RNA–Protein interactions for RNA: ENST00000375120.3

OTUD3-201, Transcript of OTU deubiquitinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene OTUD3, Length 6,397 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUD3-201ENST00000375120 LAS1LQ9Y4W2 734 aaKnown RBP20.62■□□□□ 0.89
OTUD3-201ENST00000375120 PPP4R2Q9NY27 417 aa20.61■□□□□ 0.89
OTUD3-201ENST00000375120 PPM1GO15355 546 aaPredicted RBP20.61■□□□□ 0.89
OTUD3-201ENST00000375120 CHGAP10645 457 aaKnown RBP20.6■□□□□ 0.89
OTUD3-201ENST00000375120 TRIM44Q96DX7 344 aaPredicted RBP20.6■□□□□ 0.89
OTUD3-201ENST00000375120 MTUS2Q5JR59 1369 aa20.57■□□□□ 0.88
OTUD3-201ENST00000375120 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.54■□□□□ 0.889e-6■□□□□ 10.7
OTUD3-201ENST00000375120 RRP7BPQ9NSQ0 103 aa20.53■□□□□ 0.88
OTUD3-201ENST00000375120 ERICH6BQ5W0A0 696 aa20.53■□□□□ 0.88
OTUD3-201ENST00000375120 GOLGA3Q08378 1498 aa20.52■□□□□ 0.88
OTUD3-201ENST00000375120 RBM19Q9Y4C8 960 aaKnown RBP20.51■□□□□ 0.87
OTUD3-201ENST00000375120 DEKP35659 375 aaKnown RBP20.49■□□□□ 0.87
OTUD3-201ENST00000375120 B4GALNT3Q6L9W6 998 aa20.49■□□□□ 0.87
OTUD3-201ENST00000375120 NAP1L5Q96NT1 182 aaPredicted RBP20.45■□□□□ 0.86
OTUD3-201ENST00000375120 SIN3AQ96ST3 1273 aa20.45■□□□□ 0.86
OTUD3-201ENST00000375120 GOLGA6L22H0YM25 854 aa20.44■□□□□ 0.86
OTUD3-201ENST00000375120 EEA1Q15075 1411 aa20.44■□□□□ 0.86
OTUD3-201ENST00000375120 MYH16Q9H6N6 1097 aa20.43■□□□□ 0.86
OTUD3-201ENST00000375120 TNIKQ9UKE5 1360 aa20.42■□□□□ 0.86
OTUD3-201ENST00000375120 TSPY4P0CV99 314 aa20.41■□□□□ 0.86
OTUD3-201ENST00000375120 TSPY10P0CW01 314 aa20.41■□□□□ 0.86
OTUD3-201ENST00000375120 NCLP19338 710 aaKnown RBP20.4■□□□□ 0.86
OTUD3-201ENST00000375120 RGS3P49796 1198 aa20.38■□□□□ 0.85
OTUD3-201ENST00000375120 RSF1Q96T23 1441 aaPredicted RBP20.37■□□□□ 0.85
OTUD3-201ENST00000375120 STAG3Q9UJ98 1225 aa20.36■□□□□ 0.85
OTUD3-201ENST00000375120 TSHZ2Q9NRE2 1034 aa20.35■□□□□ 0.85
OTUD3-201ENST00000375120 PTMAP06454 111 aaKnown RBP20.33■□□□□ 0.85
OTUD3-201ENST00000375120 TNNT2P45379 298 aaPredicted RBP20.33■□□□□ 0.84
OTUD3-201ENST00000375120 DNTTIP2Q5QJE6 756 aaKnown RBP20.29■□□□□ 0.84
OTUD3-201ENST00000375120 CCER2I3L3R5 266 aa20.28■□□□□ 0.84
OTUD3-201ENST00000375120 CARD11Q9BXL7 1154 aa20.27■□□□□ 0.84
OTUD3-201ENST00000375120 RGL3Q3MIN7 710 aa20.27■□□□□ 0.83
OTUD3-201ENST00000375120 KNSTRNQ9Y448 316 aa20.25■□□□□ 0.83
OTUD3-201ENST00000375120 CEP164Q9UPV0 1460 aa20.24■□□□□ 0.83
OTUD3-201ENST00000375120 FTSJ3Q8IY81 847 aaKnown RBP20.23■□□□□ 0.83
OTUD3-201ENST00000375120 WRNQ14191 1432 aaPredicted RBP eCLIP20.22■□□□□ 0.83
OTUD3-201ENST00000375120 ESF1Q9H501 851 aaKnown RBP20.21■□□□□ 0.83
OTUD3-201ENST00000375120 TPRNQ4KMQ1 711 aa20.21■□□□□ 0.83
OTUD3-201ENST00000375120 NEUROD2Q15784 382 aa20.2■□□□□ 0.82
OTUD3-201ENST00000375120 FRAT1Q92837 279 aaPredicted RBP20.19■□□□□ 0.82
OTUD3-201ENST00000375120 CCNB3Q8WWL7 1395 aa20.17■□□□□ 0.82
OTUD3-201ENST00000375120 CFAP53Q96M91 514 aa20.16■□□□□ 0.82
OTUD3-201ENST00000375120 L1TD1Q5T7N2 865 aaKnown RBP20.14■□□□□ 0.81
OTUD3-201ENST00000375120 CC2D1BQ5T0F9 858 aaKnown RBP20.13■□□□□ 0.81
OTUD3-201ENST00000375120 CDCA8Q53HL2 280 aa20.13■□□□□ 0.81
OTUD3-201ENST00000375120 CASC1Q6TDU7 716 aa20.13■□□□□ 0.81
OTUD3-201ENST00000375120 HSP90AB1P08238 724 aaKnown RBP20.13■□□□□ 0.81
OTUD3-201ENST00000375120 TIMELESSQ9UNS1 1208 aa20.12■□□□□ 0.81
OTUD3-201ENST00000375120 SENP3Q9H4L4 574 aaPredicted RBP20.11■□□□□ 0.81
OTUD3-201ENST00000375120 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.11■□□□□ 0.81
OTUD3-201ENST00000375120 PLCB2Q00722 1185 aa20.1■□□□□ 0.81
OTUD3-201ENST00000375120 SPRYD3Q8NCJ5 442 aa20.08■□□□□ 0.8
OTUD3-201ENST00000375120 HSPA5P11021 654 aaKnown RBP20.07■□□□□ 0.8
OTUD3-201ENST00000375120 ARID4BQ4LE39 1312 aaPredicted RBP20.06■□□□□ 0.8
OTUD3-201ENST00000375120 PLPPR3Q6T4P5 718 aa20.05■□□□□ 0.8
OTUD3-201ENST00000375120 HSCBQ8IWL3 235 aa20.05■□□□□ 0.8
OTUD3-201ENST00000375120 CFDP1Q9UEE9 299 aaPredicted RBP20.05■□□□□ 0.8
OTUD3-201ENST00000375120 ZRSR1Q15695 479 aaKnown RBP20.04■□□□□ 0.8
OTUD3-201ENST00000375120 KIF27Q86VH2 1401 aa20.04■□□□□ 0.8
OTUD3-201ENST00000375120 MAPK8IP3Q9UPT6 1336 aa20.02■□□□□ 0.8
OTUD3-201ENST00000375120 MSNP26038 577 aaKnown RBP20.02■□□□□ 0.8
OTUD3-201ENST00000375120 IPO9Q96P70 1041 aaKnown RBP20.02■□□□□ 0.79
OTUD3-201ENST00000375120 SOGA1O94964 1423 aa20.01■□□□□ 0.79
OTUD3-201ENST00000375120 PLEKHD1A6NEE1 506 aa20■□□□□ 0.79
OTUD3-201ENST00000375120 NPM1P06748 294 aaKnown RBP eCLIP20■□□□□ 0.79
OTUD3-201ENST00000375120 SETD5Q9C0A6 1442 aa20■□□□□ 0.79
OTUD3-201ENST00000375120 TCERG1O14776 1098 aaKnown RBP19.99■□□□□ 0.79
OTUD3-201ENST00000375120 RB1CC1Q8TDY2 1594 aa19.99■□□□□ 0.79
OTUD3-201ENST00000375120 CHMP7Q8WUX9 453 aaPredicted RBP19.99■□□□□ 0.79
OTUD3-201ENST00000375120 MS4A1P11836 297 aa19.96■□□□□ 0.79
OTUD3-201ENST00000375120 CDK11BP21127 795 aaKnown RBP19.95■□□□□ 0.78
OTUD3-201ENST00000375120 RCAN3Q9UKA8 241 aa19.95■□□□□ 0.78
OTUD3-201ENST00000375120 SLKQ9H2G2 1235 aaPredicted RBP19.95■□□□□ 0.78
OTUD3-201ENST00000375120 NUDCQ9Y266 331 aa19.95■□□□□ 0.78
OTUD3-201ENST00000375120 VPS8Q8N3P4 1428 aa19.95■□□□□ 0.78
OTUD3-201ENST00000375120 GZF1Q9H116 711 aaPredicted RBP19.94■□□□□ 0.78
OTUD3-201ENST00000375120 KCNH8Q96L42 1107 aa19.94■□□□□ 0.78
OTUD3-201ENST00000375120 PNNQ9H307 717 aaKnown RBP19.94■□□□□ 0.78
OTUD3-201ENST00000375120 KANK4Q5T7N3 995 aaPredicted RBP19.93■□□□□ 0.78
OTUD3-201ENST00000375120 DCAF11Q8TEB1 546 aa19.92■□□□□ 0.78
OTUD3-201ENST00000375120 ZBTB7CA1YPR0 619 aa19.91■□□□□ 0.78
OTUD3-201ENST00000375120 CHMP4BQ9H444 224 aaKnown RBP19.91■□□□□ 0.78
OTUD3-201ENST00000375120 TMF1P82094 1093 aa19.9■□□□□ 0.78
OTUD3-201ENST00000375120 CHAF1AQ13111 956 aaPredicted RBP19.9■□□□□ 0.78
OTUD3-201ENST00000375120 RAB3GAP2Q9H2M9 1393 aa19.89■□□□□ 0.77
OTUD3-201ENST00000375120 U2SURPO15042 1029 aaKnown RBP19.89■□□□□ 0.77
OTUD3-201ENST00000375120 FHAD1B1AJZ9 1412 aa19.87■□□□□ 0.77
OTUD3-201ENST00000375120 PPP1R15AO75807 674 aaPredicted RBP19.86■□□□□ 0.77
OTUD3-201ENST00000375120 PLEKHG5O94827 1062 aa19.86■□□□□ 0.77
OTUD3-201ENST00000375120 C14orf37Q86TY3 774 aa19.86■□□□□ 0.77
OTUD3-201ENST00000375120 ARID3AQ99856 593 aa19.84■□□□□ 0.77
OTUD3-201ENST00000375120 KTN1Q86UP2 1357 aaKnown RBP19.84■□□□□ 0.77
OTUD3-201ENST00000375120 GOLGA6L6A8MZA4 724 aa19.84■□□□□ 0.77
OTUD3-201ENST00000375120 FOXD1Q16676 465 aa19.83■□□□□ 0.77
OTUD3-201ENST00000375120 GBP4Q96PP9 640 aa19.83■□□□□ 0.77
OTUD3-201ENST00000375120 GOLGA6L3A6NEY3 463 aa19.83■□□□□ 0.76
OTUD3-201ENST00000375120 AMER1Q5JTC6 1135 aaPredicted RBP19.81■□□□□ 0.76
OTUD3-201ENST00000375120 BAZ1BQ9UIG0 1483 aaKnown RBP19.8■□□□□ 0.76
OTUD3-201ENST00000375120 GOLGA6L4A6NEF3 574 aa19.8■□□□□ 0.76
OTUD3-201ENST00000375120 NRDCO43847 1150 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms