RNA–Protein interactions for RNA: ENST00000377619.9

COMMD6-204, Transcript of COMM domain containing 6, humanhuman

TSL 2 BASIC

Gene COMMD6, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-204ENST00000377619 ASTLQ6HA08 431 aaPredicted RBP13.94□□□□□ -0.18
COMMD6-204ENST00000377619 OTUD5Q96G74 571 aa13.94□□□□□ -0.18
COMMD6-204ENST00000377619 ATMINO43313 823 aaPredicted RBP13.93□□□□□ -0.18
COMMD6-204ENST00000377619 KIF12Q96FN5 646 aa13.91□□□□□ -0.18
COMMD6-204ENST00000377619 RASEFQ8IZ41 740 aa13.89□□□□□ -0.19
COMMD6-204ENST00000377619 PLCD3Q8N3E9 789 aa13.89□□□□□ -0.19
COMMD6-204ENST00000377619 METRNQ9UJH8 293 aa13.88□□□□□ -0.19
COMMD6-204ENST00000377619 C7P10643 843 aa13.86□□□□□ -0.19
COMMD6-204ENST00000377619 SLC39A7Q92504 469 aa13.86□□□□□ -0.19
COMMD6-204ENST00000377619 MAP3K13O43283 966 aa13.83□□□□□ -0.2
COMMD6-204ENST00000377619 ATN1P54259 1190 aaPredicted RBP13.83□□□□□ -0.2
COMMD6-204ENST00000377619 FKBP8Q14318 412 aa13.82□□□□□ -0.2
COMMD6-204ENST00000377619 TRPC6Q9Y210 931 aa13.81□□□□□ -0.2
COMMD6-204ENST00000377619 BMP2KQ9NSY1 1161 aaPredicted RBP13.78□□□□□ -0.2
COMMD6-204ENST00000377619 POTEJP0CG39 1038 aa13.77□□□□□ -0.21
COMMD6-204ENST00000377619 NUBP1P53384 320 aa13.74□□□□□ -0.21
COMMD6-204ENST00000377619 ZBTB47Q9UFB7 747 aaPredicted RBP13.74□□□□□ -0.21
COMMD6-204ENST00000377619 TIE1P35590 1138 aa13.72□□□□□ -0.21
COMMD6-204ENST00000377619 MAMSTRQ6ZN01 415 aa13.68□□□□□ -0.22
COMMD6-204ENST00000377619 POTEFA5A3E0 1075 aa13.67□□□□□ -0.22
COMMD6-204ENST00000377619 PCDHB13Q9Y5F0 798 aa13.67□□□□□ -0.22
COMMD6-204ENST00000377619 TTLL13PA6NNM8 815 aa13.66□□□□□ -0.22
COMMD6-204ENST00000377619 SGIP1Q9BQI5 828 aa13.65□□□□□ -0.22
COMMD6-204ENST00000377619 PLSCR2Q9NRY7 297 aa13.63□□□□□ -0.23
COMMD6-204ENST00000377619 FAM212AQ96EL1 285 aa13.62□□□□□ -0.23
COMMD6-204ENST00000377619 POTEMA6NI47 508 aa13.6□□□□□ -0.23
COMMD6-204ENST00000377619 SCUBE2Q9NQ36 999 aa13.6□□□□□ -0.23
COMMD6-204ENST00000377619 IFNL1Q8IU54 200 aa13.59□□□□□ -0.23
COMMD6-204ENST00000377619 COLQQ9Y215 455 aaPredicted RBP13.59□□□□□ -0.23
COMMD6-204ENST00000377619 SEC24BO95487 1268 aa13.58□□□□□ -0.24
COMMD6-204ENST00000377619 TRIM35Q9UPQ4 493 aa13.58□□□□□ -0.24
COMMD6-204ENST00000377619 POTEGQ6S5H5 508 aa13.57□□□□□ -0.24
COMMD6-204ENST00000377619 DCAF8Q5TAQ9 597 aa13.55□□□□□ -0.24
COMMD6-204ENST00000377619 FBXO3Q9UK99 471 aa13.55□□□□□ -0.24
COMMD6-204ENST00000377619 IER5LQ5T953 404 aa13.51□□□□□ -0.25
COMMD6-204ENST00000377619 FAM163AQ96GL9 167 aaPredicted RBP13.51□□□□□ -0.25
COMMD6-204ENST00000377619 TMEM106CQ9BVX2 250 aa13.51□□□□□ -0.25
COMMD6-204ENST00000377619 PYGBP11216 843 aa13.48□□□□□ -0.25
COMMD6-204ENST00000377619 LCE2DQ5TA82 110 aaPredicted RBP13.45□□□□□ -0.26
COMMD6-204ENST00000377619 KLHL34Q8N239 644 aa13.42□□□□□ -0.26
COMMD6-204ENST00000377619 VASPP50552 380 aaPredicted RBP13.4□□□□□ -0.26
COMMD6-204ENST00000377619 PCDHB8Q9UN66 801 aa13.4□□□□□ -0.26
COMMD6-204ENST00000377619 PLCG2P16885 1265 aa13.38□□□□□ -0.27
COMMD6-204ENST00000377619 IRX5P78411 483 aaPredicted RBP13.36□□□□□ -0.27
COMMD6-204ENST00000377619 PCDH10Q9P2E7 1040 aa13.36□□□□□ -0.27
COMMD6-204ENST00000377619 GSE1Q14687 1217 aa13.32□□□□□ -0.28
COMMD6-204ENST00000377619 SLAIN1Q8ND83 568 aa13.32□□□□□ -0.28
COMMD6-204ENST00000377619 OCEL1Q9H607 264 aa13.3□□□□□ -0.28
COMMD6-204ENST00000377619 ZNF467Q7Z7K2 595 aaPredicted RBP13.24□□□□□ -0.29
COMMD6-204ENST00000377619 CHRM1P11229 460 aaPredicted RBP13.23□□□□□ -0.29
COMMD6-204ENST00000377619 ST18O60284 1047 aa13.19□□□□□ -0.3
COMMD6-204ENST00000377619 IFNLR1Q8IU57 520 aaPredicted RBP13.17□□□□□ -0.3
COMMD6-204ENST00000377619 PSEN1P49768 467 aa13.16□□□□□ -0.3
COMMD6-204ENST00000377619 GOLGA2Q08379 1002 aa13.16□□□□□ -0.3
COMMD6-204ENST00000377619 MKRN3Q13064 507 aaKnown RBP13.16□□□□□ -0.3
COMMD6-204ENST00000377619 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.16□□□□□ -0.3
COMMD6-204ENST00000377619 SPOCK2Q92563 424 aa13.15□□□□□ -0.3
COMMD6-204ENST00000377619 CDAN1Q8IWY9 1227 aa13.14□□□□□ -0.31
COMMD6-204ENST00000377619 PDCD7Q8N8D1 485 aaKnown RBP13.14□□□□□ -0.31
COMMD6-204ENST00000377619 CIZ1Q9ULV3 898 aaPredicted RBP13.13□□□□□ -0.31
COMMD6-204ENST00000377619 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.1□□□□□ -0.31
COMMD6-204ENST00000377619 PDAP1Q13442 181 aaKnown RBP13.07□□□□□ -0.32
COMMD6-204ENST00000377619 L3MBTL3Q96JM7 780 aaPredicted RBP13.07□□□□□ -0.32
COMMD6-204ENST00000377619 SNPHO15079 494 aa13.06□□□□□ -0.32
COMMD6-204ENST00000377619 C3orf67Q6ZVT6 689 aa13.04□□□□□ -0.32
COMMD6-204ENST00000377619 TMEM121BQ9BXQ6 578 aaPredicted RBP13.01□□□□□ -0.33
COMMD6-204ENST00000377619 CABP2Q9NPB3 220 aa13.01□□□□□ -0.33
COMMD6-204ENST00000377619 DPY19L2Q6NUT2 758 aa12.99□□□□□ -0.33
COMMD6-204ENST00000377619 ILDR1Q86SU0 546 aaPredicted RBP12.98□□□□□ -0.33
COMMD6-204ENST00000377619 MARVELD3Q96A59 401 aa12.98□□□□□ -0.33
COMMD6-204ENST00000377619 BOLA1Q9Y3E2 137 aa12.89□□□□□ -0.35
COMMD6-204ENST00000377619 G3V3G9 751 aa12.88□□□□□ -0.35
COMMD6-204ENST00000377619 TRIM41Q8WV44 630 aa12.87□□□□□ -0.35
COMMD6-204ENST00000377619 EFCAB3Q8N7B9 438 aa12.85□□□□□ -0.35
COMMD6-204ENST00000377619 EMP3P54852 163 aa12.84□□□□□ -0.35
COMMD6-204ENST00000377619 SPNS2Q8IVW8 549 aa12.82□□□□□ -0.36
COMMD6-204ENST00000377619 POTEB3A0JP26 581 aa12.79□□□□□ -0.36
COMMD6-204ENST00000377619 FAM205CA6NFA0 338 aa12.79□□□□□ -0.36
COMMD6-204ENST00000377619 POTEBQ6S5H4 581 aa12.79□□□□□ -0.36
COMMD6-204ENST00000377619 MMRN1Q13201 1228 aa12.78□□□□□ -0.36
COMMD6-204ENST00000377619 HS3ST6Q96QI5 342 aa12.77□□□□□ -0.37
COMMD6-204ENST00000377619 HOXB3P14651 431 aaPredicted RBP12.76□□□□□ -0.37
COMMD6-204ENST00000377619 RIOK3O14730 519 aaKnown RBP12.74□□□□□ -0.37
COMMD6-204ENST00000377619 RNF25Q96BH1 459 aaPredicted RBP12.74□□□□□ -0.37
COMMD6-204ENST00000377619 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.71□□□□□ -0.37
COMMD6-204ENST00000377619 ZFP91Q96JP5 570 aaPredicted RBP12.71□□□□□ -0.37
COMMD6-204ENST00000377619 ZNF710Q8N1W2 664 aa12.7□□□□□ -0.38
COMMD6-204ENST00000377619 SOX12O15370 315 aa12.69□□□□□ -0.38
COMMD6-204ENST00000377619 KRTAP3-3Q9BYR6 98 aa12.69□□□□□ -0.38
COMMD6-204ENST00000377619 KRTAP3-2Q9BYR7 98 aa12.69□□□□□ -0.38
COMMD6-204ENST00000377619 VGFO15240 615 aaPredicted RBP12.68□□□□□ -0.38
COMMD6-204ENST00000377619 HOXB1P14653 301 aaPredicted RBP12.67□□□□□ -0.38
COMMD6-204ENST00000377619 DOK7Q18PE1 504 aa12.67□□□□□ -0.38
COMMD6-204ENST00000377619 MICALL2Q8IY33 904 aa12.67□□□□□ -0.38
COMMD6-204ENST00000377619 TMEM92Q6UXU6 159 aa12.65□□□□□ -0.38
COMMD6-204ENST00000377619 MS4A4AQ96JQ5 239 aa12.65□□□□□ -0.38
COMMD6-204ENST00000377619 PHF8Q9UPP1 1060 aa12.65□□□□□ -0.38
COMMD6-204ENST00000377619 ERBB3P21860 1342 aa12.61□□□□□ -0.39
COMMD6-204ENST00000377619 RIMBP2O15034 1052 aa12.59□□□□□ -0.39
COMMD6-204ENST00000377619 BCL11BQ9C0K0 894 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms