RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 NOM1Q5C9Z4 860 aaKnown RBP7.75□□□□□ -1.17
SCN2A-202ENST00000375427 ARID3AQ99856 593 aa7.75□□□□□ -1.17
SCN2A-202ENST00000375427 RTN4Q9NQC3 1192 aaKnown RBP7.74□□□□□ -1.17
SCN2A-202ENST00000375427 HTATSF1O43719 755 aaKnown RBP7.74□□□□□ -1.17
SCN2A-202ENST00000375427 BCCIPQ9P287 314 aaKnown RBP eCLIP7.73□□□□□ -1.17
SCN2A-202ENST00000375427 HSP90B1P14625 803 aaKnown RBP7.73□□□□□ -1.17
SCN2A-202ENST00000375427 PATL2C9JE40 543 aaKnown RBP7.72□□□□□ -1.17
SCN2A-202ENST00000375427 HSP90AA2PQ14568 343 aaPredicted RBP7.72□□□□□ -1.17
SCN2A-202ENST00000375427 HOMEZQ8IX15 550 aa7.71□□□□□ -1.17
SCN2A-202ENST00000375427 TULP1O00294 542 aaPredicted RBP7.71□□□□□ -1.17
SCN2A-202ENST00000375427 SEPT11Q9NVA2 429 aaKnown RBP7.7□□□□□ -1.18
SCN2A-202ENST00000375427 DYDC1Q8WWB3 177 aa7.7□□□□□ -1.18
SCN2A-202ENST00000375427 CLGNO14967 610 aa7.7□□□□□ -1.18
SCN2A-202ENST00000375427 TSPYL1Q9H0U9 437 aa7.69□□□□□ -1.18
SCN2A-202ENST00000375427 CCDC191Q8NCU4 936 aa7.69□□□□□ -1.18
SCN2A-202ENST00000375427 PLCB2Q00722 1185 aa7.68□□□□□ -1.18
SCN2A-202ENST00000375427 GON4LQ3T8J9 2241 aa7.68□□□□□ -1.18
SCN2A-202ENST00000375427 MAP7D2Q96T17 732 aa7.68□□□□□ -1.18
SCN2A-202ENST00000375427 NEXNQ0ZGT2 675 aa7.67□□□□□ -1.18
SCN2A-202ENST00000375427 DRC7Q8IY82 874 aa7.67□□□□□ -1.18
SCN2A-202ENST00000375427 RDXP35241 583 aaKnown RBP7.66□□□□□ -1.18
SCN2A-202ENST00000375427 MYH16Q9H6N6 1097 aa7.66□□□□□ -1.18
SCN2A-202ENST00000375427 GPS2Q13227 327 aa7.66□□□□□ -1.18
SCN2A-202ENST00000375427 VSIG10Q8N0Z9 540 aa7.66□□□□□ -1.18
SCN2A-202ENST00000375427 HMGN5P82970 282 aaKnown RBP7.65□□□□□ -1.18
SCN2A-202ENST00000375427 CLSTN1O94985 981 aa7.64□□□□□ -1.19
SCN2A-202ENST00000375427 ZNF771Q7L3S4 317 aaPredicted RBP7.64□□□□□ -1.19
SCN2A-202ENST00000375427 TEX35Q5T0J7 233 aa7.63□□□□□ -1.19
SCN2A-202ENST00000375427 UBTFP17480 764 aaKnown RBP7.63□□□□□ -1.19
SCN2A-202ENST00000375427 PPP1R1BQ9UD71 204 aaPredicted RBP7.63□□□□□ -1.19
SCN2A-202ENST00000375427 CASC1Q6TDU7 716 aa7.63□□□□□ -1.19
SCN2A-202ENST00000375427 CCDC136Q96JN2 1154 aa7.62□□□□□ -1.19
SCN2A-202ENST00000375427 RSPH6AQ9H0K4 717 aa7.62□□□□□ -1.19
SCN2A-202ENST00000375427 HMGB1P1B2RPK0 211 aaPredicted RBP7.62□□□□□ -1.19
SCN2A-202ENST00000375427 PHF14O94880 888 aa7.62□□□□□ -1.19
SCN2A-202ENST00000375427 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.62□□□□□ -1.19
SCN2A-202ENST00000375427 MNS1Q8NEH6 495 aa7.62□□□□□ -1.19
SCN2A-202ENST00000375427 CHIC1Q5VXU3 224 aa7.61□□□□□ -1.19
SCN2A-202ENST00000375427 VGFO15240 615 aaPredicted RBP7.61□□□□□ -1.19
SCN2A-202ENST00000375427 USP8P40818 1118 aa7.61□□□□□ -1.19
SCN2A-202ENST00000375427 INCENPQ9NQS7 918 aa7.61□□□□□ -1.19
SCN2A-202ENST00000375427 CHMP3Q9Y3E7 222 aa7.61□□□□□ -1.19
SCN2A-202ENST00000375427 PKNOX2Q96KN3 472 aa7.6□□□□□ -1.19
SCN2A-202ENST00000375427 KRI1Q8N9T8 703 aaKnown RBP7.59□□□□□ -1.19
SCN2A-202ENST00000375427 ACIN1Q9UKV3 1341 aaKnown RBP7.59□□□□□ -1.19
SCN2A-202ENST00000375427 CWC15Q9P013 229 aaKnown RBP7.59□□□□□ -1.19
SCN2A-202ENST00000375427 AXDND1Q5T1B0 1012 aaPredicted RBP7.58□□□□□ -1.2
SCN2A-202ENST00000375427 CCDC70Q6NSX1 233 aa7.58□□□□□ -1.2
SCN2A-202ENST00000375427 PAF1Q8N7H5 531 aa7.58□□□□□ -1.2
SCN2A-202ENST00000375427 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.57□□□□□ -1.2
SCN2A-202ENST00000375427 CEP89Q96ST8 783 aa7.57□□□□□ -1.2
SCN2A-202ENST00000375427 TMX4Q9H1E5 349 aaPredicted RBP7.57□□□□□ -1.2
SCN2A-202ENST00000375427 DCTN1Q14203 1278 aa7.57□□□□□ -1.2
SCN2A-202ENST00000375427 TPM4P67936 248 aa7.57□□□□□ -1.2
SCN2A-202ENST00000375427 FKBP8Q14318 412 aa7.56□□□□□ -1.2
SCN2A-202ENST00000375427 CCDC9Q9Y3X0 531 aaKnown RBP7.56□□□□□ -1.2
SCN2A-202ENST00000375427 CALD1Q05682 793 aaKnown RBP7.56□□□□□ -1.2
SCN2A-202ENST00000375427 CCDC175P0C221 793 aa7.55□□□□□ -1.2
SCN2A-202ENST00000375427 HSP90AB3PQ58FF7 597 aa7.55□□□□□ -1.2
SCN2A-202ENST00000375427 ZRSR2Q15696 482 aaKnown RBP7.55□□□□□ -1.2
SCN2A-202ENST00000375427 CCDC66A2RUB6 948 aa7.54□□□□□ -1.2
SCN2A-202ENST00000375427 CDR1P51861 262 aa7.54□□□□□ -1.2
SCN2A-202ENST00000375427 ARGLU1Q9NWB6 273 aaPredicted RBP7.54□□□□□ -1.2
SCN2A-202ENST00000375427 FBXO3Q9UK99 471 aa7.54□□□□□ -1.2
SCN2A-202ENST00000375427 PLCD4Q9BRC7 762 aa7.54□□□□□ -1.2
SCN2A-202ENST00000375427 ISY1Q9ULR0 285 aaKnown RBP7.54□□□□□ -1.2
SCN2A-202ENST00000375427 H0YHG0 523 aa7.54□□□□□ -1.2
SCN2A-202ENST00000375427 PDCL3Q9H2J4 239 aa7.54□□□□□ -1.2
SCN2A-202ENST00000375427 PAIP2Q9BPZ3 127 aaKnown RBP7.53□□□□□ -1.2
SCN2A-202ENST00000375427 TAF3Q5VWG9 929 aa7.53□□□□□ -1.2
SCN2A-202ENST00000375427 CAGE1Q8TC20 777 aa7.53□□□□□ -1.2
SCN2A-202ENST00000375427 PES1O00541 588 aaKnown RBP7.53□□□□□ -1.2
SCN2A-202ENST00000375427 ITGAEP38570 1179 aa7.52□□□□□ -1.21
SCN2A-202ENST00000375427 NISCHQ9Y2I1 1504 aa7.52□□□□□ -1.21
SCN2A-202ENST00000375427 TPM3P06753 285 aa7.52□□□□□ -1.21
SCN2A-202ENST00000375427 TPRNQ4KMQ1 711 aa7.52□□□□□ -1.21
SCN2A-202ENST00000375427 PSMD1Q99460 953 aa7.51□□□□□ -1.21
SCN2A-202ENST00000375427 PDE4CQ08493 712 aa7.51□□□□□ -1.21
SCN2A-202ENST00000375427 CREBRFQ8IUR6 639 aa7.51□□□□□ -1.21
SCN2A-202ENST00000375427 ZBTB7CA1YPR0 619 aa7.51□□□□□ -1.21
SCN2A-202ENST00000375427 TRIM41Q8WV44 630 aa7.51□□□□□ -1.21
SCN2A-202ENST00000375427 FYB1O15117 783 aa7.5□□□□□ -1.21
SCN2A-202ENST00000375427 SSR1P43307 286 aaKnown RBP7.5□□□□□ -1.21
SCN2A-202ENST00000375427 TCHPQ9BT92 498 aa7.5□□□□□ -1.21
SCN2A-202ENST00000375427 RASSF8Q8NHQ8 419 aa7.5□□□□□ -1.21
SCN2A-202ENST00000375427 DEKP35659 375 aaKnown RBP7.5□□□□□ -1.21
SCN2A-202ENST00000375427 CCDC34Q96HJ3 373 aa7.5□□□□□ -1.21
SCN2A-202ENST00000375427 SYAP1Q96A49 352 aaPredicted RBP7.49□□□□□ -1.21
SCN2A-202ENST00000375427 AK7Q96M32 723 aa7.49□□□□□ -1.21
SCN2A-202ENST00000375427 CFAP57Q96MR6 1250 aa7.49□□□□□ -1.21
SCN2A-202ENST00000375427 DEF6Q9H4E7 631 aa7.49□□□□□ -1.21
SCN2A-202ENST00000375427 GOLGA6L7A0A1B0GV03 622 aa7.48□□□□□ -1.21
SCN2A-202ENST00000375427 CCAR1Q8IX12 1150 aaKnown RBP7.48□□□□□ -1.21
SCN2A-202ENST00000375427 SETSIPP0DME0 302 aa7.48□□□□□ -1.21
SCN2A-202ENST00000375427 NOP58Q9Y2X3 529 aaKnown RBP7.48□□□□□ -1.21
SCN2A-202ENST00000375427 CLASRPQ8N2M8 674 aaKnown RBP7.48□□□□□ -1.21
SCN2A-202ENST00000375427 GIMAP7Q8NHV1 300 aa7.48□□□□□ -1.21
SCN2A-202ENST00000375427 HSP90AB1P08238 724 aaKnown RBP7.48□□□□□ -1.21
SCN2A-202ENST00000375427 SPATA24Q86W54 205 aa7.48□□□□□ -1.21
SCN2A-202ENST00000375427 CC2D1BQ5T0F9 858 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms