RNA–Protein interactions for RNA: ENST00000380650.4

RPAP3-202, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene RPAP3, Length 2,149 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-202ENST00000380650 CD44P16070 742 aaKnown RBP7.36□□□□□ -1.23
RPAP3-202ENST00000380650 MIER1Q8N108 512 aa7.36□□□□□ -1.23
RPAP3-202ENST00000380650 CUX2O14529 1486 aa7.34□□□□□ -1.23
RPAP3-202ENST00000380650 PLCD3Q8N3E9 789 aa7.33□□□□□ -1.24
RPAP3-202ENST00000380650 ZBTB47Q9UFB7 747 aaPredicted RBP7.32□□□□□ -1.24
RPAP3-202ENST00000380650 CLCN6P51797 869 aa7.31□□□□□ -1.24
RPAP3-202ENST00000380650 PAK3O75914 559 aaPredicted RBP7.3□□□□□ -1.24
RPAP3-202ENST00000380650 ZNF579Q8NAF0 562 aaKnown RBP7.3□□□□□ -1.24
RPAP3-202ENST00000380650 ZRANB1Q9UGI0 708 aa7.29□□□□□ -1.24
RPAP3-202ENST00000380650 VASPP50552 380 aaPredicted RBP7.27□□□□□ -1.25
RPAP3-202ENST00000380650 GABBR2O75899 941 aa7.27□□□□□ -1.25
RPAP3-202ENST00000380650 NUBP1P53384 320 aa7.21□□□□□ -1.25
RPAP3-202ENST00000380650 RASEFQ8IZ41 740 aa7.21□□□□□ -1.25
RPAP3-202ENST00000380650 TSPYL2Q9H2G4 693 aaPredicted RBP7.2□□□□□ -1.26
RPAP3-202ENST00000380650 CCDC61Q9Y6R9 512 aa7.19□□□□□ -1.26
RPAP3-202ENST00000380650 PHF12Q96QT6 1004 aa7.19□□□□□ -1.26
RPAP3-202ENST00000380650 KLHL34Q8N239 644 aa7.18□□□□□ -1.26
RPAP3-202ENST00000380650 FAM212AQ96EL1 285 aa7.17□□□□□ -1.26
RPAP3-202ENST00000380650 LHX8Q68G74 356 aa7.16□□□□□ -1.26
RPAP3-202ENST00000380650 GALR2O43603 387 aaPredicted RBP7.14□□□□□ -1.27
RPAP3-202ENST00000380650 IFNLR1Q8IU57 520 aaPredicted RBP7.14□□□□□ -1.27
RPAP3-202ENST00000380650 RBAK-RBAKDNI3L0D1 243 aa7.13□□□□□ -1.27
RPAP3-202ENST00000380650 KIF12Q96FN5 646 aa7.13□□□□□ -1.27
RPAP3-202ENST00000380650 SPOCK2Q92563 424 aa7.12□□□□□ -1.27
RPAP3-202ENST00000380650 DCBLD2Q96PD2 775 aa7.12□□□□□ -1.27
RPAP3-202ENST00000380650 GSE1Q14687 1217 aa7.11□□□□□ -1.27
RPAP3-202ENST00000380650 MS4A3Q96HJ5 214 aa7.11□□□□□ -1.27
RPAP3-202ENST00000380650 SGIP1Q9BQI5 828 aa7.11□□□□□ -1.27
RPAP3-202ENST00000380650 DCAF8Q5TAQ9 597 aa7.1□□□□□ -1.27
RPAP3-202ENST00000380650 POTEIP0CG38 1075 aa7.1□□□□□ -1.27
RPAP3-202ENST00000380650 MPNDQ8N594 471 aa7.1□□□□□ -1.27
RPAP3-202ENST00000380650 MAP3K13O43283 966 aa7.08□□□□□ -1.28
RPAP3-202ENST00000380650 HECW2Q9P2P5 1572 aa7.07□□□□□ -1.28
RPAP3-202ENST00000380650 ASTLQ6HA08 431 aaPredicted RBP7.05□□□□□ -1.28
RPAP3-202ENST00000380650 PCDHB13Q9Y5F0 798 aa7.05□□□□□ -1.28
RPAP3-202ENST00000380650 CHRM1P11229 460 aaPredicted RBP7.04□□□□□ -1.28
RPAP3-202ENST00000380650 TIE1P35590 1138 aa7.03□□□□□ -1.28
RPAP3-202ENST00000380650 ATMINO43313 823 aaPredicted RBP7.03□□□□□ -1.28
RPAP3-202ENST00000380650 PYGBP11216 843 aa7.02□□□□□ -1.29
RPAP3-202ENST00000380650 IFNL1Q8IU54 200 aa7.01□□□□□ -1.29
RPAP3-202ENST00000380650 BMP2KQ9NSY1 1161 aaPredicted RBP7□□□□□ -1.29
RPAP3-202ENST00000380650 CIZ1Q9ULV3 898 aaPredicted RBP7□□□□□ -1.29
RPAP3-202ENST00000380650 TRPC6Q9Y210 931 aa7□□□□□ -1.29
RPAP3-202ENST00000380650 ZNF467Q7Z7K2 595 aaPredicted RBP6.98□□□□□ -1.29
RPAP3-202ENST00000380650 PELP1Q8IZL8 1130 aaKnown RBP6.98□□□□□ -1.29
RPAP3-202ENST00000380650 SLC39A7Q92504 469 aa6.98□□□□□ -1.29
RPAP3-202ENST00000380650 TTLL13PA6NNM8 815 aa6.97□□□□□ -1.29
RPAP3-202ENST00000380650 ATN1P54259 1190 aaPredicted RBP6.97□□□□□ -1.29
RPAP3-202ENST00000380650 C7P10643 843 aa6.97□□□□□ -1.29
RPAP3-202ENST00000380650 PCDHB8Q9UN66 801 aa6.95□□□□□ -1.3
RPAP3-202ENST00000380650 TMEM106CQ9BVX2 250 aa6.94□□□□□ -1.3
RPAP3-202ENST00000380650 METRNQ9UJH8 293 aa6.94□□□□□ -1.3
RPAP3-202ENST00000380650 IER5LQ5T953 404 aa6.92□□□□□ -1.3
RPAP3-202ENST00000380650 TRIM35Q9UPQ4 493 aa6.92□□□□□ -1.3
RPAP3-202ENST00000380650 PDAP1Q13442 181 aaKnown RBP6.9□□□□□ -1.3
RPAP3-202ENST00000380650 PSEN1P49768 467 aa6.89□□□□□ -1.31
RPAP3-202ENST00000380650 SYNJ2O15056 1496 aa6.89□□□□□ -1.31
RPAP3-202ENST00000380650 RIOK3O14730 519 aaKnown RBP6.86□□□□□ -1.31
RPAP3-202ENST00000380650 KDM4FA0A1W2PPD8 638 aa6.85□□□□□ -1.31
RPAP3-202ENST00000380650 POTEFA5A3E0 1075 aa6.85□□□□□ -1.31
RPAP3-202ENST00000380650 POTEB2H3BUK9 544 aa6.85□□□□□ -1.31
RPAP3-202ENST00000380650 SEC24BO95487 1268 aa6.85□□□□□ -1.31
RPAP3-202ENST00000380650 IRX5P78411 483 aaPredicted RBP6.83□□□□□ -1.32
RPAP3-202ENST00000380650 GOLGA2Q08379 1002 aa6.83□□□□□ -1.32
RPAP3-202ENST00000380650 PKD2Q13563 968 aa6.83□□□□□ -1.32
RPAP3-202ENST00000380650 MAMSTRQ6ZN01 415 aa6.83□□□□□ -1.32
RPAP3-202ENST00000380650 RNF25Q96BH1 459 aaPredicted RBP6.83□□□□□ -1.32
RPAP3-202ENST00000380650 COLQQ9Y215 455 aaPredicted RBP6.83□□□□□ -1.32
RPAP3-202ENST00000380650 VGFO15240 615 aaPredicted RBP6.83□□□□□ -1.32
RPAP3-202ENST00000380650 ECM2O94769 699 aaPredicted RBP6.83□□□□□ -1.32
RPAP3-202ENST00000380650 TAOK2Q9UL54 1235 aa6.83□□□□□ -1.32
RPAP3-202ENST00000380650 PLCG2P16885 1265 aa6.82□□□□□ -1.32
RPAP3-202ENST00000380650 MKRN3Q13064 507 aaKnown RBP6.82□□□□□ -1.32
RPAP3-202ENST00000380650 OCEL1Q9H607 264 aa6.82□□□□□ -1.32
RPAP3-202ENST00000380650 POTEJP0CG39 1038 aa6.8□□□□□ -1.32
RPAP3-202ENST00000380650 OTUD5Q96G74 571 aa6.8□□□□□ -1.32
RPAP3-202ENST00000380650 CABP2Q9NPB3 220 aa6.79□□□□□ -1.32
RPAP3-202ENST00000380650 SCUBE2Q9NQ36 999 aa6.79□□□□□ -1.32
RPAP3-202ENST00000380650 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.77□□□□□ -1.33
RPAP3-202ENST00000380650 ZFP91Q96JP5 570 aaPredicted RBP6.77□□□□□ -1.33
RPAP3-202ENST00000380650 PDCD7Q8N8D1 485 aaKnown RBP6.76□□□□□ -1.33
RPAP3-202ENST00000380650 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.76□□□□□ -1.338e-6■■■□□ 14.7
RPAP3-202ENST00000380650 COL26A1Q96A83 441 aa6.76□□□□□ -1.33
RPAP3-202ENST00000380650 RGL2O15211 777 aa6.75□□□□□ -1.33
RPAP3-202ENST00000380650 L3MBTL3Q96JM7 780 aaPredicted RBP6.74□□□□□ -1.33
RPAP3-202ENST00000380650 EFCAB3Q8N7B9 438 aa6.73□□□□□ -1.33
RPAP3-202ENST00000380650 POTEMA6NI47 508 aa6.73□□□□□ -1.33
RPAP3-202ENST00000380650 SOX12O15370 315 aa6.73□□□□□ -1.33
RPAP3-202ENST00000380650 BCL11BQ9C0K0 894 aaPredicted RBP6.72□□□□□ -1.33
RPAP3-202ENST00000380650 PITPNM2Q9BZ72 1349 aa6.7□□□□□ -1.34
RPAP3-202ENST00000380650 STK25O00506 426 aa6.7□□□□□ -1.34
RPAP3-202ENST00000380650 POTEGQ6S5H5 508 aa6.7□□□□□ -1.34
RPAP3-202ENST00000380650 STK24Q9Y6E0 443 aa6.7□□□□□ -1.34
RPAP3-202ENST00000380650 SENP3-EIF4A1A0A087X0R7 540 aa6.69□□□□□ -1.34
RPAP3-202ENST00000380650 ABCC9O60706 1549 aa6.68□□□□□ -1.34
RPAP3-202ENST00000380650 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.68□□□□□ -1.34
RPAP3-202ENST00000380650 NLRP6P59044 892 aa6.67□□□□□ -1.34
RPAP3-202ENST00000380650 DPY19L2Q6NUT2 758 aa6.67□□□□□ -1.34
RPAP3-202ENST00000380650 UNC79Q9P2D8 2635 aa6.66□□□□□ -1.34
RPAP3-202ENST00000380650 G3V3G9 751 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms