa12.5□□□□□ -0.41
COMMD8-201ENST00000381571 SGIP1Q9BQI5 828 aa12.49□□□□□ -0.41
COMMD8-201ENST00000381571 PCDHB8Q9UN66 801 aa12.48□□□□□ -0.41
COMMD8-201ENST00000381571 RTN4Q9NQC3 1192 aaKnown RBP12.47□□□□□ -0.41
COMMD8-201ENST00000381571 AMER1Q5JTC6 1135 aaPredicted RBP12.46□□□□□ -0.41
COMMD8-201ENST00000381571 TRPC6Q9Y210 931 aa12.46□□□□□ -0.42
COMMD8-201ENST00000381571 ZNF467Q7Z7K2 595 aaPredicted RBP12.44□□□□□ -0.42
COMMD8-201ENST00000381571 RNF25Q96BH1 459 aaPredicted RBP12.44□□□□□ -0.42
COMMD8-201ENST00000381571 RGL2O15211 777 aa12.41□□□□□ -0.42
COMMD8-201ENST00000381571 DCBLD2Q96PD2 775 aa12.4□□□□□ -0.43
COMMD8-201ENST00000381571 RIOK3O14730 519 aaKnown RBP12.39□□□□□ -0.43
COMMD8-201ENST00000381571 POTEIP0CG38 1075 aa12.35□□□□□ -0.43
COMMD8-201ENST00000381571 BMP2KQ9NSY1 1161 aaPredicted RBP12.35□□□□□ -0.43
COMMD8-201ENST00000381571 TIE1P35590 1138 aa12.34□□□□□ -0.43
COMMD8-201ENST00000381571 PSEN1P49768 467 aa12.33□□□□□ -0.44
COMMD8-201ENST00000381571 PDAP1Q13442 181 aaKnown RBP12.33□□□□□ -0.44
COMMD8-201ENST00000381571 TMEM106CQ9BVX2 250 aa12.33□□□□□ -0.44
COMMD8-201ENST00000381571 TTLL13PA6NNM8 815 aa12.32□□□□□ -0.44
COMMD8-201ENST00000381571 ATMINO43313 823 aaPredicted RBP12.31□□□□□ -0.44
COMMD8-201ENST00000381571 ASTLQ6HA08 431 aaPredicted RBP12.31□□□□□ -0.44
COMMD8-201ENST00000381571 VGFO15240 615 aaPredicted RBP12.3□□□□□ -0.44
COMMD8-201ENST00000381571 ATN1P54259 1190 aaPredicted RBP12.29□□□□□ -0.44
COMMD8-201ENST00000381571 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.27□□□□□ -0.44
COMMD8-201ENST00000381571 ZFP91Q96JP5 570 aaPredicted RBP12.27□□□□□ -0.44
COMMD8-201ENST00000381571 PELP1Q8IZL8 1130 aaKnown RBP12.27□□□□□ -0.45
COMMD8-201ENST00000381571 DCAF8L2P0C7V8 631 aa12.25□□□□□ -0.45
COMMD8-201ENST00000381571 TAOK2Q9UL54 1235 aa12.25□□□□□ -0.45
COMMD8-201ENST00000381571 TRIM35Q9UPQ4 493 aa12.24□□□□□ -0.45
COMMD8-201ENST00000381571 STK25O00506 426 aa12.21□□□□□ -0.46
COMMD8-201ENST00000381571 BCL11BQ9C0K0 894 aaPredicted RBP12.2□□□□□ -0.46
COMMD8-201ENST00000381571 CABP2Q9NPB3 220 aa12.2□□□□□ -0.46
COMMD8-201ENST00000381571 STK24Q9Y6E0 443 aa12.18□□□□□ -0.46
COMMD8-201ENST00000381571 GOLGA2Q08379 1002 aa12.17□□□□□ -0.46
COMMD8-201ENST00000381571 CHGAP10645 457 aaKnown RBP12.16□□□□□ -0.46
COMMD8-201ENST00000381571 SLC39A7Q92504 469 aa12.14□□□□□ -0.47
COMMD8-201ENST00000381571 METRNQ9UJH8 293 aa12.14□□□□□ -0.47
COMMD8-201ENST00000381571 MKRN3Q13064 507 aaKnown RBP12.13□□□□□ -0.47
COMMD8-201ENST00000381571 C7P10643 843 aa12.12□□□□□ -0.47
COMMD8-201ENST00000381571 HS6ST3Q8IZP7 471 aa12.11□□□□□ -0.47
COMMD8-201ENST00000381571 EFCAB3Q8N7B9 438 aa12.11□□□□□ -0.47
COMMD8-201ENST00000381571 IER5LQ5T953 404 aa12.09□□□□□ -0.47
COMMD8-201ENST00000381571 SEC24BO95487 1268 aa12.07□□□□□ -0.48
COMMD8-201ENST00000381571 COLQQ9Y215 455 aaPredicted RBP12.07□□□□□ -0.48
COMMD8-201ENST00000381571 POTEFA5A3E0 1075 aa12.05□□□□□ -0.48
COMMD8-201ENST00000381571 IRX5P78411 483 aaPredicted RBP12.05□□□□□ -0.48
COMMD8-201ENST00000381571 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.04□□□□□ -0.48
COMMD8-201ENST00000381571 PLCG2P16885 1265 aa12.02□□□□□ -0.48
COMMD8-201ENST00000381571 OCEL1Q9H607 264 aa12.02□□□□□ -0.49
COMMD8-201ENST00000381571 SOX12O15370 315 aa12.01□□□□□ -0.49
COMMD8-201ENST00000381571 PHF8Q9UPP1 1060 aa12.01□□□□□ -0.49
COMMD8-201ENST00000381571 PDCD7Q8N8D1 485 aaKnown RBP11.99□□□□□ -0.49
COMMD8-201ENST00000381571 MFRPQ9BY79 579 aa11.98□□□□□ -0.49
COMMD8-201ENST00000381571 POTEB2H3BUK9 544 aa11.97□□□□□ -0.49
COMMD8-201ENST00000381571 NKX1-1Q15270 411 aaPredicted RBP11.97□□□□□ -0.49
COMMD8-201ENST00000381571 ILDR1Q86SU0 546 aaPredicted RBP11.97□□□□□ -0.49
COMMD8-201ENST00000381571 DNAJC5Q9H3Z4 198 aa11.96□□□□□ -0.49
COMMD8-201ENST00000381571 NLRP6P59044 892 aa11.95□□□□□ -0.5
COMMD8-201ENST00000381571 DPY19L2Q6NUT2 758 aa11.95□□□□□ -0.5
COMMD8-201ENST00000381571 FBXO22Q8NEZ5 403 aa11.94□□□□□ -0.5
COMMD8-201ENST00000381571 MS4A4AQ96JQ5 239 aa11.94□□□□□ -0.5
COMMD8-201ENST00000381571 LHX8Q68G74 356 aa11.92□□□□□ -0.5
COMMD8-201ENST00000381571 POTEJP0CG39 1038 aa11.9□□□□□ -0.5
COMMD8-201ENST00000381571 BBXQ8WY36 941 aaPredicted RBP11.9□□□□□ -0.5
COMMD8-201ENST00000381571 GTPBP6O43824 516 aaPredicted RBP11.84□□□□□ -0.51
COMMD8-201ENST00000381571 L3MBTL3Q96JM7 780 aaPredicted RBP11.84□□□□□ -0.51
COMMD8-201ENST00000381571 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.83□□□□□ -0.52
COMMD8-201ENST00000381571 BOLA1Q9Y3E2 137 aa11.83□□□□□ -0.52
COMMD8-201ENST00000381571 PPP1R37O75864 691 aa11.83□□□□□ -0.52
COMMD8-201ENST00000381571 G3V3G9 751 aa11.81□□□□□ -0.52
COMMD8-201ENST00000381571 RYDENQ9NUL5 291 aaKnown RBP11.81□□□□□ -0.52
COMMD8-201ENST00000381571 MICALL2Q8IY33 904 aa11.78□□□□□ -0.52
COMMD8-201ENST00000381571 OTUD5Q96G74 571 aa11.78□□□□□ -0.52
COMMD8-201ENST00000381571 MAMSTRQ6ZN01 415 aa11.77□□□□□ -0.52
COMMD8-201ENST00000381571 PAXIP1Q6ZW49 1069 aaPredicted RBP11.77□□□□□ -0.52
COMMD8-201ENST00000381571 SCUBE2Q9NQ36 999 aa11.77□□□□□ -0.52
COMMD8-201ENST00000381571 SPRYD3Q8NCJ5 442 aa11.76□□□□□ -0.53
COMMD8-201ENST00000381571 CFAP44Q96MT7 982 aa11.76□□□□□ -0.53
COMMD8-201ENST00000381571 C3orf67Q6ZVT6 689 aa11.76□□□□□ -0.53
COMMD8-201ENST00000381571 TMEM121BQ9BXQ6 578 aaPredicted RBP11.76□□□□□ -0.53
COMMD8-201ENST00000381571 PLSCR2Q9NRY7 297 aa11.75□□□□□ -0.53
COMMD8-201ENST00000381571 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.73□□□□□ -0.53
COMMD8-201ENST00000381571 SLAIN1Q8ND83 568 aa11.69□□□□□ -0.54
COMMD8-201ENST00000381571 TMEM92Q6UXU6 159 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms