RNA–Protein interactions for RNA: ENST00000381285.8

ITSN1-204, Transcript of intersectin 1, humanhuman

TSL 5 BASIC

Gene ITSN1, Length 6,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-204ENST00000381285 FKBP8Q14318 412 aa20.7■□□□□ 0.9
ITSN1-204ENST00000381285 CDK11BP21127 795 aaKnown RBP20.68■□□□□ 0.9
ITSN1-204ENST00000381285 TPRNQ4KMQ1 711 aa20.65■□□□□ 0.9
ITSN1-204ENST00000381285 RGL3Q3MIN7 710 aa20.65■□□□□ 0.9
ITSN1-204ENST00000381285 SCRIBQ14160 1630 aa20.64■□□□□ 0.89
ITSN1-204ENST00000381285 RRP7BPQ9NSQ0 103 aa20.6■□□□□ 0.89
ITSN1-204ENST00000381285 EIF5BO60841 1220 aaKnown RBP20.6■□□□□ 0.89
ITSN1-204ENST00000381285 IRX6P78412 446 aaPredicted RBP20.58■□□□□ 0.89
ITSN1-204ENST00000381285 MYH16Q9H6N6 1097 aa20.58■□□□□ 0.88
ITSN1-204ENST00000381285 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.58■□□□□ 0.88
ITSN1-204ENST00000381285 MLECQ14165 292 aa20.55■□□□□ 0.88
ITSN1-204ENST00000381285 NCBP3Q53F19 620 aaKnown RBP20.53■□□□□ 0.88
ITSN1-204ENST00000381285 LAS1LQ9Y4W2 734 aaKnown RBP20.52■□□□□ 0.88
ITSN1-204ENST00000381285 CCDC136Q96JN2 1154 aa20.5■□□□□ 0.87
ITSN1-204ENST00000381285 NBR1Q14596 966 aa20.5■□□□□ 0.87
ITSN1-204ENST00000381285 MTUS2Q5JR59 1369 aa20.5■□□□□ 0.87
ITSN1-204ENST00000381285 MRS2Q9HD23 443 aa20.49■□□□□ 0.87
ITSN1-204ENST00000381285 SOX12O15370 315 aa20.47■□□□□ 0.87
ITSN1-204ENST00000381285 TNNT2P45379 298 aaPredicted RBP20.44■□□□□ 0.86
ITSN1-204ENST00000381285 NEUROD2Q15784 382 aa20.44■□□□□ 0.86
ITSN1-204ENST00000381285 PLEKHD1A6NEE1 506 aa20.41■□□□□ 0.86
ITSN1-204ENST00000381285 POGKQ9P215 609 aa20.37■□□□□ 0.85
ITSN1-204ENST00000381285 ACIN1Q9UKV3 1341 aaKnown RBP20.3■□□□□ 0.84
ITSN1-204ENST00000381285 NCLP19338 710 aaKnown RBP20.3■□□□□ 0.84
ITSN1-204ENST00000381285 SAFB2Q14151 953 aaKnown RBP eCLIP20.27■□□□□ 0.84
ITSN1-204ENST00000381285 ISY1Q9ULR0 285 aaKnown RBP20.27■□□□□ 0.84
ITSN1-204ENST00000381285 ERCC6Q03468 1493 aa20.26■□□□□ 0.83
ITSN1-204ENST00000381285 CLSTN1O94985 981 aa20.26■□□□□ 0.83
ITSN1-204ENST00000381285 GOLGA2Q08379 1002 aa20.26■□□□□ 0.83
ITSN1-204ENST00000381285 NAP1L2Q9ULW6 460 aaPredicted RBP20.26■□□□□ 0.83
ITSN1-204ENST00000381285 CFAP53Q96M91 514 aa20.25■□□□□ 0.83
ITSN1-204ENST00000381285 OS9Q13438 667 aaPredicted RBP20.23■□□□□ 0.83
ITSN1-204ENST00000381285 CFDP1Q9UEE9 299 aaPredicted RBP20.23■□□□□ 0.83
ITSN1-204ENST00000381285 KNSTRNQ9Y448 316 aa20.21■□□□□ 0.83
ITSN1-204ENST00000381285 FTSJ3Q8IY81 847 aaKnown RBP20.21■□□□□ 0.83
ITSN1-204ENST00000381285 EIF4G2P78344 907 aaKnown RBP eCLIP20.21■□□□□ 0.83
ITSN1-204ENST00000381285 U2SURPO15042 1029 aaKnown RBP20.2■□□□□ 0.82
ITSN1-204ENST00000381285 CCDC9Q9Y3X0 531 aaKnown RBP20.2■□□□□ 0.82
ITSN1-204ENST00000381285 ZNF330Q9Y3S2 320 aaPredicted RBP20.19■□□□□ 0.82
ITSN1-204ENST00000381285 ZRSR1Q15695 479 aaKnown RBP20.19■□□□□ 0.82
ITSN1-204ENST00000381285 MAPK8IP3Q9UPT6 1336 aa20.19■□□□□ 0.82
ITSN1-204ENST00000381285 AMER1Q5JTC6 1135 aaPredicted RBP20.16■□□□□ 0.82
ITSN1-204ENST00000381285 CC2D1BQ5T0F9 858 aaKnown RBP20.15■□□□□ 0.82
ITSN1-204ENST00000381285 FRAT1Q92837 279 aaPredicted RBP20.15■□□□□ 0.82
ITSN1-204ENST00000381285 CARD11Q9BXL7 1154 aa20.15■□□□□ 0.82
ITSN1-204ENST00000381285 PAK3O75914 559 aaPredicted RBP20.14■□□□□ 0.81
ITSN1-204ENST00000381285 FGD1P98174 961 aa20.12■□□□□ 0.81
ITSN1-204ENST00000381285 STK26Q9P289 416 aa20.11■□□□□ 0.81
ITSN1-204ENST00000381285 CASC1Q6TDU7 716 aa20.1■□□□□ 0.81
ITSN1-204ENST00000381285 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.09■□□□□ 0.81
ITSN1-204ENST00000381285 PLCB2Q00722 1185 aa20.08■□□□□ 0.8
ITSN1-204ENST00000381285 SRPK2P78362 688 aaKnown RBP20.07■□□□□ 0.8
ITSN1-204ENST00000381285 KCNJ4P48050 445 aa20.06■□□□□ 0.8
ITSN1-204ENST00000381285 ZCCHC6Q5VYS8 1495 aaKnown RBP20.06■□□□□ 0.8
ITSN1-204ENST00000381285 GGT6Q6P531 493 aa20.06■□□□□ 0.8
ITSN1-204ENST00000381285 CSB-PGBD3P0DP91 1061 aa20.06■□□□□ 0.8
ITSN1-204ENST00000381285 NUDCQ9Y266 331 aa20.05■□□□□ 0.8
ITSN1-204ENST00000381285 PTMAP06454 111 aaKnown RBP20.03■□□□□ 0.8
ITSN1-204ENST00000381285 MIER1Q8N108 512 aa20.01■□□□□ 0.79
ITSN1-204ENST00000381285 RGS3P49796 1198 aa20■□□□□ 0.79
ITSN1-204ENST00000381285 BECN1Q14457 450 aa20■□□□□ 0.79
ITSN1-204ENST00000381285 CDCA8Q53HL2 280 aa20■□□□□ 0.79
ITSN1-204ENST00000381285 CLIP1P30622 1438 aa20■□□□□ 0.79
ITSN1-204ENST00000381285 GOLGA6L22H0YM25 854 aa19.98■□□□□ 0.79
ITSN1-204ENST00000381285 APBB1O00213 710 aa19.97■□□□□ 0.79
ITSN1-204ENST00000381285 TRIM44Q96DX7 344 aaPredicted RBP19.96■□□□□ 0.79
ITSN1-204ENST00000381285 RSF1Q96T23 1441 aaPredicted RBP19.96■□□□□ 0.79
ITSN1-204ENST00000381285 DNTTIP2Q5QJE6 756 aaKnown RBP19.94■□□□□ 0.78
ITSN1-204ENST00000381285 EIF4G1Q04637 1599 aaKnown RBP19.93■□□□□ 0.78
ITSN1-204ENST00000381285 DCAF11Q8TEB1 546 aa19.92■□□□□ 0.78
ITSN1-204ENST00000381285 NUTM2DQ5VT03 806 aaPredicted RBP19.91■□□□□ 0.78
ITSN1-204ENST00000381285 SIN3AQ96ST3 1273 aa19.9■□□□□ 0.78
ITSN1-204ENST00000381285 HDGFP51858 240 aaKnown RBP19.89■□□□□ 0.77
ITSN1-204ENST00000381285 RTF1Q92541 710 aaKnown RBP19.88■□□□□ 0.77
ITSN1-204ENST00000381285 TMX4Q9H1E5 349 aaPredicted RBP19.87■□□□□ 0.77
ITSN1-204ENST00000381285 NUTM2FA1L443 756 aa19.87■□□□□ 0.77
ITSN1-204ENST00000381285 AEBP2Q6ZN18 517 aaPredicted RBP19.85■□□□□ 0.77
ITSN1-204ENST00000381285 SPRYD3Q8NCJ5 442 aa19.85■□□□□ 0.77
ITSN1-204ENST00000381285 SUPT16HQ9Y5B9 1047 aaKnown RBP19.85■□□□□ 0.77
ITSN1-204ENST00000381285 G3V3G9 751 aa19.84■□□□□ 0.77
ITSN1-204ENST00000381285 DCAF8Q5TAQ9 597 aa19.84■□□□□ 0.77
ITSN1-204ENST00000381285 KANK1Q14678 1352 aa19.84■□□□□ 0.77
ITSN1-204ENST00000381285 CHMP3Q9Y3E7 222 aa19.83■□□□□ 0.77
ITSN1-204ENST00000381285 DDRGK1Q96HY6 314 aa19.83■□□□□ 0.76
ITSN1-204ENST00000381285 HSP90AB1P08238 724 aaKnown RBP19.83■□□□□ 0.76
ITSN1-204ENST00000381285 ANO8Q9HCE9 1232 aaPredicted RBP19.83■□□□□ 0.76
ITSN1-204ENST00000381285 MORC1Q86VD1 984 aa19.82■□□□□ 0.76
ITSN1-204ENST00000381285 PRM3Q9NNZ6 103 aa19.81■□□□□ 0.76
ITSN1-204ENST00000381285 PDE4CQ08493 712 aa19.8■□□□□ 0.76
ITSN1-204ENST00000381285 MSH5O43196 834 aa19.79■□□□□ 0.76
ITSN1-204ENST00000381285 CCNB3Q8WWL7 1395 aa19.79■□□□□ 0.76
ITSN1-204ENST00000381285 GNL2Q13823 731 aaKnown RBP19.78■□□□□ 0.76
ITSN1-204ENST00000381285 GLIPR1L2Q4G1C9 344 aa19.78■□□□□ 0.76
ITSN1-204ENST00000381285 LTV1Q96GA3 475 aaPredicted RBP19.77■□□□□ 0.76
ITSN1-204ENST00000381285 TMF1P82094 1093 aa19.75■□□□□ 0.75
ITSN1-204ENST00000381285 FOXD1Q16676 465 aa19.75■□□□□ 0.75
ITSN1-204ENST00000381285 GOLGA6L4A6NEF3 574 aa19.75■□□□□ 0.75
ITSN1-204ENST00000381285 BAZ1BQ9UIG0 1483 aaKnown RBP19.75■□□□□ 0.75
ITSN1-204ENST00000381285 PNNQ9H307 717 aaKnown RBP19.74■□□□□ 0.75
ITSN1-204ENST00000381285 ERICH6BQ5W0A0 696 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms