RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 RASEFQ8IZ41 740 aa14.7□□□□□ -0.06
PMS1-202ENST00000374826 PELP1Q8IZL8 1130 aaKnown RBP14.7□□□□□ -0.06
PMS1-202ENST00000374826 KIF12Q96FN5 646 aa14.69□□□□□ -0.06
PMS1-202ENST00000374826 ASTLQ6HA08 431 aaPredicted RBP14.67□□□□□ -0.06
PMS1-202ENST00000374826 ATMINO43313 823 aaPredicted RBP14.65□□□□□ -0.06
PMS1-202ENST00000374826 ZBTB47Q9UFB7 747 aaPredicted RBP14.64□□□□□ -0.07
PMS1-202ENST00000374826 POTEB2H3BUK9 544 aa14.62□□□□□ -0.07
PMS1-202ENST00000374826 MAP3K13O43283 966 aa14.6□□□□□ -0.07
PMS1-202ENST00000374826 NUBP1P53384 320 aa14.59□□□□□ -0.07
PMS1-202ENST00000374826 C7P10643 843 aa14.56□□□□□ -0.08
PMS1-202ENST00000374826 SLC39A7Q92504 469 aa14.56□□□□□ -0.08
PMS1-202ENST00000374826 OTUD5Q96G74 571 aa14.55□□□□□ -0.08
PMS1-202ENST00000374826 METRNQ9UJH8 293 aa14.54□□□□□ -0.08
PMS1-202ENST00000374826 ATN1P54259 1190 aaPredicted RBP14.53□□□□□ -0.08
PMS1-202ENST00000374826 FBXO3Q9UK99 471 aa14.53□□□□□ -0.08
PMS1-202ENST00000374826 TRPC6Q9Y210 931 aa14.52□□□□□ -0.09
PMS1-202ENST00000374826 BMP2KQ9NSY1 1161 aaPredicted RBP14.5□□□□□ -0.09
PMS1-202ENST00000374826 SGIP1Q9BQI5 828 aa14.48□□□□□ -0.09
PMS1-202ENST00000374826 TIE1P35590 1138 aa14.47□□□□□ -0.09
PMS1-202ENST00000374826 FAM212AQ96EL1 285 aa14.45□□□□□ -0.1
PMS1-202ENST00000374826 PCDHB13Q9Y5F0 798 aa14.44□□□□□ -0.1
PMS1-202ENST00000374826 POTEJP0CG39 1038 aa14.41□□□□□ -0.1
PMS1-202ENST00000374826 TTLL13PA6NNM8 815 aa14.4□□□□□ -0.1
PMS1-202ENST00000374826 DCAF8Q5TAQ9 597 aa14.38□□□□□ -0.11
PMS1-202ENST00000374826 IFNL1Q8IU54 200 aa14.37□□□□□ -0.11
PMS1-202ENST00000374826 POTEFA5A3E0 1075 aa14.36□□□□□ -0.11
PMS1-202ENST00000374826 VASPP50552 380 aaPredicted RBP14.34□□□□□ -0.11
PMS1-202ENST00000374826 MAMSTRQ6ZN01 415 aa14.34□□□□□ -0.11
PMS1-202ENST00000374826 KLHL34Q8N239 644 aa14.31□□□□□ -0.12
PMS1-202ENST00000374826 TRIM35Q9UPQ4 493 aa14.3□□□□□ -0.12
PMS1-202ENST00000374826 PLSCR2Q9NRY7 297 aa14.29□□□□□ -0.12
PMS1-202ENST00000374826 PYGBP11216 843 aa14.28□□□□□ -0.12
PMS1-202ENST00000374826 COLQQ9Y215 455 aaPredicted RBP14.28□□□□□ -0.12
PMS1-202ENST00000374826 SEC24BO95487 1268 aa14.27□□□□□ -0.13
PMS1-202ENST00000374826 IER5LQ5T953 404 aa14.26□□□□□ -0.13
PMS1-202ENST00000374826 TMEM106CQ9BVX2 250 aa14.26□□□□□ -0.13
PMS1-202ENST00000374826 SCUBE2Q9NQ36 999 aa14.24□□□□□ -0.13
PMS1-202ENST00000374826 GSE1Q14687 1217 aa14.2□□□□□ -0.14
PMS1-202ENST00000374826 PCDHB8Q9UN66 801 aa14.18□□□□□ -0.14
PMS1-202ENST00000374826 POTEMA6NI47 508 aa14.12□□□□□ -0.15
PMS1-202ENST00000374826 CHRM1P11229 460 aaPredicted RBP14.12□□□□□ -0.15
PMS1-202ENST00000374826 IFNLR1Q8IU57 520 aaPredicted RBP14.11□□□□□ -0.15
PMS1-202ENST00000374826 IRX5P78411 483 aaPredicted RBP14.1□□□□□ -0.15
PMS1-202ENST00000374826 POTEGQ6S5H5 508 aa14.09□□□□□ -0.15
PMS1-202ENST00000374826 PLCG2P16885 1265 aa14.08□□□□□ -0.16
PMS1-202ENST00000374826 FAM163AQ96GL9 167 aaPredicted RBP14.08□□□□□ -0.16
PMS1-202ENST00000374826 ZNF467Q7Z7K2 595 aaPredicted RBP14.07□□□□□ -0.16
PMS1-202ENST00000374826 SPOCK2Q92563 424 aa14.07□□□□□ -0.16
PMS1-202ENST00000374826 OCEL1Q9H607 264 aa14.05□□□□□ -0.16
PMS1-202ENST00000374826 LCE2DQ5TA82 110 aaPredicted RBP14.03□□□□□ -0.16
PMS1-202ENST00000374826 CIZ1Q9ULV3 898 aaPredicted RBP13.98□□□□□ -0.17
PMS1-202ENST00000374826 SLAIN1Q8ND83 568 aa13.97□□□□□ -0.17
PMS1-202ENST00000374826 PSEN1P49768 467 aa13.96□□□□□ -0.17
PMS1-202ENST00000374826 PCDH10Q9P2E7 1040 aa13.93□□□□□ -0.18
PMS1-202ENST00000374826 GOLGA2Q08379 1002 aa13.92□□□□□ -0.18
PMS1-202ENST00000374826 MKRN3Q13064 507 aaKnown RBP13.92□□□□□ -0.18
PMS1-202ENST00000374826 PDAP1Q13442 181 aaKnown RBP13.89□□□□□ -0.19
PMS1-202ENST00000374826 PDCD7Q8N8D1 485 aaKnown RBP13.88□□□□□ -0.19
PMS1-202ENST00000374826 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.84□□□□□ -0.198e-9■■□□□ 11.4
PMS1-202ENST00000374826 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.84□□□□□ -0.19
PMS1-202ENST00000374826 L3MBTL3Q96JM7 780 aaPredicted RBP13.81□□□□□ -0.2
PMS1-202ENST00000374826 ST18O60284 1047 aa13.8□□□□□ -0.2
PMS1-202ENST00000374826 ILDR1Q86SU0 546 aaPredicted RBP13.79□□□□□ -0.2
PMS1-202ENST00000374826 TRIM41Q8WV44 630 aa13.79□□□□□ -0.2
PMS1-202ENST00000374826 CABP2Q9NPB3 220 aa13.78□□□□□ -0.2
PMS1-202ENST00000374826 SNPHO15079 494 aa13.73□□□□□ -0.21
PMS1-202ENST00000374826 C3orf67Q6ZVT6 689 aa13.73□□□□□ -0.21
PMS1-202ENST00000374826 DPY19L2Q6NUT2 758 aa13.72□□□□□ -0.21
PMS1-202ENST00000374826 CDAN1Q8IWY9 1227 aa13.69□□□□□ -0.22
PMS1-202ENST00000374826 TMEM121BQ9BXQ6 578 aaPredicted RBP13.66□□□□□ -0.22
PMS1-202ENST00000374826 EFCAB3Q8N7B9 438 aa13.63□□□□□ -0.23
PMS1-202ENST00000374826 BOLA1Q9Y3E2 137 aa13.63□□□□□ -0.23
PMS1-202ENST00000374826 RIOK3O14730 519 aaKnown RBP13.61□□□□□ -0.23
PMS1-202ENST00000374826 G3V3G9 751 aa13.6□□□□□ -0.23
PMS1-202ENST00000374826 RNF25Q96BH1 459 aaPredicted RBP13.6□□□□□ -0.23
PMS1-202ENST00000374826 MARVELD3Q96A59 401 aa13.57□□□□□ -0.24
PMS1-202ENST00000374826 VGFO15240 615 aaPredicted RBP13.55□□□□□ -0.24
PMS1-202ENST00000374826 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.54□□□□□ -0.24
PMS1-202ENST00000374826 ZFP91Q96JP5 570 aaPredicted RBP13.54□□□□□ -0.24
PMS1-202ENST00000374826 SOX12O15370 315 aa13.52□□□□□ -0.25
PMS1-202ENST00000374826 HOXB3P14651 431 aaPredicted RBP13.45□□□□□ -0.26
PMS1-202ENST00000374826 EMP3P54852 163 aa13.45□□□□□ -0.26
PMS1-202ENST00000374826 MS4A4AQ96JQ5 239 aa13.44□□□□□ -0.26
PMS1-202ENST00000374826 TAOK2Q9UL54 1235 aa13.43□□□□□ -0.26
PMS1-202ENST00000374826 PHF8Q9UPP1 1060 aa13.43□□□□□ -0.26
PMS1-202ENST00000374826 MICALL2Q8IY33 904 aa13.42□□□□□ -0.26
PMS1-202ENST00000374826 POTEB3A0JP26 581 aa13.39□□□□□ -0.27
PMS1-202ENST00000374826 FAM205CA6NFA0 338 aa13.39□□□□□ -0.27
PMS1-202ENST00000374826 POTEBQ6S5H4 581 aa13.39□□□□□ -0.27
PMS1-202ENST00000374826 BCL11BQ9C0K0 894 aaPredicted RBP13.38□□□□□ -0.27
PMS1-202ENST00000374826 TMEM92Q6UXU6 159 aa13.37□□□□□ -0.27
PMS1-202ENST00000374826 HS3ST6Q96QI5 342 aa13.37□□□□□ -0.27
PMS1-202ENST00000374826 ECM2O94769 699 aaPredicted RBP13.36□□□□□ -0.27
PMS1-202ENST00000374826 DOK7Q18PE1 504 aa13.36□□□□□ -0.27
PMS1-202ENST00000374826 SPNS2Q8IVW8 549 aa13.36□□□□□ -0.27
PMS1-202ENST00000374826 ZNF710Q8N1W2 664 aa13.36□□□□□ -0.27
PMS1-202ENST00000374826 NLRP6P59044 892 aa13.35□□□□□ -0.27
PMS1-202ENST00000374826 HOXB1P14653 301 aaPredicted RBP13.34□□□□□ -0.27
PMS1-202ENST00000374826 STK24Q9Y6E0 443 aa13.34□□□□□ -0.27
PMS1-202ENST00000374826 PKD2Q13563 968 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms