RNA–Protein interactions for RNA: ENST00000375436.8

RCC2-202, Transcript of regulator of chromosome condensation 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RCC2, Length 4,087 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC2-202ENST00000375436 WRNQ14191 1432 aaPredicted RBP eCLIP21.56■■□□□ 1.04
RCC2-202ENST00000375436 GOLGA3Q08378 1498 aa21.53■■□□□ 1.04
RCC2-202ENST00000375436 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.51■■□□□ 1.035e-10■□□□□ 10.4
RCC2-202ENST00000375436 MRS2Q9HD23 443 aa21.47■■□□□ 1.03
RCC2-202ENST00000375436 NCAPD3P42695 1498 aa21.46■■□□□ 1.03
RCC2-202ENST00000375436 NBR1Q14596 966 aa21.46■■□□□ 1.03
RCC2-202ENST00000375436 EEA1Q15075 1411 aa21.44■■□□□ 1.02
RCC2-202ENST00000375436 MTUS2Q5JR59 1369 aa21.43■■□□□ 1.02
RCC2-202ENST00000375436 KANK4Q5T7N3 995 aaPredicted RBP21.4■■□□□ 1.02
RCC2-202ENST00000375436 CHGAP10645 457 aaKnown RBP21.4■■□□□ 1.02
RCC2-202ENST00000375436 HMGXB3Q12766 1538 aa21.38■■□□□ 1.01
RCC2-202ENST00000375436 CANXP27824 592 aaKnown RBP21.35■■□□□ 1.01
RCC2-202ENST00000375436 SUPT16HQ9Y5B9 1047 aaKnown RBP21.34■■□□□ 1.01
RCC2-202ENST00000375436 TMC1Q8TDI8 760 aa21.34■■□□□ 1.01
RCC2-202ENST00000375436 CEP164Q9UPV0 1460 aa21.34■■□□□ 1.01
RCC2-202ENST00000375436 RGL3Q3MIN7 710 aa21.31■■□□□ 1
RCC2-202ENST00000375436 CCDC136Q96JN2 1154 aa21.3■■□□□ 1
RCC2-202ENST00000375436 SLC24A1O60721 1099 aa21.29■■□□□ 1
RCC2-202ENST00000375436 ANP32AP39687 249 aaKnown RBP21.28■■□□□ 1
RCC2-202ENST00000375436 SYNJ1O43426 1573 aa21.27■■□□□ 1
RCC2-202ENST00000375436 PLPPR3Q6T4P5 718 aa21.26■□□□□ 0.99
RCC2-202ENST00000375436 CC2D2AQ9P2K1 1620 aa21.23■□□□□ 0.99
RCC2-202ENST00000375436 EIF4G2P78344 907 aaKnown RBP eCLIP21.23■□□□□ 0.99
RCC2-202ENST00000375436 RAPGEF2Q9Y4G8 1499 aa21.22■□□□□ 0.99
RCC2-202ENST00000375436 KCNH8Q96L42 1107 aa21.22■□□□□ 0.99
RCC2-202ENST00000375436 EIF5BO60841 1220 aaKnown RBP21.21■□□□□ 0.99
RCC2-202ENST00000375436 FOXD1Q16676 465 aa21.21■□□□□ 0.99
RCC2-202ENST00000375436 ARXQ96QS3 562 aa21.21■□□□□ 0.99
RCC2-202ENST00000375436 VPS8Q8N3P4 1428 aa21.19■□□□□ 0.98
RCC2-202ENST00000375436 ANP32EQ9BTT0 268 aa21.14■□□□□ 0.98
RCC2-202ENST00000375436 CFTRP13569 1480 aa21.13■□□□□ 0.97
RCC2-202ENST00000375436 CADPSQ9ULU8 1353 aa21.13■□□□□ 0.97
RCC2-202ENST00000375436 TSPY4P0CV99 314 aa21.13■□□□□ 0.97
RCC2-202ENST00000375436 TSPY10P0CW01 314 aa21.13■□□□□ 0.97
RCC2-202ENST00000375436 CHMP7Q8WUX9 453 aaPredicted RBP21.13■□□□□ 0.97
RCC2-202ENST00000375436 B4GALNT3Q6L9W6 998 aa21.1■□□□□ 0.97
RCC2-202ENST00000375436 RTN4Q9NQC3 1192 aaKnown RBP21.09■□□□□ 0.97
RCC2-202ENST00000375436 CCNB3Q8WWL7 1395 aa21.07■□□□□ 0.96
RCC2-202ENST00000375436 KIF27Q86VH2 1401 aa21.07■□□□□ 0.96
RCC2-202ENST00000375436 TOP2BQ02880 1626 aa21.06■□□□□ 0.96
RCC2-202ENST00000375436 ZBTB47Q9UFB7 747 aaPredicted RBP21.01■□□□□ 0.95
RCC2-202ENST00000375436 CUX1P39880 1505 aa21■□□□□ 0.95
RCC2-202ENST00000375436 CFDP1Q9UEE9 299 aaPredicted RBP20.99■□□□□ 0.95
RCC2-202ENST00000375436 PLEKHG5O94827 1062 aa20.98■□□□□ 0.95
RCC2-202ENST00000375436 CUX2O14529 1486 aa20.95■□□□□ 0.94
RCC2-202ENST00000375436 NEUROD2Q15784 382 aa20.94■□□□□ 0.94
RCC2-202ENST00000375436 CARD11Q9BXL7 1154 aa20.94■□□□□ 0.94
RCC2-202ENST00000375436 WDR43Q15061 677 aaKnown RBP eCLIP20.94■□□□□ 0.94
RCC2-202ENST00000375436 BIVM-ERCC5R4GMW8 1640 aa20.93■□□□□ 0.94
RCC2-202ENST00000375436 TSHZ2Q9NRE2 1034 aa20.93■□□□□ 0.94
RCC2-202ENST00000375436 CARMIL1Q5VZK9 1371 aa20.93■□□□□ 0.94
RCC2-202ENST00000375436 FANCD2Q9BXW9 1451 aa20.92■□□□□ 0.94
RCC2-202ENST00000375436 KIF21BO75037 1637 aa20.91■□□□□ 0.94
RCC2-202ENST00000375436 RAB3GAP2Q9H2M9 1393 aa20.91■□□□□ 0.94
RCC2-202ENST00000375436 TNNT2P45379 298 aaPredicted RBP20.89■□□□□ 0.94
RCC2-202ENST00000375436 STAG3Q9UJ98 1225 aa20.89■□□□□ 0.94
RCC2-202ENST00000375436 NESP48681 1621 aa20.89■□□□□ 0.93
RCC2-202ENST00000375436 CC2D1BQ5T0F9 858 aaKnown RBP20.88■□□□□ 0.93
RCC2-202ENST00000375436 RBM19Q9Y4C8 960 aaKnown RBP20.88■□□□□ 0.93
RCC2-202ENST00000375436 PLEKHD1A6NEE1 506 aa20.88■□□□□ 0.93
RCC2-202ENST00000375436 DHX57Q6P158 1386 aaKnown RBP20.87■□□□□ 0.93
RCC2-202ENST00000375436 HSPA5P11021 654 aaKnown RBP20.87■□□□□ 0.93
RCC2-202ENST00000375436 NEFMP07197 916 aa20.87■□□□□ 0.93
RCC2-202ENST00000375436 LAS1LQ9Y4W2 734 aaKnown RBP20.85■□□□□ 0.93
RCC2-202ENST00000375436 DNAJC5BQ9UF47 199 aa20.84■□□□□ 0.93
RCC2-202ENST00000375436 TDRD9Q8NDG6 1382 aaKnown RBP20.84■□□□□ 0.93
RCC2-202ENST00000375436 FGD5Q6ZNL6 1462 aa20.83■□□□□ 0.92
RCC2-202ENST00000375436 DCAF11Q8TEB1 546 aa20.82■□□□□ 0.92
RCC2-202ENST00000375436 RGS3P49796 1198 aa20.8■□□□□ 0.92
RCC2-202ENST00000375436 HSP90AA1P07900 732 aaKnown RBP20.79■□□□□ 0.92
RCC2-202ENST00000375436 PRDM2Q13029 1718 aa20.77■□□□□ 0.92
RCC2-202ENST00000375436 SETD5Q9C0A6 1442 aa20.76■□□□□ 0.91
RCC2-202ENST00000375436 ARAP1Q96P48 1450 aa20.75■□□□□ 0.91
RCC2-202ENST00000375436 PPM1GO15355 546 aaPredicted RBP20.74■□□□□ 0.91
RCC2-202ENST00000375436 PPP1R15AO75807 674 aaPredicted RBP20.73■□□□□ 0.91
RCC2-202ENST00000375436 PRXQ9BXM0 1461 aa20.73■□□□□ 0.91
RCC2-202ENST00000375436 PDS5BQ9NTI5 1447 aa20.73■□□□□ 0.91
RCC2-202ENST00000375436 PPP4R2Q9NY27 417 aa20.72■□□□□ 0.91
RCC2-202ENST00000375436 NPM1P06748 294 aaKnown RBP eCLIP20.71■□□□□ 0.91
RCC2-202ENST00000375436 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.71■□□□□ 0.91
RCC2-202ENST00000375436 ERICH3Q5RHP9 1530 aa20.69■□□□□ 0.9
RCC2-202ENST00000375436 PKD2Q13563 968 aa20.69■□□□□ 0.9
RCC2-202ENST00000375436 L3MBTL2Q969R5 705 aa20.69■□□□□ 0.9
RCC2-202ENST00000375436 RAD54L2Q9Y4B4 1467 aa20.69■□□□□ 0.9
RCC2-202ENST00000375436 FHOD3Q2V2M9 1422 aa20.69■□□□□ 0.9
RCC2-202ENST00000375436 IGF1RP08069 1367 aa20.68■□□□□ 0.9
RCC2-202ENST00000375436 FRAT1Q92837 279 aaPredicted RBP20.67■□□□□ 0.9
RCC2-202ENST00000375436 KNSTRNQ9Y448 316 aa20.67■□□□□ 0.9
RCC2-202ENST00000375436 TOPBP1Q92547 1522 aa20.66■□□□□ 0.9
RCC2-202ENST00000375436 ESF1Q9H501 851 aaKnown RBP20.66■□□□□ 0.9
RCC2-202ENST00000375436 UPF2Q9HAU5 1272 aaKnown RBP20.66■□□□□ 0.9
RCC2-202ENST00000375436 LAMC3Q9Y6N6 1575 aa20.66■□□□□ 0.9
RCC2-202ENST00000375436 SAFB2Q14151 953 aaKnown RBP eCLIP20.65■□□□□ 0.9
RCC2-202ENST00000375436 MPHOSPH9Q99550 1183 aa20.64■□□□□ 0.9
RCC2-202ENST00000375436 DNMBPQ6XZF7 1577 aa20.64■□□□□ 0.9
RCC2-202ENST00000375436 POLA1P09884 1462 aaPredicted RBP20.61■□□□□ 0.89
RCC2-202ENST00000375436 FHAD1B1AJZ9 1412 aa20.6■□□□□ 0.89
RCC2-202ENST00000375436 DEKP35659 375 aaKnown RBP20.59■□□□□ 0.89
RCC2-202ENST00000375436 ARHGAP35Q9NRY4 1499 aa20.58■□□□□ 0.89
RCC2-202ENST00000375436 ZBTB7CA1YPR0 619 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms